Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2124
         (704 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450...    29   2.4  
Z49936-3|CAD90174.1| 1000|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z49936-1|CAA90182.1|  930|Caenorhabditis elegans Hypothetical pr...    28   5.7  
AY834227-1|AAV91313.1|  984|Caenorhabditis elegans Toll and inte...    28   5.7  
AY834226-1|AAV91312.1|  931|Caenorhabditis elegans Toll and inte...    28   5.7  
U50300-6|AAC48109.1|  642|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450
           family protein 14A5 protein.
          Length = 492

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 252 YIVDLCVRLIIILLSFYVLAHKY*SGGFKMMHFANII 362
           +IV L V +I  ++SFY    KY  G F +  F N++
Sbjct: 4   FIVALSVFIISYVISFYWKVRKYPKGPFPLPFFGNLL 40


>Z49936-3|CAD90174.1| 1000|Caenorhabditis elegans Hypothetical
           protein F13B10.1c protein.
          Length = 1000

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 14/41 (34%), Positives = 16/41 (39%)
 Frame = +2

Query: 2   PLESKPTSSCPRXTLPTNERGLWREAWSHKNPTPQGSIGPA 124
           PL  K    CP    P     L+    S+  P P G I PA
Sbjct: 115 PLPPKSAPPCPTQPAPLTNGDLYPTILSNGTPIPNGRITPA 155


>Z49936-1|CAA90182.1|  930|Caenorhabditis elegans Hypothetical
           protein F13B10.1a protein.
          Length = 930

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 14/41 (34%), Positives = 16/41 (39%)
 Frame = +2

Query: 2   PLESKPTSSCPRXTLPTNERGLWREAWSHKNPTPQGSIGPA 124
           PL  K    CP    P     L+    S+  P P G I PA
Sbjct: 61  PLPPKSAPPCPTQPAPLTNGDLYPTILSNGTPIPNGRITPA 101


>AY834227-1|AAV91313.1|  984|Caenorhabditis elegans Toll and
           interleukin 1 receptordomain protein isoform c protein.
          Length = 984

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 14/41 (34%), Positives = 16/41 (39%)
 Frame = +2

Query: 2   PLESKPTSSCPRXTLPTNERGLWREAWSHKNPTPQGSIGPA 124
           PL  K    CP    P     L+    S+  P P G I PA
Sbjct: 115 PLPPKSAPPCPTQPAPLTNGDLYPTILSNGTPIPNGRITPA 155


>AY834226-1|AAV91312.1|  931|Caenorhabditis elegans Toll and
           interleukin 1 receptordomain protein isoform a protein.
          Length = 931

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 14/41 (34%), Positives = 16/41 (39%)
 Frame = +2

Query: 2   PLESKPTSSCPRXTLPTNERGLWREAWSHKNPTPQGSIGPA 124
           PL  K    CP    P     L+    S+  P P G I PA
Sbjct: 62  PLPPKSAPPCPTQPAPLTNGDLYPTILSNGTPIPNGRITPA 102


>U50300-6|AAC48109.1|  642|Caenorhabditis elegans Hypothetical
           protein R03H4.1 protein.
          Length = 642

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 5/33 (15%)
 Frame = -2

Query: 457 IARYPHYN----NGFLDY-IKNXKDIENLHLNR 374
           +  +P YN    N FL Y I+N  ++E+LHLNR
Sbjct: 531 LGSHPLYNINHLNTFLHYLIQNSDELESLHLNR 563


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,314,155
Number of Sequences: 27780
Number of extensions: 270006
Number of successful extensions: 558
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)