Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2118
         (695 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036925-1|AAH36925.1|  349|Homo sapiens chromosome 11 open read...    87   6e-17
AK057237-1|BAB71391.1|  349|Homo sapiens protein ( Homo sapiens ...    87   6e-17
AF242519-1|AAF99600.1|  461|Homo sapiens zinc finger protein SBZ...    32   2.2  

>BC036925-1|AAH36925.1|  349|Homo sapiens chromosome 11 open reading
           frame 77 protein.
          Length = 349

 Score = 87.0 bits (206), Expect = 6e-17
 Identities = 48/118 (40%), Positives = 71/118 (60%), Gaps = 3/118 (2%)
 Frame = +2

Query: 311 NTGGATHD-AFI*ENSVVNNYMQSLHRNNEQVWLLGDSGYPQRPWLMTPILDAVEGTPA- 484
           N  G+  D A + ++S+ + +   +H+++   WLLGDS +  R WLMTP+   +  TPA 
Sbjct: 192 NWPGSLQDCAVLQQSSLSSQFEAGMHKDS---WLLGDSSFFLRTWLMTPL--HIPETPAE 246

Query: 485 YKYTAVHGKTRVAIENTFGRLKNRWRCLCKDR-TLHYAPVKCAKIITACCVLHNLAIE 655
           Y+Y   H  T   IE TF  L +R+RCL   +  L Y+P K + II ACCVLHN+++E
Sbjct: 247 YRYNMAHSATHSVIEKTFRTLCSRFRCLDGSKGALQYSPEKSSHIILACCVLHNISLE 304



 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 22/60 (36%), Positives = 31/60 (51%)
 Frame = +1

Query: 136 FFAKYGFPGVIGCIDGCHFHIFTPKKEVEHLYYSRKHFHSLNVQMICDSDCRILNVNAKY 315
           F+   G PGV+G +D  H  I  P  E +  Y +RK  HSLN  M+CD    ++ V   +
Sbjct: 135 FYGLAGMPGVMGVVDCIHVAIKAPNAE-DLSYVNRKGLHSLNCLMVCDIRGTLMTVETNW 193


>AK057237-1|BAB71391.1|  349|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32675 fis, clone TESTI1000163. ).
          Length = 349

 Score = 87.0 bits (206), Expect = 6e-17
 Identities = 48/118 (40%), Positives = 71/118 (60%), Gaps = 3/118 (2%)
 Frame = +2

Query: 311 NTGGATHD-AFI*ENSVVNNYMQSLHRNNEQVWLLGDSGYPQRPWLMTPILDAVEGTPA- 484
           N  G+  D A + ++S+ + +   +H+++   WLLGDS +  R WLMTP+   +  TPA 
Sbjct: 192 NWPGSLQDCAVLQQSSLSSQFEAGMHKDS---WLLGDSSFFLRTWLMTPL--HIPETPAE 246

Query: 485 YKYTAVHGKTRVAIENTFGRLKNRWRCLCKDR-TLHYAPVKCAKIITACCVLHNLAIE 655
           Y+Y   H  T   IE TF  L +R+RCL   +  L Y+P K + II ACCVLHN+++E
Sbjct: 247 YRYNMAHSATHSVIEKTFRTLCSRFRCLDGSKGALQYSPEKSSHIILACCVLHNISLE 304



 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 22/60 (36%), Positives = 31/60 (51%)
 Frame = +1

Query: 136 FFAKYGFPGVIGCIDGCHFHIFTPKKEVEHLYYSRKHFHSLNVQMICDSDCRILNVNAKY 315
           F+   G PGV+G +D  H  I  P  E +  Y +RK  HSLN  M+CD    ++ V   +
Sbjct: 135 FYGLAGMPGVMGVVDCIHVAIKAPNAE-DLSYVNRKGLHSLNCLMVCDIRGTLMTVETNW 193


>AF242519-1|AAF99600.1|  461|Homo sapiens zinc finger protein SBZF3
           protein.
          Length = 461

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +2

Query: 5   DCKQICEGSTRCSCNSCN--FKYFHKISLCQS**RCNKKTRKCE 130
           DCK+I  G   C C  CN  FK    +++ +      KKT +CE
Sbjct: 229 DCKRIHVGEKHCKCEECNNIFKSCSSLAVVEK-NHTEKKTYRCE 271


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,272,488
Number of Sequences: 237096
Number of extensions: 2380281
Number of successful extensions: 3939
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3935
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)