Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2100
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr... 132 2e-31
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr... 132 2e-31
U58758-1|AAB93429.2| 819|Caenorhabditis elegans Hypothetical pr... 126 2e-29
AC006776-1|AAF60626.2| 616|Caenorhabditis elegans Hypothetical ... 99 2e-21
AF106576-1|AAC78177.2| 664|Caenorhabditis elegans Hypothetical ... 30 1.8
Z31590-7|CAA83463.1| 361|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81564-9|CAB04575.1| 724|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 29 4.2
U40959-5|AAA81769.1| 531|Caenorhabditis elegans Udp-glucuronosy... 29 4.2
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z70782-8|CAA94845.2| 536|Caenorhabditis elegans Hypothetical pr... 27 9.8
U40952-9|AAA81742.1| 253|Caenorhabditis elegans Hypothetical pr... 27 9.8
>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 132 bits (320), Expect = 2e-31
Identities = 65/127 (51%), Positives = 89/127 (70%), Gaps = 1/127 (0%)
Frame = +3
Query: 3 RFVVSLLPGKLSEIE-AEGIHKVFKLQTTISMTCMNAFDYNCCLKKYDKVEEILREFYDL 179
+FVV L PGKL E+E + +H+VFKLQ I+ TCM FD CL+ Y E I +EFYD
Sbjct: 1002 KFVVKLSPGKLRELERGQDLHQVFKLQAVINTTCMVLFDAAGCLRTYTSPEAITQEFYDS 1061
Query: 180 RVKYYVRRKDYLEGQLQAEADKLSNQARFIL*KCDKGLVVENKKRKAMVEELIKRGYAPD 359
R + YV+RK+YL G LQA++ +L+NQARFIL K + +V+ENKK+ A+V+ LIK + D
Sbjct: 1062 RQEKYVQRKEYLLGVLQAQSKRLTNQARFILAKINNEIVLENKKKAAIVDVLIKMKFDAD 1121
Query: 360 PIADWKK 380
P+ WK+
Sbjct: 1122 PVKKWKE 1128
>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 132 bits (320), Expect = 2e-31
Identities = 65/127 (51%), Positives = 89/127 (70%), Gaps = 1/127 (0%)
Frame = +3
Query: 3 RFVVSLLPGKLSEIE-AEGIHKVFKLQTTISMTCMNAFDYNCCLKKYDKVEEILREFYDL 179
+FVV L PGKL E+E + +H+VFKLQ I+ TCM FD CL+ Y E I +EFYD
Sbjct: 1002 KFVVKLSPGKLRELERGQDLHQVFKLQAVINTTCMVLFDAAGCLRTYTSPEAITQEFYDS 1061
Query: 180 RVKYYVRRKDYLEGQLQAEADKLSNQARFIL*KCDKGLVVENKKRKAMVEELIKRGYAPD 359
R + YV+RK+YL G LQA++ +L+NQARFIL K + +V+ENKK+ A+V+ LIK + D
Sbjct: 1062 RQEKYVQRKEYLLGVLQAQSKRLTNQARFILAKINNEIVLENKKKAAIVDVLIKMKFDAD 1121
Query: 360 PIADWKK 380
P+ WK+
Sbjct: 1122 PVKKWKE 1128
>U58758-1|AAB93429.2| 819|Caenorhabditis elegans Hypothetical
protein ZK1127.7 protein.
Length = 819
Score = 126 bits (303), Expect = 2e-29
Identities = 63/127 (49%), Positives = 87/127 (68%), Gaps = 1/127 (0%)
Frame = +3
Query: 3 RFVVSLLPGKLSEIE-AEGIHKVFKLQTTISMTCMNAFDYNCCLKKYDKVEEILREFYDL 179
+FVV L PGKL E+E + +H+VFKLQ I+ TCM FD L+ Y E I +EFYD
Sbjct: 575 KFVVKLSPGKLRELERGQDLHQVFKLQAVINTTCMVLFDAAGWLRTYTSPEAITQEFYDS 634
Query: 180 RVKYYVRRKDYLEGQLQAEADKLSNQARFIL*KCDKGLVVENKKRKAMVEELIKRGYAPD 359
R + YV+RK+YL G LQA++ +L+NQARFIL + +V+ENKK+ A+V+ LIK + D
Sbjct: 635 RQEKYVQRKEYLLGVLQAQSKRLTNQARFILATINNKIVLENKKKTAIVDVLIKMKFDAD 694
Query: 360 PIADWKK 380
P+ WK+
Sbjct: 695 PVKKWKE 701
>AC006776-1|AAF60626.2| 616|Caenorhabditis elegans Hypothetical
protein Y46H3C.4 protein.
Length = 616
Score = 99 bits (238), Expect = 2e-21
Identities = 49/102 (48%), Positives = 70/102 (68%)
Frame = +3
Query: 75 LQTTISMTCMNAFDYNCCLKKYDKVEEILREFYDLRVKYYVRRKDYLEGQLQAEADKLSN 254
LQ+ I M+ M FD CL+ E I +EFYD R + Y++RK+YL LQA++ +L+N
Sbjct: 262 LQSVICMSSMVLFDAAGCLRTSTSPEAITQEFYDSRQEKYLQRKEYLLEVLQAQSKRLTN 321
Query: 255 QARFIL*KCDKGLVVENKKRKAMVEELIKRGYAPDPIADWKK 380
QARFIL K +K +V ENKK+ A+V++LIK G+ DP+ WK+
Sbjct: 322 QARFILAKINKEIVFENKKKVAIVDDLIKMGFDADPVKKWKE 363
>AF106576-1|AAC78177.2| 664|Caenorhabditis elegans Hypothetical
protein W07E6.1 protein.
Length = 664
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 309 KRKAMVEELIKRGYAPDPIADWKK 380
KR+ + + LI RG DP ADW K
Sbjct: 241 KRRDLAKNLINRGMNVDPAADWTK 264
>Z31590-7|CAA83463.1| 361|Caenorhabditis elegans Hypothetical
protein R01H10.6 protein.
Length = 361
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -1
Query: 337 MSSSTIAFLFLFSTTNPLSH 278
+S++T F F+F+TTNP SH
Sbjct: 107 VSATTTKFEFIFTTTNPASH 126
>Z81564-9|CAB04575.1| 724|Caenorhabditis elegans Hypothetical
protein K05C4.9 protein.
Length = 724
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Frame = +3
Query: 9 VVSLLPG--KLSEIEAEGIHKVFKLQTTI--SMTCMNAF---DYNCCLKKYDKVEEILRE 167
++S LP +++ ++ + H VF + + S T +F +Y LKK D V + ++
Sbjct: 278 LLSFLPNLQQIALMDCQLKHAVFSTEIRVLNSATLETSFQTLNYYSKLKKSDSVMKCFQD 337
Query: 168 FYDLRVKYYVRRKDY 212
+ L +YY + K+Y
Sbjct: 338 IFFLLKEYYTQNKEY 352
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +2
Query: 197 PSQGLPRGTVAGRSRQAVQSGSVYPIKV*QRISRREQEKKGYG*RTHQERLRSRPNRGLE 376
P++ P+ A ++Q YP Q+ +REQ+++ R HQ RL+ + +
Sbjct: 194 PARSAPQRVPAPPAQQYAPRAPEYP-SAQQQQQQREQQQREQQHREHQARLQQHQQQQQQ 252
Query: 377 EASQQ 391
+ QQ
Sbjct: 253 QQQQQ 257
>U40959-5|AAA81769.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein46 protein.
Length = 531
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 269 PIKV*QRISRREQEKKGYG*RTHQERLRSRPNRGLEEA 382
P Q ++ R EKKG+G R H+++L + P +E+A
Sbjct: 392 PFMFDQNLNSRAVEKKGWGIRRHKKQLLTEPEE-IEKA 428
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2
Query: 234 RPATVPRGNPCD 199
RP T PRGNPCD
Sbjct: 354 RPGTRPRGNPCD 365
>Z70782-8|CAA94845.2| 536|Caenorhabditis elegans Hypothetical
protein R04B5.9 protein.
Length = 536
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 269 PIKV*QRISRREQEKKGYG*RTHQERLRSRPNRGLEEASQQ 391
P Q ++ R EKKG+G R +++ + PN +EEA ++
Sbjct: 396 PFMFDQNLNSRAIEKKGWGIRRDKKQFLTEPN-AIEEAIRE 435
>U40952-9|AAA81742.1| 253|Caenorhabditis elegans Hypothetical
protein C03B1.4 protein.
Length = 253
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 102 MNAFDYNCCLKKYDKVEEILREFYDLRVKYYVRRKDY 212
M+ +C + D+ EE+L+E+ + + YY+ R D+
Sbjct: 170 MSETKLDCEMYIKDRFEELLQEYQESKNTYYLARADF 206
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,318,761
Number of Sequences: 27780
Number of extensions: 202175
Number of successful extensions: 520
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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