Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2110
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 40 0.001
U13071-2|AAL65793.1| 988|Caenorhabditis elegans Hypothetical pr... 38 0.010
U64601-8|AAB04576.2| 413|Caenorhabditis elegans Hypothetical pr... 33 0.16
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 32 0.38
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 30 2.0
Z35604-2|CAA84677.1| 809|Caenorhabditis elegans Hypothetical pr... 30 2.0
U19744-1|AAA85704.1| 809|Caenorhabditis elegans integrin beta p... 30 2.0
L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle position... 30 2.0
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 30 2.0
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 30 2.0
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 30 2.0
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 30 2.0
AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane... 30 2.0
Z78061-1|CAB01494.1| 658|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 29 2.7
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 29 2.7
U64605-3|AAF98605.3| 423|Caenorhabditis elegans Hypothetical pr... 29 4.7
U49956-2|AAO38616.1| 136|Caenorhabditis elegans Dauer or aging ... 29 4.7
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 29 4.7
U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 29 4.7
AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical ... 29 4.7
AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical ... 29 4.7
AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical ... 29 4.7
Z81504-1|CAB04116.1| 426|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z69661-2|CAA93494.1| 925|Caenorhabditis elegans Hypothetical pr... 28 6.2
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 6.2
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu... 28 6.2
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein. 28 6.2
AL110485-23|CAB60377.3| 770|Caenorhabditis elegans Hypothetical... 28 6.2
Z81093-3|CAB03147.1| 610|Caenorhabditis elegans Hypothetical pr... 28 8.1
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 28 8.1
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 28 8.1
U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr... 28 8.1
AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cycl... 28 8.1
AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor typ... 28 8.1
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
protein W05B2.2 protein.
Length = 1278
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = +3
Query: 24 DAVCDESXKVCTCHPDVPISNHFDKCGKPASINESCLFNEQCEDVDFKTECKNERCACKF 203
+A+C + + + H VP+ K +P ++ C F+EQCE V T C+N +C C
Sbjct: 58 EAICLGTCRCKSTH--VPVEEQCWKKIEPGNVG--CTFDEQCEGVWPMTRCQNGQCECSE 113
Query: 204 EMVPLVTVDGAV 239
E + T +G V
Sbjct: 114 EETLIETPEGNV 125
>U13071-2|AAL65793.1| 988|Caenorhabditis elegans Hypothetical
protein T22F7.3 protein.
Length = 988
Score = 37.5 bits (83), Expect = 0.010
Identities = 29/73 (39%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +3
Query: 51 VCTCHPD-VPISNHFDKCGKPASINES-CLFNEQCEDVDFKTECKNER-CACKFEMVPLV 221
VC+C D V IS H C + ES C+ N QCE V T C + C C E VP
Sbjct: 55 VCSCLSDFVSISQH---CWPKVNPGESGCVENRQCEAVWPGTICTSAGLCECPKETVPSR 111
Query: 222 TVDGAVICTPVKP 260
T DG V + P
Sbjct: 112 TRDGTVCISSAIP 124
>U64601-8|AAB04576.2| 413|Caenorhabditis elegans Hypothetical
protein M03F4.6 protein.
Length = 413
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = +3
Query: 117 INESCLFNEQCEDVDFKTECKNERCACKFEMVPLVTVDGAVIC--TPVKPVDESTRTVDP 290
I CLF+E+C ++ + C+N RC C + IC P K D R P
Sbjct: 31 IGSDCLFDEECYGMN--SVCRNSRCTCPTNFEEYDIDERTTICRLAPAKIGDSCQRDCKP 88
Query: 291 AMI 299
++
Sbjct: 89 PLL 91
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 32.3 bits (70), Expect = 0.38
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 99 CGKPASINES-CLFNEQCEDVDFKTECKNERCACKFE-MVPLVTVDGAV 239
C + S ++S C ++ QC V + CKN +C C E M+ + T DG +
Sbjct: 148 CYEKISPSDSGCFYDTQCASVWPDSYCKNGQCMCPSEDMIAVKTKDGTL 196
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +3
Query: 99 CGKPASINES-CLFNEQCEDVDFKTECKNERCACKFEMVPLVTVDGAV 239
C + + ES C N QCE V C++ C C P T DG V
Sbjct: 57 CWRKINPGESGCTQNRQCEAVWPGAYCRSGECRCANNQPPFRTRDGLV 104
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/66 (34%), Positives = 31/66 (46%)
Frame = -3
Query: 346 TTQMMTNISAMPTRTPIIAGSTVLVDSSTGFTGVHITAPSTVTSGTISNLQAQRSFLHSV 167
+T ++ S+ TP ST SST T TAPST T+G S+ S S
Sbjct: 460 STVTSSSSSSTTVTTPTSTESTSTSPSSTVTTST--TAPSTSTTGPSSSSSTPSSTASSS 517
Query: 166 LKSTSS 149
+ ST+S
Sbjct: 518 VSSTAS 523
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/66 (34%), Positives = 31/66 (46%)
Frame = -3
Query: 346 TTQMMTNISAMPTRTPIIAGSTVLVDSSTGFTGVHITAPSTVTSGTISNLQAQRSFLHSV 167
+T ++ S+ TP ST SST T TAPST T+G S+ S S
Sbjct: 460 STVTSSSSSSTTVTTPTSTESTSTSPSSTVTTST--TAPSTSTTGPSSSSSTPSSTASSS 517
Query: 166 LKSTSS 149
+ ST+S
Sbjct: 518 VSSTAS 523
>Z35604-2|CAA84677.1| 809|Caenorhabditis elegans Hypothetical
protein ZK1058.2 protein.
Length = 809
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Frame = +3
Query: 3 TADCNFPDAVCDESXKVCTCHPDVPISNHFDKCGKP----ASINESCLFNEQCEDVDFKT 170
+ADCN D VC VC C + +C +P A++NE C + + +
Sbjct: 486 SADCNGGDMVCG----VCRCKGGNV--GKYCECNRPGMSTAALNEKCKRTNESAICEGRG 539
Query: 171 ECKNERCACKFEMVPLVTVDG 233
C RC C P + G
Sbjct: 540 VCNCGRCECNPRANPEEQISG 560
>U19744-1|AAA85704.1| 809|Caenorhabditis elegans integrin beta
pat-3 protein.
Length = 809
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Frame = +3
Query: 3 TADCNFPDAVCDESXKVCTCHPDVPISNHFDKCGKP----ASINESCLFNEQCEDVDFKT 170
+ADCN D VC VC C + +C +P A++NE C + + +
Sbjct: 486 SADCNGGDMVCG----VCRCKGGNV--GKYCECNRPGMSTAALNEKCKRTNESAICEGRG 539
Query: 171 ECKNERCACKFEMVPLVTVDG 233
C RC C P + G
Sbjct: 540 VCNCGRCECNPRANPEEQISG 560
>L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle positioning
protein 4 protein.
Length = 2104
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 14/72 (19%)
Frame = +3
Query: 6 ADCNFPDAVCDESXK--VCTC-------HPDVPISN-----HFDKCGKPASINESCLFNE 143
+DC+ PDA+C E K CTC +P P N ++C KP +NE C +
Sbjct: 1629 SDCH-PDAICKEVGKGYTCTCPDGFRDLNPSRPGRNCLSYRGVNECEKP-ELNE-CSPHA 1685
Query: 144 QCEDVDFKTECK 179
+C D+D+ +C+
Sbjct: 1686 RCIDLDYLYKCE 1697
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/62 (27%), Positives = 23/62 (37%)
Frame = +3
Query: 12 CNFPDAVCDESXKVCTCHPDVPISNHFDKCGKPASINESCLFNEQCEDVDFKTECKNERC 191
C + CD+ CTC P S+ C K ESC + C D + +C
Sbjct: 561 CKCVNGKCDKETGECTCQPGFFGSDCSTTCSK-GKYGESCELSCPCSDASCSKQ--TGKC 617
Query: 192 AC 197
C
Sbjct: 618 LC 619
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/62 (27%), Positives = 23/62 (37%)
Frame = +3
Query: 12 CNFPDAVCDESXKVCTCHPDVPISNHFDKCGKPASINESCLFNEQCEDVDFKTECKNERC 191
C + CD+ CTC P S+ C K ESC + C D + +C
Sbjct: 561 CKCVNGKCDKETGECTCQPGFFGSDCSTTCSK-GKYGESCELSCPCSDASCSKQ--TGKC 617
Query: 192 AC 197
C
Sbjct: 618 LC 619
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/62 (27%), Positives = 23/62 (37%)
Frame = +3
Query: 12 CNFPDAVCDESXKVCTCHPDVPISNHFDKCGKPASINESCLFNEQCEDVDFKTECKNERC 191
C + CD+ CTC P S+ C K ESC + C D + +C
Sbjct: 561 CKCVNGKCDKETGECTCQPGFFGSDCSTTCSK-GKYGESCELSCPCSDASCSKQ--TGKC 617
Query: 192 AC 197
C
Sbjct: 618 LC 619
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/62 (27%), Positives = 23/62 (37%)
Frame = +3
Query: 12 CNFPDAVCDESXKVCTCHPDVPISNHFDKCGKPASINESCLFNEQCEDVDFKTECKNERC 191
C + CD+ CTC P S+ C K ESC + C D + +C
Sbjct: 561 CKCVNGKCDKETGECTCQPGFFGSDCSTTCSK-GKYGESCELSCPCSDASCSKQ--TGKC 617
Query: 192 AC 197
C
Sbjct: 618 LC 619
>AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane
matrix receptor MUP-4 protein.
Length = 2104
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 14/72 (19%)
Frame = +3
Query: 6 ADCNFPDAVCDESXK--VCTC-------HPDVPISN-----HFDKCGKPASINESCLFNE 143
+DC+ PDA+C E K CTC +P P N ++C KP +NE C +
Sbjct: 1629 SDCH-PDAICKEVGKGYTCTCPDGFRDLNPSRPGRNCLSYRGVNECEKP-ELNE-CSPHA 1685
Query: 144 QCEDVDFKTECK 179
+C D+D+ +C+
Sbjct: 1686 RCIDLDYLYKCE 1697
>Z78061-1|CAB01494.1| 658|Caenorhabditis elegans Hypothetical
protein C48G7.1 protein.
Length = 658
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -3
Query: 241 ITAPSTVTSGTISNLQAQRSFLHSVLKSTSSHCSLNKQDSLMLAGFPHLS 92
+TA + T S L RSFL S+L SS+ +++SL + P L+
Sbjct: 232 VTASPKLGHSTSSTLSRPRSFLRSLLSFGSSNKEHKRKESLDIDSTPRLA 281
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = -3
Query: 319 AMPTRTPIIAGSTVLVDSSTGFTGVHITAPSTVTSGTISNLQAQRS 182
A+ T TP+I+ +T + S+T + + T S+ T+G++S+ ++ S
Sbjct: 386 AVSTTTPMISLTTESMQSTTSSSEISTTLDSSSTTGSVSSTESVTS 431
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = -3
Query: 319 AMPTRTPIIAGSTVLVDSSTGFTGVHITAPSTVTSGTISNLQAQRS 182
A+ T TP+I+ +T + S+T + + T S+ T+G++S+ ++ S
Sbjct: 386 AVSTTTPMISLTTESMQSTTSSSEISTTLDSSSTTGSVSSTESVTS 431
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = -3
Query: 319 AMPTRTPIIAGSTVLVDSSTGFTGVHITAPSTVTSGTISNLQAQRS 182
A+ T TP+I+ +T + S+T + + T S+ T+G++S+ ++ S
Sbjct: 386 AVSTTTPMISLTTESMQSTTSSSEISTTLDSSSTTGSVSSTESVTS 431
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = -3
Query: 319 AMPTRTPIIAGSTVLVDSSTGFTGVHITAPSTVTSGTISNLQAQRS 182
A+ T TP+I+ +T + S+T + + T S+ T+G++S+ ++ S
Sbjct: 386 AVSTTTPMISLTTESMQSTTSSSEISTTLDSSSTTGSVSSTESVTS 431
>U64605-3|AAF98605.3| 423|Caenorhabditis elegans Hypothetical
protein C05D9.3 protein.
Length = 423
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +3
Query: 30 VCDESXKVCTCHPDVPISNHFDKCGKPASINESCLFNEQCEDVDFKTECKNERCAC 197
VCD+S C + P+++H K + + + C FN +CK +C C
Sbjct: 242 VCDQSRGGDKC--ECPLASH--GVSKASELEDKCRFNSSSPVCSASGKCKCGQCQC 293
>U49956-2|AAO38616.1| 136|Caenorhabditis elegans Dauer or aging
adult overexpressionprotein 2 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = +3
Query: 9 DCNFPDAVCDESXKVCTCHPDVPISNHFDKCGKPASINE--SCLFNEQCEDVDFK 167
DC V E K CT H P SN+ D + NE C +N ++ FK
Sbjct: 81 DCCKKAGVSGECLKYCTAHKGAP-SNYLDYAFCTENFNEIRDCFYNHLDKNEPFK 134
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 96 KCGKPASINESCLFNEQCEDVDFKTECKNERCAC 197
+C K SI + C+ N QC +F + C++ C C
Sbjct: 297 RCVKQVSIGQPCVANAQC---NFGSFCQSGTCQC 327
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 18 FPDAVCDESXKVCTCHPDVPISNHFDKCGKPASINE 125
+PDA C + CTC P++P++ CG+ N+
Sbjct: 183 YPDATC--FMQTCTCPPNLPVAAD-GTCGRSCPNNQ 215
>U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical
protein F48E3.8b protein.
Length = 1299
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 96 KCGKPASINESCLFNEQCEDVDFKTECKNERCAC 197
+C K SI + C+ N QC +F + C++ C C
Sbjct: 297 RCVKQVSIGQPCVANAQC---NFGSFCQSGTCQC 327
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 18 FPDAVCDESXKVCTCHPDVPISNHFDKCGKPASINE 125
+PDA C + CTC P++P++ CG+ N+
Sbjct: 183 YPDATC--FMQTCTCPPNLPVAAD-GTCGRSCPNNQ 215
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = -3
Query: 292 AGSTVLVDSS--TGFTGVHITAPSTVTSGT 209
AGST + S+ TG TGV ++ P T+ +GT
Sbjct: 640 AGSTAMTPSTQGTGATGVTMSTPGTMATGT 669
>AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical
protein M01B12.4b protein.
Length = 644
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 454 TLRTGRGSRVSMRPPSRQASQQELRPHSPSPA 549
T R SR++M+ P+R AS RP++ +P+
Sbjct: 217 TSRPATSSRLTMKQPARGASTSAARPNTATPS 248
>AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical
protein M01B12.4c protein.
Length = 678
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 454 TLRTGRGSRVSMRPPSRQASQQELRPHSPSPA 549
T R SR++M+ P+R AS RP++ +P+
Sbjct: 207 TSRPATSSRLTMKQPARGASTSAARPNTATPS 238
>AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical
protein M01B12.4a protein.
Length = 634
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 454 TLRTGRGSRVSMRPPSRQASQQELRPHSPSPA 549
T R SR++M+ P+R AS RP++ +P+
Sbjct: 207 TSRPATSSRLTMKQPARGASTSAARPNTATPS 238
>Z81504-1|CAB04116.1| 426|Caenorhabditis elegans Hypothetical
protein F15H9.1 protein.
Length = 426
Score = 28.3 bits (60), Expect = 6.2
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Frame = -3
Query: 373 HLALLKSRRTTQMMTNISAMPTRTPIIAGSTVLVDSSTGFT------GVHITAPST---- 224
H A + +R + T I+++ T T I + ST+ ++ +TG T + T PST
Sbjct: 271 HFAGICEKR--KQKTTIASIKTTTSIPSTSTLQINHTTGSTVNSTTRMISSTIPSTPNLQ 328
Query: 223 VTSGTISNLQAQRSFLHSVLKSTSSH 146
+ S T S + S + S + STSS+
Sbjct: 329 INSTTSSIQNSTTSMISSTISSTSSN 354
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical protein
E01G6.1 protein.
Length = 1391
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +3
Query: 123 ESCLFNEQCEDVDFKTECKNERCACKFEMVPLVTVDGAVICTPVKPVDESTRTVDPAMI 299
+ C+ +EQC + + C N C C + PLV + P + + R DP +
Sbjct: 1209 KGCISDEQCSSREANSTCDNGYCICPTDK-PLVHGGKCIATCPEGFSNIAGRCYDPTTV 1266
>Z69661-2|CAA93494.1| 925|Caenorhabditis elegans Hypothetical
protein F48F7.4 protein.
Length = 925
Score = 28.3 bits (60), Expect = 6.2
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = -3
Query: 448 SLDSLSKETFIRRGFGVLKIVLFSR-HLALLKSRRTTQMMTNISAMPTRTPIIAGSTVLV 272
S +SK + R G ++ R H A ++ R N + PT T + A S+ +
Sbjct: 475 STTRMSKNSKGDRNEGKRELTFDERLHKARMQKSRVENEGVNGATSPTATTVAAPSSNVA 534
Query: 271 DSSTGFTGVHITAPSTVTSGTISN 200
+SST TSG++ N
Sbjct: 535 NSSTSALTPRSNGQKKETSGSVRN 558
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 6.2
Identities = 27/83 (32%), Positives = 38/83 (45%)
Frame = -3
Query: 355 SRRTTQMMTNISAMPTRTPIIAGSTVLVDSSTGFTGVHITAPSTVTSGTISNLQAQRSFL 176
S+ T ++ S+M T+TP + ST V+SST +P T T +IS + S +
Sbjct: 973 SQNTNPSTSSGSSMSTQTPQSSQSTSPVESSTSGATSSSGSPGT-TLTSISPSPSPSSTI 1031
Query: 175 HSVLKSTSSHCSLNKQDSLMLAG 107
S STS S Q S G
Sbjct: 1032 GSSQGSTSPVVSTISQGSTETPG 1054
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = -3
Query: 322 SAMPTRTPIIAGSTVLVDSSTGFTGVHITAPSTV--TSGTISN 200
SA + TP++ S+ + SS F ++PSTV TSG S+
Sbjct: 264 SAASSTTPVVLSSSTIQSSSGTFPSSVASSPSTVGSTSGAASS 306
>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform a protein.
Length = 2886
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = -3
Query: 316 MPTRTPIIAGSTVLVDSSTGFTGVHITAPSTVTSGTISNLQAQRSFLHSVLKSTSSHCSL 137
+PT P S V +ST T + ++ P+TVTS S++ + S H + T S CSL
Sbjct: 697 IPTSPPSCHSSHV-TSNSTHSTHISVSFPNTVTSA--SSILSNSSSPH---QPTPSLCSL 750
Query: 136 NKQDSL 119
+ SL
Sbjct: 751 PESSSL 756
>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
Length = 2914
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = -3
Query: 316 MPTRTPIIAGSTVLVDSSTGFTGVHITAPSTVTSGTISNLQAQRSFLHSVLKSTSSHCSL 137
+PT P S V +ST T + ++ P+TVTS S++ + S H + T S CSL
Sbjct: 697 IPTSPPSCHSSHV-TSNSTHSTHISVSFPNTVTSA--SSILSNSSSPH---QPTPSLCSL 750
Query: 136 NKQDSL 119
+ SL
Sbjct: 751 PESSSL 756
>AL110485-23|CAB60377.3| 770|Caenorhabditis elegans Hypothetical
protein Y46G5A.29 protein.
Length = 770
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 54 CTCHPDVPISN--HFDKCGKPASINESCLFNEQCEDVDFKTECKN 182
C C+P +N DKC N S FN++ V + +C+N
Sbjct: 390 CQCNPGYVGANCTEIDKCLDNECDNNSTCFNDKRSPVGYSCKCQN 434
>Z81093-3|CAB03147.1| 610|Caenorhabditis elegans Hypothetical
protein F58D2.2 protein.
Length = 610
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -3
Query: 322 SAMPTRTPIIAGSTVL--VDSSTGFTGVHITAPSTVTSGTIS 203
+AM T +P G+T L S+TG T T ST T+GT++
Sbjct: 569 TAMQTISPGKTGATTLGSTSSTTGITETTGTTGSTATTGTMA 610
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = -3
Query: 322 SAMPTRTPIIAGSTVLVDSSTGFTGVHITAPSTV--TSGTISN 200
SA + TP++ S+ + SS F ++PSTV TSG S+
Sbjct: 57 SAASSTTPVVLSSSTIQSSSGTFPSSVASSPSTVGSTSGAASS 99
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = -3
Query: 322 SAMPTRTPIIAGSTVLVDSSTGFTGVHITAPSTV--TSGTISN 200
SA + TP++ S+ + SS F ++PSTV TSG S+
Sbjct: 264 SAASSTTPVVLSSSTIQSSSGTFPSSVASSPSTVGSTSGAASS 306
>U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical
protein F30H5.3 protein.
Length = 1599
Score = 27.9 bits (59), Expect = 8.1
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Frame = +3
Query: 54 CTCHPD-VPISNHFDKCGKPASINES-CLFNEQCEDVDFKTECKNERCACKFEM--VPLV 221
CTC + V I + C + ES C + EQC V ++ C+ RC C ++ +P V
Sbjct: 133 CTCLSNFVAIQGY---CYLKKNPGESGCQYAEQCSAVWPESRCEKSRCECPEDVNGIPYV 189
Query: 222 ---TVDGAVIC 245
T DG V+C
Sbjct: 190 QAKTRDG-VVC 199
>AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cyclase
protein 23 protein.
Length = 1043
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +3
Query: 303 VLVGMALMFVIICVVLRLFSRARWRENRTIFNTP 404
+++G ++ +II +++ F +R ENR + NTP
Sbjct: 429 LIIGGCIVLLIILLIICFFILSRVCENRALANTP 462
>AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1073
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +3
Query: 303 VLVGMALMFVIICVVLRLFSRARWRENRTIFNTP 404
+++G ++ +II +++ F +R ENR + NTP
Sbjct: 459 LIIGGCIVLLIILLIICFFILSRVCENRALANTP 492
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,430,890
Number of Sequences: 27780
Number of extensions: 317716
Number of successful extensions: 1308
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1308
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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