Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2123
         (699 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         314   2e-87
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         314   2e-87
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         314   2e-87
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          288   1e-79
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    26   1.3  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    25   3.0  
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    24   4.0  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  314 bits (770), Expect = 2e-87
 Identities = 153/193 (79%), Positives = 159/193 (82%)
 Frame = +3

Query: 33  GRDLTDYLMKILTERGSRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAASLEKSYE 212
           GRDLTDYLMKILTERG         +     +       L   ++      ++SLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242

Query: 213 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 392
           LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG
Sbjct: 243 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 302

Query: 393 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAXLXTXQQMWISKQE 572
           GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA L T QQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362

Query: 573 YDESGPFIVHRKC 611
           YDESGP IVHRKC
Sbjct: 363 YDESGPSIVHRKC 375


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  314 bits (770), Expect = 2e-87
 Identities = 153/193 (79%), Positives = 159/193 (82%)
 Frame = +3

Query: 33  GRDLTDYLMKILTERGSRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAASLEKSYE 212
           GRDLTDYLMKILTERG         +     +       L   ++      ++SLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242

Query: 213 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 392
           LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG
Sbjct: 243 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 302

Query: 393 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAXLXTXQQMWISKQE 572
           GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA L T QQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362

Query: 573 YDESGPFIVHRKC 611
           YDESGP IVHRKC
Sbjct: 363 YDESGPSIVHRKC 375


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  314 bits (770), Expect = 2e-87
 Identities = 153/193 (79%), Positives = 159/193 (82%)
 Frame = +3

Query: 33  GRDLTDYLMKILTERGSRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAASLEKSYE 212
           GRDLTDYLMKILTERG         +     +       L   ++      ++SLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242

Query: 213 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 392
           LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG
Sbjct: 243 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 302

Query: 393 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAXLXTXQQMWISKQE 572
           GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA L T QQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362

Query: 573 YDESGPFIVHRKC 611
           YDESGP IVHRKC
Sbjct: 363 YDESGPSIVHRKC 375


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  288 bits (707), Expect = 1e-79
 Identities = 141/193 (73%), Positives = 152/193 (78%)
 Frame = +3

Query: 33  GRDLTDYLMKILTERGSRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAASLEKSYE 212
           GRDLTDYLMKILTERG         +     +       L   ++      ++S EKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQAAAASSSSEKSYE 242

Query: 213 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 392
           LPDGQVITIGNERFR PEALFQPSFLGME+ GIHET YNSIM+CDVDIRKDLYAN+VLSG
Sbjct: 243 LPDGQVITIGNERFRAPEALFQPSFLGMESTGIHETVYNSIMRCDVDIRKDLYANSVLSG 302

Query: 393 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAXLXTXQQMWISKQE 572
           GTTMYPGIADRMQKEIT+LAPST+KIKIIAPPERKYSVWIGGSILA L T Q MWISK E
Sbjct: 303 GTTMYPGIADRMQKEITSLAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQTMWISKHE 362

Query: 573 YDESGPFIVHRKC 611
           YDE GP IVHRKC
Sbjct: 363 YDEGGPGIVHRKC 375


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 15/48 (31%), Positives = 19/48 (39%)
 Frame = -2

Query: 563  RDPHLLXGXXXGEDRSPDPYGVLPLWRSNDLNLHCRWGESCDFLLHTV 420
            R  H L G      R P P+G    W SN+ N       +    +HTV
Sbjct: 1638 RRNHTLFGNVWSSIRRPGPFGSKQKWNSNN-NKMSATSMAASAAMHTV 1684


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +2

Query: 62  DPXRARFSFTTTAEREIVRDIKEKLC-YVALDFEQEMATAASSSFPRE 202
           D  R+ F F     R +V DI+ + C   +L  E ++A A    +P +
Sbjct: 634 DRYRSEFGFVLEGRRILVDDIRVRGCGRASLFTEPDIAEATGPIYPEK 681


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +2

Query: 62  DPXRARFSFTTTAEREIVRDIKEKLC-YVALDFEQEMATAASSSFPRE 202
           D  R+ F F     R +V DI+ + C   +L  E + A A    +P +
Sbjct: 590 DRYRSEFGFVLEGRRILVDDIRVRGCGRASLFTEPDFAEATGPIYPEK 637


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,952
Number of Sequences: 2352
Number of extensions: 13944
Number of successful extensions: 52
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)