Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2123
(699 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 306 8e-84
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 306 8e-84
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 306 8e-84
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 306 8e-84
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 306 8e-84
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 306 8e-84
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 305 1e-83
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 305 1e-83
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 305 1e-83
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 299 9e-82
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 289 1e-78
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 146 1e-35
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 137 8e-33
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 113 2e-25
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 92 3e-19
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 83 2e-16
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 73 3e-13
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 73 3e-13
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 45 6e-05
Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical pr... 33 0.20
AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr prote... 33 0.20
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.60
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.60
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.60
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 4.2
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 4.2
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 4.2
AL032643-5|CAA21656.1| 622|Caenorhabditis elegans Hypothetical ... 28 7.4
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 306 bits (752), Expect = 8e-84
Identities = 148/193 (76%), Positives = 158/193 (81%)
Frame = +3
Query: 33 GRDLTDYLMKILTERGSRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAASLEKSYE 212
GRDLTDYLMKILTERG + + L ++ ++SLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 213 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 392
LPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 243 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 393 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAXLXTXQQMWISKQE 572
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA L T QQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 573 YDESGPFIVHRKC 611
YDESGP IVHRKC
Sbjct: 363 YDESGPSIVHRKC 375
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 306 bits (752), Expect = 8e-84
Identities = 148/193 (76%), Positives = 158/193 (81%)
Frame = +3
Query: 33 GRDLTDYLMKILTERGSRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAASLEKSYE 212
GRDLTDYLMKILTERG + + L ++ ++SLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 213 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 392
LPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 243 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 393 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAXLXTXQQMWISKQE 572
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA L T QQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 573 YDESGPFIVHRKC 611
YDESGP IVHRKC
Sbjct: 363 YDESGPSIVHRKC 375
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 306 bits (752), Expect = 8e-84
Identities = 148/193 (76%), Positives = 158/193 (81%)
Frame = +3
Query: 33 GRDLTDYLMKILTERGSRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAASLEKSYE 212
GRDLTDYLMKILTERG + + L ++ ++SLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 213 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 392
LPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 243 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 393 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAXLXTXQQMWISKQE 572
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA L T QQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 573 YDESGPFIVHRKC 611
YDESGP IVHRKC
Sbjct: 363 YDESGPSIVHRKC 375
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 306 bits (752), Expect = 8e-84
Identities = 148/193 (76%), Positives = 158/193 (81%)
Frame = +3
Query: 33 GRDLTDYLMKILTERGSRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAASLEKSYE 212
GRDLTDYLMKILTERG + + L ++ ++SLEKSYE
Sbjct: 139 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 198
Query: 213 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 392
LPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 199 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 258
Query: 393 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAXLXTXQQMWISKQE 572
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA L T QQMWISKQE
Sbjct: 259 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 318
Query: 573 YDESGPFIVHRKC 611
YDESGP IVHRKC
Sbjct: 319 YDESGPSIVHRKC 331
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 306 bits (752), Expect = 8e-84
Identities = 148/193 (76%), Positives = 158/193 (81%)
Frame = +3
Query: 33 GRDLTDYLMKILTERGSRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAASLEKSYE 212
GRDLTDYLMKILTERG + + L ++ ++SLEKSYE
Sbjct: 169 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 228
Query: 213 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 392
LPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 229 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 288
Query: 393 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAXLXTXQQMWISKQE 572
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA L T QQMWISKQE
Sbjct: 289 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 348
Query: 573 YDESGPFIVHRKC 611
YDESGP IVHRKC
Sbjct: 349 YDESGPSIVHRKC 361
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 306 bits (752), Expect = 8e-84
Identities = 148/193 (76%), Positives = 158/193 (81%)
Frame = +3
Query: 33 GRDLTDYLMKILTERGSRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAASLEKSYE 212
GRDLTDYLMKILTERG + + L ++ ++SLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 213 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 392
LPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 243 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 393 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAXLXTXQQMWISKQE 572
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA L T QQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 573 YDESGPFIVHRKC 611
YDESGP IVHRKC
Sbjct: 363 YDESGPSIVHRKC 375
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 305 bits (750), Expect = 1e-83
Identities = 147/193 (76%), Positives = 158/193 (81%)
Frame = +3
Query: 33 GRDLTDYLMKILTERGSRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAASLEKSYE 212
GRDLTDYLMKILTERG + + L ++ ++SLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 213 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 392
LPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 243 LPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 393 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAXLXTXQQMWISKQE 572
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA L T QQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 573 YDESGPFIVHRKC 611
YDESGP IVHRKC
Sbjct: 363 YDESGPSIVHRKC 375
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 305 bits (750), Expect = 1e-83
Identities = 147/193 (76%), Positives = 158/193 (81%)
Frame = +3
Query: 33 GRDLTDYLMKILTERGSRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAASLEKSYE 212
GRDLTDYLMKILTERG + + L ++ ++SLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 213 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 392
LPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 243 LPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 393 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAXLXTXQQMWISKQE 572
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA L T QQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 573 YDESGPFIVHRKC 611
YDESGP IVHRKC
Sbjct: 363 YDESGPSIVHRKC 375
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 305 bits (750), Expect = 1e-83
Identities = 147/193 (76%), Positives = 158/193 (81%)
Frame = +3
Query: 33 GRDLTDYLMKILTERGSRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAASLEKSYE 212
GRDLTDYLMKILTERG + + L ++ ++SLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 213 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 392
LPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 243 LPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 393 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAXLXTXQQMWISKQE 572
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA L T QQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 573 YDESGPFIVHRKC 611
YDESGP IVHRKC
Sbjct: 363 YDESGPSIVHRKC 375
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 299 bits (735), Expect = 9e-82
Identities = 146/193 (75%), Positives = 157/193 (81%)
Frame = +3
Query: 33 GRDLTDYLMKILTERGSRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAASLEKSYE 212
GRDLTDYLMKILTERG + + L ++ ++SLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 213 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 392
LPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSG
Sbjct: 243 LPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 393 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAXLXTXQQMWISKQE 572
GTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILA L T QQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361
Query: 573 YDESGPFIVHRKC 611
YDESGP IVHRKC
Sbjct: 362 YDESGPSIVHRKC 374
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 289 bits (710), Expect = 1e-78
Identities = 141/193 (73%), Positives = 151/193 (78%)
Frame = +3
Query: 33 GRDLTDYLMKILTERGSRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAASLEKSYE 212
GRDLTDY+MKILTERG + + + ++SLEKSYE
Sbjct: 182 GRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFESELAAAASSSSLEKSYE 241
Query: 213 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 392
LPDGQVITIGNERFRCPE LFQP+F+GME GIHETTY SIMKCDVDIRKDLYANTVLSG
Sbjct: 242 LPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSG 301
Query: 393 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAXLXTXQQMWISKQE 572
GT+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILA L T QQMWISKQE
Sbjct: 302 GTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361
Query: 573 YDESGPFIVHRKC 611
YDESGP IVHRKC
Sbjct: 362 YDESGPSIVHRKC 374
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 146 bits (354), Expect = 1e-35
Identities = 78/192 (40%), Positives = 109/192 (56%)
Frame = +3
Query: 33 GRDLTDYLMKILTERGSRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAASLEKSYE 212
GRD+T+YL ++L R + V + A L P S++ SY
Sbjct: 186 GRDVTEYL-RVLLRREGYEFHRSNEFEIVREMKENACYLALD----PTKVENNSVKSSYA 240
Query: 213 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 392
LPD I I N FR PE LF+P +G E G+ SIMKCDVD+R+ LY+N VLSG
Sbjct: 241 LPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSG 300
Query: 393 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAXLXTXQQMWISKQE 572
GTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+A L T ++MW+ K+E
Sbjct: 301 GTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKE 360
Query: 573 YDESGPFIVHRK 608
Y++ G +H++
Sbjct: 361 YEDMGASAMHKR 372
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 137 bits (331), Expect = 8e-33
Identities = 75/198 (37%), Positives = 106/198 (53%), Gaps = 13/198 (6%)
Frame = +3
Query: 33 GRDLTDYLMKILTERGSRSLPPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAASLEKSYE 212
GRD+T YL+K+L +RG ++ + ++ L + Y
Sbjct: 186 GRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYT 245
Query: 213 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 392
LPDG+VI +G ERF PE LFQP + +E G+ E + I D+D R D Y + VLSG
Sbjct: 246 LPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSG 305
Query: 393 GTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILAXL- 536
GTTMYPG+ R++KE+ L A KI+I APP RK+ V++GG++LA L
Sbjct: 306 GTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLM 365
Query: 537 -XTXQQMWISKQEYDESG 587
Q W+SK+EY+E G
Sbjct: 366 KDRDQDFWVSKKEYEEGG 383
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 80 FSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 190
++F +A+ E VR +KEKLCY+A D EQE A ++
Sbjct: 202 YNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETT 238
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 113 bits (271), Expect = 2e-25
Identities = 57/143 (39%), Positives = 78/143 (54%), Gaps = 8/143 (5%)
Frame = +3
Query: 207 YELPDGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKDLY 371
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 372 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILAXLXT 542
+N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL L T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 543 XQQMWISKQEYDESGPFIVHRKC 611
QQMW+SK EYDESG IV +KC
Sbjct: 413 FQQMWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 92.3 bits (219), Expect = 3e-19
Identities = 38/112 (33%), Positives = 70/112 (62%)
Frame = +3
Query: 237 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 416
I N RF C E LF+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ PGI
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGI 487
Query: 417 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAXLXTXQQMWISKQE 572
A+++++E++ + P+T+ ++ P R + ++G I+A T + IS Q+
Sbjct: 488 AEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 82.6 bits (195), Expect = 2e-16
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 17/139 (12%)
Frame = +3
Query: 231 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 407
+ +G ERF PE F P F E I +T I +C +D+R+ LY N VLSGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 408 PGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGSILAXLX 539
A ++Q+++ L+ P + +++I+ ++Y+VW GGS+LA
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTS 395
Query: 540 TXQQMWISKQEYDESGPFI 596
Q+ +K EY E GP I
Sbjct: 396 EFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 72.5 bits (170), Expect = 3e-13
Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 3/122 (2%)
Frame = +3
Query: 231 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 410
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 411 GIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILAXLXTXQQMWISKQEYDE 581
G +R+++E+ ++ P+ + + + P+ W G L L + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 582 SG 587
G
Sbjct: 379 RG 380
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 72.5 bits (170), Expect = 3e-13
Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 3/122 (2%)
Frame = +3
Query: 231 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 410
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 411 GIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILAXLXTXQQMWISKQEYDE 581
G +R+++E+ ++ P+ + + + P+ W G L L + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 582 SG 587
G
Sbjct: 379 RG 380
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 44.8 bits (101), Expect = 6e-05
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 10/91 (10%)
Frame = +3
Query: 333 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 497
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 498 ----YSVWIGGSILAXL-XTXQQMWISKQEY 575
+ W+G S+L L T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical protein
C41C4.4 protein.
Length = 967
Score = 33.1 bits (72), Expect = 0.20
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 125 KEKLCYVALDFEQEMATAASSSFPREVLRTSRRSGHHYRK--RKIPLPRGSLPTLVLGYG 298
+EK+C + ++ T S S R++LR R HHYR+ + G +P L Y
Sbjct: 821 REKICDALKEDLRKFRTYKSFSV-RDLLRAMRNKKHHYRELPEDVRQSLGDIPDQFLHYF 879
Query: 299 SLRHPR 316
+ R PR
Sbjct: 880 TSRFPR 885
>AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr protein
kinase protein.
Length = 967
Score = 33.1 bits (72), Expect = 0.20
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 125 KEKLCYVALDFEQEMATAASSSFPREVLRTSRRSGHHYRK--RKIPLPRGSLPTLVLGYG 298
+EK+C + ++ T S S R++LR R HHYR+ + G +P L Y
Sbjct: 821 REKICDALKEDLRKFRTYKSFSV-RDLLRAMRNKKHHYRELPEDVRQSLGDIPDQFLHYF 879
Query: 299 SLRHPR 316
+ R PR
Sbjct: 880 TSRFPR 885
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.60
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 509 PYGVLPLWRSNDLNLHCRWGESCD 438
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.60
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 509 PYGVLPLWRSNDLNLHCRWGESCD 438
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.60
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 509 PYGVLPLWRSNDLNLHCRWGESCD 438
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 239 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 352
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 239 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 352
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 239 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 352
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 994 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1031
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 239 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 352
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 239 RKRKIPLPRGSLPTLVLGYGSLRHPRDHI*LHHEVRRG 352
RKR+ LPRG++ T G RHP I L +E G
Sbjct: 1578 RKRQQCLPRGNIYTCQCGRNEKRHPITDICLKNECLTG 1615
>AL032643-5|CAA21656.1| 622|Caenorhabditis elegans Hypothetical
protein Y54E5A.7 protein.
Length = 622
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +2
Query: 65 PXRARFSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSFPREVLRTSRRSGHHYRK 244
P R + E ++D K + Y+ D E+EM S P ++ +SG YRK
Sbjct: 391 PPPVRLTNAKATEELYLKDAKIERFYIDQDTEEEMLHIDGVSMPTKMFVELEKSG-QYRK 449
Query: 245 RKIPLPRG 268
L G
Sbjct: 450 LNYILKMG 457
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,492,044
Number of Sequences: 27780
Number of extensions: 334201
Number of successful extensions: 1007
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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