Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2101
(740 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL807752-22|CAI12768.1| 2435|Homo sapiens ATP-binding cassette, ... 33 1.1
AF327705-1|AAK14335.1| 2436|Homo sapiens ABC transporter ABCA2 p... 33 1.1
AF327657-1|AAK14334.1| 2436|Homo sapiens ABC transporter ABCA2 p... 33 1.1
AF178941-1|AAG09372.1| 2436|Homo sapiens ATP-binding cassette su... 33 1.1
AB177854-1|BAD66832.1| 1440|Homo sapiens KIAA1062 splice variant... 33 1.1
AB028985-1|BAA83014.2| 1771|Homo sapiens KIAA1062 protein protein. 33 1.1
AY928141-1|AAY16618.1| 121|Homo sapiens immunoglobulin kappa li... 30 7.6
AY204751-1|AAP13576.1| 5058|Homo sapiens ABC A13 protein. 30 7.6
AK131360-1|BAD18512.1| 1186|Homo sapiens mRNA. protein. 30 7.6
AK128570-1|BAC87504.1| 851|Homo sapiens protein ( Homo sapiens ... 30 7.6
AF501281-1|AAO59914.1| 2127|Homo sapiens ATP binding cassette tr... 30 7.6
>AL807752-22|CAI12768.1| 2435|Homo sapiens ATP-binding cassette,
sub-family A (ABC1), membertor protein.
Length = 2435
Score = 33.1 bits (72), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 732 WFLXSNRPGLYGLRSPWLFLLRK 664
W++ + PG+YGL PW F L+K
Sbjct: 911 WYIEAVHPGMYGLPRPWYFPLQK 933
>AF327705-1|AAK14335.1| 2436|Homo sapiens ABC transporter ABCA2
protein.
Length = 2436
Score = 33.1 bits (72), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 732 WFLXSNRPGLYGLRSPWLFLLRK 664
W++ + PG+YGL PW F L+K
Sbjct: 912 WYIEAVHPGMYGLPRPWYFPLQK 934
>AF327657-1|AAK14334.1| 2436|Homo sapiens ABC transporter ABCA2
protein.
Length = 2436
Score = 33.1 bits (72), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 732 WFLXSNRPGLYGLRSPWLFLLRK 664
W++ + PG+YGL PW F L+K
Sbjct: 912 WYIEAVHPGMYGLPRPWYFPLQK 934
>AF178941-1|AAG09372.1| 2436|Homo sapiens ATP-binding cassette
sub-family A member 2 protein.
Length = 2436
Score = 33.1 bits (72), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 732 WFLXSNRPGLYGLRSPWLFLLRK 664
W++ + PG+YGL PW F L+K
Sbjct: 912 WYIEAVHPGMYGLPRPWYFPLQK 934
>AB177854-1|BAD66832.1| 1440|Homo sapiens KIAA1062 splice variant 1
protein.
Length = 1440
Score = 33.1 bits (72), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 732 WFLXSNRPGLYGLRSPWLFLLRK 664
W++ + PG+YGL PW F L+K
Sbjct: 261 WYIEAVHPGMYGLPRPWYFPLQK 283
>AB028985-1|BAA83014.2| 1771|Homo sapiens KIAA1062 protein protein.
Length = 1771
Score = 33.1 bits (72), Expect = 1.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 732 WFLXSNRPGLYGLRSPWLFLLRK 664
W++ + PG+YGL PW F L+K
Sbjct: 247 WYIEAVHPGMYGLPRPWYFPLQK 269
>AY928141-1|AAY16618.1| 121|Homo sapiens immunoglobulin kappa light
chain protein.
Length = 121
Score = 30.3 bits (65), Expect = 7.6
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 332 YDYTITFKNIPLNSFGFGDFKDFSIFTFALKPYVFCACLCRQSA 463
YD +I +IP G G DF++ +L+P F C+QS+
Sbjct: 51 YDASIRATDIPARFSGSGSGTDFTLTISSLEPDDFAVYYCQQSS 94
>AY204751-1|AAP13576.1| 5058|Homo sapiens ABC A13 protein.
Length = 5058
Score = 30.3 bits (65), Expect = 7.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 732 WFLXSNRPGLYGLRSPWLF 676
W+L + PG +GLR PW F
Sbjct: 3771 WYLSNLIPGTFGLRKPWYF 3789
>AK131360-1|BAD18512.1| 1186|Homo sapiens mRNA. protein.
Length = 1186
Score = 30.3 bits (65), Expect = 7.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 732 WFLXSNRPGLYGLRSPWLF 676
W+L + PG +GLR PW F
Sbjct: 31 WYLSNLIPGTFGLRKPWYF 49
>AK128570-1|BAC87504.1| 851|Homo sapiens protein ( Homo sapiens
cDNA FLJ46729 fis, clone TRACH3019370, weakly similar
to ATP-binding cassette, sub-family A, member 1. ).
Length = 851
Score = 30.3 bits (65), Expect = 7.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 732 WFLXSNRPGLYGLRSPWLF 676
W+L + PG +GLR PW F
Sbjct: 526 WYLSNLIPGTFGLRKPWYF 544
>AF501281-1|AAO59914.1| 2127|Homo sapiens ATP binding cassette
transporter A13 protein.
Length = 2127
Score = 30.3 bits (65), Expect = 7.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 732 WFLXSNRPGLYGLRSPWLF 676
W+L + PG +GLR PW F
Sbjct: 839 WYLSNLIPGTFGLRKPWYF 857
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,821,814
Number of Sequences: 237096
Number of extensions: 1181773
Number of successful extensions: 4772
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4772
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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