Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2103
         (730 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    28   0.067
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    25   0.47 
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   3.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.8  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    22   5.8  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.8  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   5.8  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 28.3 bits (60), Expect = 0.067
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 108 KPQPAPTSFSYPQSAAHKPSLSGWQEKPAT 197
           +PQP  T+ S P  A+ +P+ S   +KP T
Sbjct: 400 EPQPTQTTESEPTQASEQPTESSTTQKPQT 429


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 404 WVRMTLLIICSSLLGVRILRSIISLNSFLILG 309
           W R     +C  LL V ILR+II     ++LG
Sbjct: 720 WERKRRQYLCPVLLRVSILRNIIVGTLMMVLG 751


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 99  TSYKPQPAPTSFSYPQSA 152
           T  KP+PAP S + P+ A
Sbjct: 254 TKSKPRPAPASRNAPEPA 271


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 156  HKPSLSGWQE 185
            HKPS S WQ+
Sbjct: 1159 HKPSTSSWQK 1168


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 389 ESFVPIVQFRSFR*FWYW*LTANRKWND 472
           E ++P+    +F  F Y     NRKW +
Sbjct: 158 EKWIPLCNSVTFSNFGYKQCVENRKWQN 185


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 389 ESFVPIVQFRSFR*FWYW*LTANRKWND 472
           E ++P+    +F  F Y     NRKW +
Sbjct: 391 EKWIPLCNSVTFSNFGYKQCVENRKWQN 418


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 389 ESFVPIVQFRSFR*FWYW*LTANRKWND 472
           E ++P+    +F  F Y     NRKW +
Sbjct: 391 EKWIPLCNSVTFSNFGYKQCVENRKWQN 418


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -3

Query: 338 ISLNSFLILGWLFW 297
           IS+     LGW FW
Sbjct: 560 ISIRPISTLGWFFW 573


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 574 DNPNILITETNTTIHXDLHRHIVL 645
           D P+IL    N   H DL  ++++
Sbjct: 319 DTPSILHELRNNYFHMDLENNVII 342


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,175
Number of Sequences: 336
Number of extensions: 2866
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)