Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2092
(750 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0641 - 4697273-4697672,4697921-4698102,4698218-4698403,469... 112 3e-25
04_04_0075 - 22542486-22542882,22543181-22543362,22543452-225436... 108 5e-24
02_04_0319 - 22006550-22006952,22007260-22007441,22007522-220077... 106 2e-23
06_03_0968 - 26402154-26403834,26404322-26404383,26404473-264046... 75 8e-14
08_02_1014 - 23586552-23587224,23587402-23587463,23587735-235879... 66 3e-11
06_01_0588 - 4224348-4224516,4224674-4224767,4224872-4225490,422... 60 2e-09
09_04_0435 - 17545879-17546605,17546721-17546782,17547123-175473... 59 3e-09
02_02_0236 + 8135641-8135795,8136167-8136557,8136640-8136931,813... 57 1e-08
02_05_1059 + 33815979-33816235,33816467-33816732,33817149-338171... 56 3e-08
03_01_0658 + 4818401-4818540,4818605-4819201,4819694-4819949,482... 51 9e-07
11_06_0151 - 20643032-20643085,20643202-20643307,20643415-206434... 41 0.001
12_02_0381 + 18376045-18376114,18376270-18376420,18376524-183766... 40 0.003
01_06_0864 - 32546696-32546803,32546881-32546961,32547134-325472... 38 0.011
04_04_1365 - 32967604-32968367,32969097-32969221,32969583-32969632 33 0.24
06_02_0244 - 13445023-13445400,13445495-13446823 30 2.3
08_02_1337 - 26238506-26238737,26239728-26240703,26241266-26242802 29 3.0
03_05_0383 + 23656041-23656096,23657189-23657255,23657599-236577... 29 3.0
08_02_1331 + 26195949-26196132,26196606-26196710,26197270-261981... 28 6.9
>03_01_0641 -
4697273-4697672,4697921-4698102,4698218-4698403,
4699287-4699385,4700028-4700144,4700698-4700814
Length = 366
Score = 112 bits (269), Expect = 3e-25
Identities = 50/81 (61%), Positives = 62/81 (76%)
Frame = +3
Query: 435 PTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCND 614
PT VH+ FQG LT+ETRCL CETV+ +DE FFDL +D+ QN+SIT CLK FS TETL +
Sbjct: 165 PTLVHKCFQGILTNETRCLRCETVTDRDETFFDLSLDIEQNSSITSCLKNFSSTETLNAE 224
Query: 615 NKFKCDNCSSYXEAXKRMRVE 677
+KF CD C S EA KRM+++
Sbjct: 225 DKFFCDKCCSLQEAQKRMKIK 245
Score = 41.5 bits (93), Expect = 7e-04
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 7/55 (12%)
Frame = +2
Query: 269 FDNYMQQDAHEFLNFLINHINEI------ILAERNQSTLKVQKNNSGE-NVTCNG 412
F +YM QDAHEFLNFL+N + +I ++AE +++ ++KN++G NV NG
Sbjct: 105 FRSYMHQDAHEFLNFLLNELVDILEKESKVVAEPCENS-SLKKNSNGPINVQLNG 158
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +3
Query: 180 MGANISQLERDIGSEQFPPNEHYFGLVNRNLTITCNKM 293
MGA S+LE+ +G EQFP E YFGL N T CN +
Sbjct: 1 MGAASSRLEKALG-EQFPEGERYFGLENFGNTCYCNSV 37
>04_04_0075 -
22542486-22542882,22543181-22543362,22543452-22543637,
22543959-22544057,22546198-22546314,22547739-22547855
Length = 365
Score = 108 bits (259), Expect = 5e-24
Identities = 49/80 (61%), Positives = 61/80 (76%)
Frame = +3
Query: 438 TWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDN 617
T VH+ FQG LT+ETRCL CETV+++DE FFDL VD+ QN+SIT CLK F TETL ++
Sbjct: 166 TLVHKNFQGILTNETRCLRCETVTARDETFFDLSVDIEQNSSITSCLKNFCSTETLNAED 225
Query: 618 KFKCDNCSSYXEAXKRMRVE 677
KF CD C S EA KRM+++
Sbjct: 226 KFFCDKCCSLQEAQKRMKIK 245
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +2
Query: 269 FDNYMQQDAHEFLNFLINHINEIILAERN 355
F +YM QDAHEFLNFL+N + +I+ E N
Sbjct: 105 FRSYMHQDAHEFLNFLLNELVDILEKESN 133
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +3
Query: 180 MGANISQLERDIGSEQFPPNEHYFGLVNRNLTITCNKM 293
MGA+ S+LE+ +G +QFP E YFGL N T CN +
Sbjct: 1 MGASGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSV 37
>02_04_0319 -
22006550-22006952,22007260-22007441,22007522-22007704,
22008144-22008242,22008999-22009115,22010476-22010739
Length = 415
Score = 106 bits (254), Expect = 2e-23
Identities = 46/80 (57%), Positives = 60/80 (75%)
Frame = +3
Query: 438 TWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDN 617
T VH FQG LT+ET+CL C+T+++KDE FFDL +DV QN+S+T CLK F TE L ++
Sbjct: 214 TLVHRTFQGILTNETKCLMCDTITAKDETFFDLSIDVEQNSSLTSCLKSFFSTEILNGED 273
Query: 618 KFKCDNCSSYXEAXKRMRVE 677
KF CD CSS EA KRM+++
Sbjct: 274 KFFCDKCSSLQEAHKRMKIK 293
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Frame = +2
Query: 269 FDNYMQQDAHEFLNFLINHINEII-----LAERNQSTLKVQKNNSGENVTCNG 412
F +YM QDAHEF NFL+N I +I+ A + T + +N N NG
Sbjct: 154 FRSYMHQDAHEFWNFLVNDIIDILEEDCRTANSSPETTPEEVSNGAANALANG 206
Score = 35.5 bits (78), Expect = 0.045
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 180 MGANISQLERDIGSEQFPPNEHYFGLVNRNLTITCNKM 293
+GA +S+LE+ +G + FP YFGL N T CN +
Sbjct: 50 LGAGVSKLEKALG-DHFPEGARYFGLENFGNTCYCNSV 86
>06_03_0968 -
26402154-26403834,26404322-26404383,26404473-26404682,
26404776-26404860,26405461-26405618,26405745-26405868,
26405955-26406123,26406202-26406287,26406379-26406467,
26406564-26406735,26407820-26408193
Length = 1069
Score = 74.5 bits (175), Expect = 8e-14
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +3
Query: 420 PHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDV-GQNTSITHCLKCFSDT 596
P E T + IF G L S+ +C C VS++ E+ DL V++ G S+ CL F+
Sbjct: 319 PSTQETTLIQHIFGGRLQSQVQCTACGMVSNRYENMMDLTVEIHGDADSLEECLDKFTAV 378
Query: 597 ETLCNDNKFKCDNCSSYXEAXKRMRV 674
E L DNK+KCD CS Y +A KR+ V
Sbjct: 379 EWLDGDNKYKCDGCSDYVKAQKRLTV 404
>08_02_1014 -
23586552-23587224,23587402-23587463,23587735-23587950,
23588125-23588209,23589232-23589389,23589505-23589625,
23590081-23590243,23590330-23590415,23590660-23590742,
23590816-23591677,23593266-23593693
Length = 978
Score = 66.1 bits (154), Expect = 3e-11
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = +3
Query: 402 RVMGSVPHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDV-GQNTSITHCL 578
R G+ + E T + IF G L S+ RC C+ S + E DL V++ G +S+ L
Sbjct: 556 RKSGTHRLHEETTLMQLIFGGYLRSKIRCTRCDATSEQHERILDLTVEIDGDISSLEGAL 615
Query: 579 KCFSDTETLCNDNKFKCDNCSSYXEAXKRMRV 674
+ F+ TE L DNK+KC C S+ A K++ +
Sbjct: 616 ERFTSTEVLDGDNKYKCSRCKSHERAKKKLTI 647
>06_01_0588 -
4224348-4224516,4224674-4224767,4224872-4225490,
4225609-4225734,4225819-4226487,4226728-4226853,
4226940-4227266,4227366-4227439,4228469-4228583,
4228871-4229164
Length = 870
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +3
Query: 420 PHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTE 599
P E + VH+IF G L S+ +C C S+K + F DL +D+G+ TS+ L+ F+ E
Sbjct: 142 PSAYEKSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRALQNFTAEE 201
Query: 600 TLCNDNK-FKCDNCSSYXEAXKRMRVE 677
L K ++C C A K+ ++
Sbjct: 202 LLDGGEKQYQCQRCRKKVVAKKKFTID 228
>09_04_0435 -
17545879-17546605,17546721-17546782,17547123-17547335,
17547506-17547590,17547904-17548061,17548174-17548294,
17548765-17548927,17548973-17549097,17550800-17550888,
17550970-17551636,17552671-17552717,17553506-17553862
Length = 937
Score = 59.3 bits (137), Expect = 3e-09
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +3
Query: 432 EPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDV-GQNTSITHCLKCFSDTETLC 608
E T V IF G L S+ +C C+ S + E DL V++ G ++ L F+ TE L
Sbjct: 508 ETTLVQLIFGGYLRSKIKCTMCQGSSEQCERILDLTVEIDGDINTLEEALHRFTSTEILD 567
Query: 609 NDNKFKCDNCSSYXEAXKRMRV 674
DN++ C C SY A K++ +
Sbjct: 568 GDNRYNCSRCKSYERAKKKLTI 589
>02_02_0236 +
8135641-8135795,8136167-8136557,8136640-8136931,
8137117-8137271,8137363-8137451,8137623-8137967,
8139046-8139169,8139424-8139581,8139673-8139757,
8140094-8140306,8141314-8141375,8141466-8141951,
8142472-8142568
Length = 883
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +3
Query: 432 EPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDV-GQNTSITHCLKCFSDTETLC 608
E T + ++F G L S+ +CL C S + E+ DL +++ G S+ L F+ E L
Sbjct: 502 ETTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQFTAPEDLD 561
Query: 609 NDNKFKCDNCSSYXEAXKRMRV 674
+N +KC CS+Y +A K++ V
Sbjct: 562 GENMYKCGRCSAYVKARKQLSV 583
>02_05_1059 +
33815979-33816235,33816467-33816732,33817149-33817192,
33817363-33817539,33817638-33817964,33818067-33818192,
33818518-33818622,33818815-33820125,33820221-33820382,
33820416-33820517,33820549-33821272,33821358-33821451,
33821824-33821986
Length = 1285
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +3
Query: 420 PHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTE 599
P E + VH IF G L S+ RC C S+K + F DL +++ ++ L+ F+ E
Sbjct: 229 PSAYEKSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEIANAATLVKALQHFTAEE 288
Query: 600 TLCNDNK-FKCDNCSSYXEAXKRMRVE 677
L K + C++C A KR +E
Sbjct: 289 LLDGGEKQYNCEHCRQKVVAKKRFMIE 315
>03_01_0658 +
4818401-4818540,4818605-4819201,4819694-4819949,
4820038-4820723,4821009-4821147,4821378-4821514,
4821805-4822077,4822175-4822382,4822660-4822731,
4823230-4823460,4824269-4824532,4825127-4825268,
4825355-4825467
Length = 1085
Score = 51.2 bits (117), Expect = 9e-07
Identities = 26/94 (27%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Frame = +3
Query: 411 GSVPHNTEP---TWVHEIFQGTLTSETRCLNC---ETVSSKDEHFFDLQVDVGQNTSITH 572
GS+ H+ P T V +F+G+++ TRC +C SSK E F++L++++ ++
Sbjct: 219 GSLSHSKVPGARTIVQHLFRGSVSHVTRCSSCGRDSEASSKMEDFYELELNIKGLNNLEQ 278
Query: 573 CLKCFSDTETLCNDNKFKCDNCSSYXEAXKRMRV 674
L + TE L +N++ C++C +A + +++
Sbjct: 279 SLDDYLSTEALDGENQYFCESCQKRVDATRCIKL 312
>11_06_0151 -
20643032-20643085,20643202-20643307,20643415-20643495,
20643588-20643715,20643829-20643903,20644853-20645374,
20646622-20646687,20647990-20648076,20648173-20648247,
20648705-20648821,20648932-20649015,20649152-20649217,
20649352-20649417,20650079-20650150,20650231-20650332,
20650428-20650605,20650700-20650755,20653159-20653269,
20653354-20653422,20653558-20653741,20653826-20653914,
20654070-20654147,20654509-20654631,20654755-20654874,
20654975-20655055,20655285-20655431,20655533-20655611,
20657114-20657223,20659138-20659236,20659467-20659582,
20659673-20659781,20659839-20660069,20660152-20660417,
20661349-20661506,20661601-20661751,20661897-20661966,
20662203-20662232
Length = 1451
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +3
Query: 444 VHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKF 623
+ ++F+G + C+N + S++ E F+DLQ+DV + + + E L DNK+
Sbjct: 310 IEKLFEGHHINYIECINVDYKSNRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKY 369
Query: 624 KCDN 635
+N
Sbjct: 370 HAEN 373
>12_02_0381 +
18376045-18376114,18376270-18376420,18376524-18376681,
18378680-18378945,18379025-18379243,18379309-18379417,
18379488-18379603,18379935-18380033,18381447-18381556,
18382928-18383006,18383127-18383273,18383363-18383443,
18383529-18383648,18383902-18384024,18384276-18384353,
18384459-18384547,18384653-18384761,18385018-18385086,
18385200-18385310,18385657-18385712,18385808-18385985,
18386065-18386166,18386243-18386314,18386489-18386554,
18386674-18386739,18386853-18386936,18387080-18387196,
18388077-18388163,18389321-18389341
Length = 1050
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/63 (26%), Positives = 34/63 (53%)
Frame = +3
Query: 444 VHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKF 623
+ ++F+G + C+N + S++ E F+DLQ+DV + + + + E L DNK+
Sbjct: 296 IEQLFEGHHINYIECINVDYKSNRKESFYDLQLDVKGCSDVYASFDKYVEVERLEGDNKY 355
Query: 624 KCD 632
+
Sbjct: 356 HAE 358
>01_06_0864 -
32546696-32546803,32546881-32546961,32547134-32547250,
32548264-32548338,32548618-32548680,32549122-32549187,
32549254-32549325,32549403-32549504,32549588-32549765,
32549871-32549926,32551578-32551688,32551797-32551865,
32551960-32552068,32552176-32552327,32552398-32552475,
32554257-32554379,32555527-32555646,32555729-32555809,
32555881-32556027,32556112-32556190,32557223-32557297,
32558004-32558113,32558984-32559082,32559700-32559815,
32559914-32560022,32560098-32560229,32560389-32560591,
32561428-32561585,32561668-32561797,32562529-32562607,
32562806-32562829
Length = 1073
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/63 (25%), Positives = 34/63 (53%)
Frame = +3
Query: 444 VHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKF 623
+ ++F+G + C+N + S++ E F+DL +DV + + + + E L DNK+
Sbjct: 250 IQQLFEGHHMNYIECINVDYKSTRKESFYDLALDVKGCSDVYASFDKYVEVERLEGDNKY 309
Query: 624 KCD 632
+ +
Sbjct: 310 QSE 312
>04_04_1365 - 32967604-32968367,32969097-32969221,32969583-32969632
Length = 312
Score = 33.1 bits (72), Expect = 0.24
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 28/104 (26%)
Frame = +3
Query: 447 HEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDV-------------------------G 551
H +F G L S+ C +C S+ E D+ +D+ G
Sbjct: 67 HRVFSGILRSDVTCTHCGFTSTTFEPCMDISLDLDAGYNNSLGVANPKVHVRNGERSSGG 126
Query: 552 QNTSIT---HCLKCFSDTETLCNDNKFKCDNCSSYXEAXKRMRV 674
NT ++ CL+ F+ E L + KF C+ C E+ K+M +
Sbjct: 127 TNTKVSTLMRCLERFTRAERLDAEQKFFCERCKERQESLKQMSI 170
Score = 31.9 bits (69), Expect = 0.56
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +2
Query: 275 NYMQQDAHEFLNFLINHINEIILAERNQS 361
+Y QQDAHEF +++HI+E I ++++S
Sbjct: 27 SYEQQDAHEFFISILDHIHENIKDDQHKS 55
>06_02_0244 - 13445023-13445400,13445495-13446823
Length = 568
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +3
Query: 474 SETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKFKCD 632
++ R +N ET S K F QVD +N E L D+K +CD
Sbjct: 114 ADLRLINIETTSGKK---FQFQVDQSRNVKYLKSKLAVEGDEDLGEDHKLECD 163
>08_02_1337 - 26238506-26238737,26239728-26240703,26241266-26242802
Length = 914
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 420 PHNTEPTWVHEIFQGTLTSETRCLNCETVSSKDEHFFDLQV 542
P + PT + IF L+ T C C S + F+DL V
Sbjct: 415 PSSVAPTVIDSIFGSELSVTTSCKRCSFKSYSCDVFYDLSV 455
>03_05_0383 +
23656041-23656096,23657189-23657255,23657599-23657745,
23658094-23658178,23658380-23658551,23660056-23660176,
23660431-23660550,23660861-23661073,23661154-23661213,
23661306-23661424,23661609-23661667,23661798-23662132
Length = 517
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +3
Query: 411 GSVPHNTEPTWVHEIFQGTLTSET-RCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCF 587
G + + P W+ + T T RC +CE + KD + L D G+ CL+C
Sbjct: 223 GHIEYRAHPFWMQKYCPAHETDRTPRCCSCERMEPKDSKYITL--DDGRKL----CLECL 276
Query: 588 S 590
+
Sbjct: 277 N 277
>08_02_1331 +
26195949-26196132,26196606-26196710,26197270-26198127,
26198669-26199458,26200240-26200329,26200636-26200712,
26200797-26201383
Length = 896
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 528 FDLQVDVGQNTSITHCLKCFSDTETLCNDNKFKCDNCSSYXE 653
+D D+ SI CL+ + +TE + ++ C+NCS E
Sbjct: 217 YDKAHDINSLASIEKCLELYLETE----EREWACENCSKVVE 254
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,675,773
Number of Sequences: 37544
Number of extensions: 323993
Number of successful extensions: 642
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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