Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2101
         (740 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50071-6|AAQ91911.1| 1004|Caenorhabditis elegans Uncoordinated p...    28   8.0  
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p...    28   8.0  
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p...    28   8.0  
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p...    28   8.0  
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p...    28   8.0  
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr...    28   8.0  
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr...    28   8.0  
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr...    28   8.0  
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.       28   8.0  

>U50071-6|AAQ91911.1| 1004|Caenorhabditis elegans Uncoordinated
           protein 44, isoform g protein.
          Length = 1004

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 23/73 (31%), Positives = 33/73 (45%)
 Frame = +3

Query: 132 FFDLHVARHYVHSKLKGNKGVCERFFNVNVIAIRRHSYL*VLTF*MFNS*TESLKSQNKV 311
           F  LH+A HY H  +   + + E+  NVN  A    S L V T     +    L S+  +
Sbjct: 228 FTPLHIAAHYGHENV--GQLLLEKGANVNYQARHNISPLHVATKWGRTNMANLLLSRGAI 285

Query: 312 *FSEIMDMITQLH 350
             S   D++T LH
Sbjct: 286 IDSRTKDLLTPLH 298


>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
           protein 44, isoform a protein.
          Length = 2039

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 23/73 (31%), Positives = 33/73 (45%)
 Frame = +3

Query: 132 FFDLHVARHYVHSKLKGNKGVCERFFNVNVIAIRRHSYL*VLTF*MFNS*TESLKSQNKV 311
           F  LH+A HY H  +   + + E+  NVN  A    S L V T     +    L S+  +
Sbjct: 228 FTPLHIAAHYGHENV--GQLLLEKGANVNYQARHNISPLHVATKWGRTNMANLLLSRGAI 285

Query: 312 *FSEIMDMITQLH 350
             S   D++T LH
Sbjct: 286 IDSRTKDLLTPLH 298


>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
           protein 44, isoform e protein.
          Length = 1841

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 23/73 (31%), Positives = 33/73 (45%)
 Frame = +3

Query: 132 FFDLHVARHYVHSKLKGNKGVCERFFNVNVIAIRRHSYL*VLTF*MFNS*TESLKSQNKV 311
           F  LH+A HY H  +   + + E+  NVN  A    S L V T     +    L S+  +
Sbjct: 228 FTPLHIAAHYGHENV--GQLLLEKGANVNYQARHNISPLHVATKWGRTNMANLLLSRGAI 285

Query: 312 *FSEIMDMITQLH 350
             S   D++T LH
Sbjct: 286 IDSRTKDLLTPLH 298


>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
           protein 44, isoform c protein.
          Length = 1867

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 23/73 (31%), Positives = 33/73 (45%)
 Frame = +3

Query: 132 FFDLHVARHYVHSKLKGNKGVCERFFNVNVIAIRRHSYL*VLTF*MFNS*TESLKSQNKV 311
           F  LH+A HY H  +   + + E+  NVN  A    S L V T     +    L S+  +
Sbjct: 228 FTPLHIAAHYGHENV--GQLLLEKGANVNYQARHNISPLHVATKWGRTNMANLLLSRGAI 285

Query: 312 *FSEIMDMITQLH 350
             S   D++T LH
Sbjct: 286 IDSRTKDLLTPLH 298


>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
           protein 44, isoform f protein.
          Length = 6994

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 23/73 (31%), Positives = 33/73 (45%)
 Frame = +3

Query: 132 FFDLHVARHYVHSKLKGNKGVCERFFNVNVIAIRRHSYL*VLTF*MFNS*TESLKSQNKV 311
           F  LH+A HY H  +   + + E+  NVN  A    S L V T     +    L S+  +
Sbjct: 228 FTPLHIAAHYGHENV--GQLLLEKGANVNYQARHNISPLHVATKWGRTNMANLLLSRGAI 285

Query: 312 *FSEIMDMITQLH 350
             S   D++T LH
Sbjct: 286 IDSRTKDLLTPLH 298


>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
           protein.
          Length = 1815

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 23/73 (31%), Positives = 33/73 (45%)
 Frame = +3

Query: 132 FFDLHVARHYVHSKLKGNKGVCERFFNVNVIAIRRHSYL*VLTF*MFNS*TESLKSQNKV 311
           F  LH+A HY H  +   + + E+  NVN  A    S L V T     +    L S+  +
Sbjct: 228 FTPLHIAAHYGHENV--GQLLLEKGANVNYQARHNISPLHVATKWGRTNMANLLLSRGAI 285

Query: 312 *FSEIMDMITQLH 350
             S   D++T LH
Sbjct: 286 IDSRTKDLLTPLH 298


>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
           protein.
          Length = 1867

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 23/73 (31%), Positives = 33/73 (45%)
 Frame = +3

Query: 132 FFDLHVARHYVHSKLKGNKGVCERFFNVNVIAIRRHSYL*VLTF*MFNS*TESLKSQNKV 311
           F  LH+A HY H  +   + + E+  NVN  A    S L V T     +    L S+  +
Sbjct: 228 FTPLHIAAHYGHENV--GQLLLEKGANVNYQARHNISPLHVATKWGRTNMANLLLSRGAI 285

Query: 312 *FSEIMDMITQLH 350
             S   D++T LH
Sbjct: 286 IDSRTKDLLTPLH 298


>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
           protein.
          Length = 6994

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 23/73 (31%), Positives = 33/73 (45%)
 Frame = +3

Query: 132 FFDLHVARHYVHSKLKGNKGVCERFFNVNVIAIRRHSYL*VLTF*MFNS*TESLKSQNKV 311
           F  LH+A HY H  +   + + E+  NVN  A    S L V T     +    L S+  +
Sbjct: 228 FTPLHIAAHYGHENV--GQLLLEKGANVNYQARHNISPLHVATKWGRTNMANLLLSRGAI 285

Query: 312 *FSEIMDMITQLH 350
             S   D++T LH
Sbjct: 286 IDSRTKDLLTPLH 298


>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
          Length = 1786

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 23/73 (31%), Positives = 33/73 (45%)
 Frame = +3

Query: 132 FFDLHVARHYVHSKLKGNKGVCERFFNVNVIAIRRHSYL*VLTF*MFNS*TESLKSQNKV 311
           F  LH+A HY H  +   + + E+  NVN  A    S L V T     +    L S+  +
Sbjct: 228 FTPLHIAAHYGHENV--GQLLLEKGANVNYQARHNISPLHVATKWGRTNMANLLLSRGAI 285

Query: 312 *FSEIMDMITQLH 350
             S   D++T LH
Sbjct: 286 IDSRTKDLLTPLH 298


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,521,552
Number of Sequences: 27780
Number of extensions: 199923
Number of successful extensions: 390
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)