Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2111
(600 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC017559-1|AAH17559.1| 186|Homo sapiens TBP-like 1 protein. 42 0.001
BC000381-1|AAH00381.1| 186|Homo sapiens TBP-like 1 protein. 42 0.001
AL035699-5|CAD92518.1| 45|Homo sapiens TBP-like 1 protein. 42 0.001
AL035699-4|CAD92517.1| 91|Homo sapiens TBP-like 1 protein. 42 0.001
AL035699-3|CAD92516.1| 128|Homo sapiens TBP-like 1 protein. 42 0.001
AL035699-2|CAD92515.1| 163|Homo sapiens TBP-like 1 protein. 42 0.001
AL035699-1|CAB43704.1| 186|Homo sapiens TBP-like 1 protein. 42 0.001
AF136570-1|AAD28785.1| 186|Homo sapiens TATA box binding protei... 42 0.001
AF130312-1|AAD24800.1| 186|Homo sapiens STUD protein protein. 42 0.001
AB020881-1|BAA75218.1| 186|Homo sapiens TBP-like protein protein. 42 0.001
U55208-1|AAC50927.1| 2175|Homo sapiens myosin VIIa protein. 29 9.4
>BC017559-1|AAH17559.1| 186|Homo sapiens TBP-like 1 protein.
Length = 186
Score = 42.3 bits (95), Expect = 0.001
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 482 IDIMINXVXCSFSVKCHLNLRQIALNGVN 568
+DI+I V C F +CHLNLR+IAL G N
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGAN 37
>BC000381-1|AAH00381.1| 186|Homo sapiens TBP-like 1 protein.
Length = 186
Score = 42.3 bits (95), Expect = 0.001
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 482 IDIMINXVXCSFSVKCHLNLRQIALNGVN 568
+DI+I V C F +CHLNLR+IAL G N
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGAN 37
>AL035699-5|CAD92518.1| 45|Homo sapiens TBP-like 1 protein.
Length = 45
Score = 42.3 bits (95), Expect = 0.001
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 482 IDIMINXVXCSFSVKCHLNLRQIALNGVN 568
+DI+I V C F +CHLNLR+IAL G N
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGAN 37
>AL035699-4|CAD92517.1| 91|Homo sapiens TBP-like 1 protein.
Length = 91
Score = 42.3 bits (95), Expect = 0.001
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 482 IDIMINXVXCSFSVKCHLNLRQIALNGVN 568
+DI+I V C F +CHLNLR+IAL G N
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGAN 37
>AL035699-3|CAD92516.1| 128|Homo sapiens TBP-like 1 protein.
Length = 128
Score = 42.3 bits (95), Expect = 0.001
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 482 IDIMINXVXCSFSVKCHLNLRQIALNGVN 568
+DI+I V C F +CHLNLR+IAL G N
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGAN 37
>AL035699-2|CAD92515.1| 163|Homo sapiens TBP-like 1 protein.
Length = 163
Score = 42.3 bits (95), Expect = 0.001
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 482 IDIMINXVXCSFSVKCHLNLRQIALNGVN 568
+DI+I V C F +CHLNLR+IAL G N
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGAN 37
>AL035699-1|CAB43704.1| 186|Homo sapiens TBP-like 1 protein.
Length = 186
Score = 42.3 bits (95), Expect = 0.001
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 482 IDIMINXVXCSFSVKCHLNLRQIALNGVN 568
+DI+I V C F +CHLNLR+IAL G N
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGAN 37
>AF136570-1|AAD28785.1| 186|Homo sapiens TATA box binding
protein-related factor 2 protein.
Length = 186
Score = 42.3 bits (95), Expect = 0.001
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 482 IDIMINXVXCSFSVKCHLNLRQIALNGVN 568
+DI+I V C F +CHLNLR+IAL G N
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGAN 37
>AF130312-1|AAD24800.1| 186|Homo sapiens STUD protein protein.
Length = 186
Score = 42.3 bits (95), Expect = 0.001
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 482 IDIMINXVXCSFSVKCHLNLRQIALNGVN 568
+DI+I V C F +CHLNLR+IAL G N
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGAN 37
>AB020881-1|BAA75218.1| 186|Homo sapiens TBP-like protein protein.
Length = 186
Score = 42.3 bits (95), Expect = 0.001
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 482 IDIMINXVXCSFSVKCHLNLRQIALNGVN 568
+DI+I V C F +CHLNLR+IAL G N
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIALEGAN 37
>U55208-1|AAC50927.1| 2175|Homo sapiens myosin VIIa protein.
Length = 2175
Score = 29.5 bits (63), Expect = 9.4
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +2
Query: 284 NGIKELSKGTHGVXANHGISTHXVPTHMVPDHEYCETTAQTPSQRQAITELAPTQPAVDE 463
NGI E +K + S + +PT +P E TP QRQ + L + A E
Sbjct: 1612 NGINERTKQRGDFPTD---SVYVMPTVTMPPREIVALVTMTPDQRQDVVRLLQLRTAEPE 1668
Query: 464 EEETP 478
P
Sbjct: 1669 VRAKP 1673
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,169,569
Number of Sequences: 237096
Number of extensions: 1370505
Number of successful extensions: 6265
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6265
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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