Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2118
         (695 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058280-1|AAL13509.1|  429|Drosophila melanogaster GH03217p pro...    40   0.003
AE014296-2046|AAN12246.1|  429|Drosophila melanogaster CG32095-P...    40   0.003
BT001629-1|AAN71384.1|  805|Drosophila melanogaster RE37929p pro...    29   8.0  
AE014297-4755|AAN14274.1|  833|Drosophila melanogaster CG1499-PB...    29   8.0  
AE014297-4754|AAF57159.1|  833|Drosophila melanogaster CG1499-PA...    29   8.0  

>AY058280-1|AAL13509.1|  429|Drosophila melanogaster GH03217p
           protein.
          Length = 429

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 25/81 (30%), Positives = 35/81 (43%)
 Frame = +2

Query: 425 YPQRPWLMTPILDAVEGTPAYKYTAVHGKTRVAIENTFGRLKNRWRCLCKDRTLHYAPVK 604
           YP RPWL+    D       + +  V    +   +    RL +RW  L +   + +    
Sbjct: 304 YPLRPWLLQRYTDPT-APHEHDFNEVAEHLQELSDCALHRLMSRWSFLSQPLDISFHTAS 362

Query: 605 CAKIITACCVLHNLAIEFTVP 667
           C  IITA  VLHNL  E + P
Sbjct: 363 C--IITAAAVLHNLLEELSEP 381


>AE014296-2046|AAN12246.1|  429|Drosophila melanogaster CG32095-PA
           protein.
          Length = 429

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 25/81 (30%), Positives = 35/81 (43%)
 Frame = +2

Query: 425 YPQRPWLMTPILDAVEGTPAYKYTAVHGKTRVAIENTFGRLKNRWRCLCKDRTLHYAPVK 604
           YP RPWL+    D       + +  V    +   +    RL +RW  L +   + +    
Sbjct: 304 YPLRPWLLQRYTDPT-APHEHDFNEVAEHLQELSDCALHRLMSRWSFLSQPLDISFHTAS 362

Query: 605 CAKIITACCVLHNLAIEFTVP 667
           C  IITA  VLHNL  E + P
Sbjct: 363 C--IITAAAVLHNLLEELSEP 381


>BT001629-1|AAN71384.1|  805|Drosophila melanogaster RE37929p
           protein.
          Length = 805

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 5   DCKQICEGSTRCSCNSCNFKYFHKISLCQ 91
           DC ++C G T  +C S N  Y+    LC+
Sbjct: 233 DCLELCLGETEFTCRSAN--YYRHSGLCE 259


>AE014297-4755|AAN14274.1|  833|Drosophila melanogaster CG1499-PB,
           isoform B protein.
          Length = 833

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 5   DCKQICEGSTRCSCNSCNFKYFHKISLCQ 91
           DC ++C G T  +C S N  Y+    LC+
Sbjct: 233 DCLELCLGETEFTCRSAN--YYRHSGLCE 259


>AE014297-4754|AAF57159.1|  833|Drosophila melanogaster CG1499-PA,
           isoform A protein.
          Length = 833

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 5   DCKQICEGSTRCSCNSCNFKYFHKISLCQ 91
           DC ++C G T  +C S N  Y+    LC+
Sbjct: 233 DCLELCLGETEFTCRSAN--YYRHSGLCE 259


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,989,049
Number of Sequences: 53049
Number of extensions: 733915
Number of successful extensions: 1494
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1492
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)