Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2090
(650 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 176 1e-44
03_01_0547 + 4093196-4093657,4094267-4095148 176 1e-44
03_01_0544 + 4082528-4082989,4083585-4084466 176 1e-44
03_01_0543 + 4076981-4077442,4078145-4079026 176 1e-44
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 114 5e-26
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 114 5e-26
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 109 2e-24
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 90 2e-18
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 88 5e-18
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 65 4e-11
02_04_0462 + 23131433-23132836 63 2e-10
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 44 8e-05
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 38 0.005
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 37 0.012
03_05_0511 + 25056018-25059107 36 0.028
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 35 0.049
02_04_0148 - 20198407-20201424 35 0.065
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 31 0.80
04_01_0103 + 1082077-1082167,1083037-1085477 31 0.80
02_04_0017 + 18937774-18937864,18938505-18940945 31 0.80
01_06_0662 + 30987187-30987277,30987825-30990214 31 0.80
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 31 1.1
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 29 3.2
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 28 5.6
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 27 9.8
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 176 bits (428), Expect = 1e-44
Identities = 84/125 (67%), Positives = 94/125 (75%)
Frame = +2
Query: 182 QMGKGSFKYAWVLDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGTX 361
+M K SFKYAWVLDKLKA+R RGITIDIALW ET KYY T+IDAPGHRDFI NMITGT
Sbjct: 48 EMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTS 107
Query: 362 HADXAXLIVPAGTGEFEAGISXNGQTREHALLAXTLGVKQLXXXAXKXXXTEPPYXXPRF 541
AD A LI+ + TG FEAGIS +GQTREHALLA TLGVKQ+ K T P Y R+
Sbjct: 108 QADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARY 167
Query: 542 EEITQ 556
+EI +
Sbjct: 168 DEIVK 172
Score = 83.8 bits (198), Expect = 1e-16
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = +3
Query: 39 MGKEXTHINIVVIGHVDSGKSTTTGHLIYKXGGIDKRTIXKFE 167
MGKE THINIVVIGHVDSGKSTTTGHLIYK GGIDKR I +FE
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFE 43
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +3
Query: 555 KEVSSYXKNIGYXPTAXAXXPLAGWHGDNMXE 650
KEVSSY K +GY P P++G+ GDNM E
Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIE 203
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 176 bits (428), Expect = 1e-44
Identities = 84/125 (67%), Positives = 94/125 (75%)
Frame = +2
Query: 182 QMGKGSFKYAWVLDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGTX 361
+M K SFKYAWVLDKLKA+R RGITIDIALW ET KYY T+IDAPGHRDFI NMITGT
Sbjct: 48 EMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTS 107
Query: 362 HADXAXLIVPAGTGEFEAGISXNGQTREHALLAXTLGVKQLXXXAXKXXXTEPPYXXPRF 541
AD A LI+ + TG FEAGIS +GQTREHALLA TLGVKQ+ K T P Y R+
Sbjct: 108 QADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARY 167
Query: 542 EEITQ 556
+EI +
Sbjct: 168 DEIVK 172
Score = 83.8 bits (198), Expect = 1e-16
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = +3
Query: 39 MGKEXTHINIVVIGHVDSGKSTTTGHLIYKXGGIDKRTIXKFE 167
MGKE THINIVVIGHVDSGKSTTTGHLIYK GGIDKR I +FE
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFE 43
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +3
Query: 555 KEVSSYXKNIGYXPTAXAXXPLAGWHGDNMXE 650
KEVSSY K +GY P P++G+ GDNM E
Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIE 203
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 176 bits (428), Expect = 1e-44
Identities = 84/125 (67%), Positives = 94/125 (75%)
Frame = +2
Query: 182 QMGKGSFKYAWVLDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGTX 361
+M K SFKYAWVLDKLKA+R RGITIDIALW ET KYY T+IDAPGHRDFI NMITGT
Sbjct: 48 EMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTS 107
Query: 362 HADXAXLIVPAGTGEFEAGISXNGQTREHALLAXTLGVKQLXXXAXKXXXTEPPYXXPRF 541
AD A LI+ + TG FEAGIS +GQTREHALLA TLGVKQ+ K T P Y R+
Sbjct: 108 QADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARY 167
Query: 542 EEITQ 556
+EI +
Sbjct: 168 DEIVK 172
Score = 83.8 bits (198), Expect = 1e-16
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = +3
Query: 39 MGKEXTHINIVVIGHVDSGKSTTTGHLIYKXGGIDKRTIXKFE 167
MGKE THINIVVIGHVDSGKSTTTGHLIYK GGIDKR I +FE
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFE 43
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +3
Query: 555 KEVSSYXKNIGYXPTAXAXXPLAGWHGDNMXE 650
KEVSSY K +GY P P++G+ GDNM E
Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIE 203
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 176 bits (428), Expect = 1e-44
Identities = 84/125 (67%), Positives = 94/125 (75%)
Frame = +2
Query: 182 QMGKGSFKYAWVLDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGTX 361
+M K SFKYAWVLDKLKA+R RGITIDIALW ET KYY T+IDAPGHRDFI NMITGT
Sbjct: 48 EMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTS 107
Query: 362 HADXAXLIVPAGTGEFEAGISXNGQTREHALLAXTLGVKQLXXXAXKXXXTEPPYXXPRF 541
AD A LI+ + TG FEAGIS +GQTREHALLA TLGVKQ+ K T P Y R+
Sbjct: 108 QADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARY 167
Query: 542 EEITQ 556
+EI +
Sbjct: 168 DEIVK 172
Score = 83.8 bits (198), Expect = 1e-16
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = +3
Query: 39 MGKEXTHINIVVIGHVDSGKSTTTGHLIYKXGGIDKRTIXKFE 167
MGKE THINIVVIGHVDSGKSTTTGHLIYK GGIDKR I +FE
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFE 43
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +3
Query: 555 KEVSSYXKNIGYXPTAXAXXPLAGWHGDNMXE 650
KEVSSY K +GY P P++G+ GDNM E
Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIE 203
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 114 bits (275), Expect = 5e-26
Identities = 60/140 (42%), Positives = 83/140 (59%), Gaps = 7/140 (5%)
Frame = +2
Query: 170 RRPRQMGKGSFKYAWVLDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMI 349
+ ++ GKGSF YAW +D+ +R RG+T+ +A+ ET KY V ++D+PGH+DF+ NMI
Sbjct: 284 KEAKEKGKGSFAYAWAMDESSEERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMI 343
Query: 350 TGTXHADXAXLIVPAGTGEFEAGISXN-----GQTREHALLAXTLGVKQLXXXAXKXXXT 514
+G AD A L+V A TG FEAG+ GQT+EHA L + GV+QL K
Sbjct: 344 SGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAI 403
Query: 515 EPPYXXPRFE--EITQGSIL 568
Y RFE ++ GS L
Sbjct: 404 --GYSKERFEFIKVQLGSFL 421
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +3
Query: 54 THINIVVIGHVDSGKSTTTGHLIYKXGGIDKRTIXKFE 167
+ +N+ ++GHVDSGKST +G L++ G I K+ + K E
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNE 283
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 114 bits (275), Expect = 5e-26
Identities = 60/140 (42%), Positives = 83/140 (59%), Gaps = 7/140 (5%)
Frame = +2
Query: 170 RRPRQMGKGSFKYAWVLDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMI 349
+ ++ GKGSF YAW +D+ +R RG+T+ +A+ ET KY V ++D+PGH+DF+ NMI
Sbjct: 284 KEAKEKGKGSFAYAWAMDESSEERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMI 343
Query: 350 TGTXHADXAXLIVPAGTGEFEAGISXN-----GQTREHALLAXTLGVKQLXXXAXKXXXT 514
+G AD A L+V A TG FEAG+ GQT+EHA L + GV+QL K
Sbjct: 344 SGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAI 403
Query: 515 EPPYXXPRFE--EITQGSIL 568
Y RFE ++ GS L
Sbjct: 404 --GYSKERFEFIKVQLGSFL 421
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +3
Query: 54 THINIVVIGHVDSGKSTTTGHLIYKXGGIDKRTIXKFE 167
+ +N+ ++GHVDSGKST +G L++ G I K+ + K E
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNE 283
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 109 bits (262), Expect = 2e-24
Identities = 55/131 (41%), Positives = 77/131 (58%), Gaps = 6/131 (4%)
Frame = +2
Query: 176 PRQM----GKGSFKYAWVLDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXN 343
PRQ+ GKGSF YAW +D+ +R RGIT+ + + +T Y+V ++D+PGH+DF+ N
Sbjct: 269 PRQLNLAIGKGSFAYAWAMDESADERERGITMTVGVAYFDTKNYHVVLLDSPGHKDFVPN 328
Query: 344 MITGTXHADXAXLIVPAGTGEFEAGISXN--GQTREHALLAXTLGVKQLXXXAXKXXXTE 517
MI+G +D A L++ A G FEAG+ N GQT+EH+ L + GV L K E
Sbjct: 329 MISGATQSDAAILVIDASIGSFEAGMGINGIGQTKEHSQLVRSFGVDNLIVVVNKMDSVE 388
Query: 518 PPYXXPRFEEI 550
Y RF I
Sbjct: 389 --YSKERFNFI 397
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 89.8 bits (213), Expect = 2e-18
Identities = 46/131 (35%), Positives = 70/131 (53%), Gaps = 4/131 (3%)
Frame = +2
Query: 170 RRPRQMGKGSFKYAWVLDKLKADRXRGITIDIALWXXETNKYYVTIIDAP----GHRDFI 337
+ + + S+ A+++D + +R +G T+++ ET TI+DAP GH+ ++
Sbjct: 31 KEAKDKSRESWYMAYIMDTNEEERLKGKTVEVGRAHFETETTRFTILDAPVKMKGHKSYV 90
Query: 338 XNMITGTXHADXAXLIVPAGTGEFEAGISXNGQTREHALLAXTLGVKQLXXXAXKXXXTE 517
NMI+G AD L++ A GEFE G GQTREH LLA TLGV +L K
Sbjct: 91 PNMISGASQADIGVLVISARKGEFETGYEKGGQTREHVLLAKTLGVAKLIVVINKMDEPT 150
Query: 518 PPYXXPRFEEI 550
+ R++EI
Sbjct: 151 VKWSKERYDEI 161
Score = 33.5 bits (73), Expect = 0.15
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 87 DSGKSTTTGHLIYKXGGIDKRTIXKFE 167
D+GKST G +++ G +D RTI K+E
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYE 30
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 88.2 bits (209), Expect = 5e-18
Identities = 42/102 (41%), Positives = 58/102 (56%)
Frame = +2
Query: 245 RGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGTXHADXAXLIVPAGTGEFEAGIS 424
+G T+++ ET TI+DAPGH+ ++ NMI+G AD L++ A GEFE G
Sbjct: 15 KGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYE 74
Query: 425 XNGQTREHALLAXTLGVKQLXXXAXKXXXTEPPYXXPRFEEI 550
GQTREH LLA TLGV +L K + + R++EI
Sbjct: 75 RGGQTREHVLLAKTLGVSKLVVVINKMDESTVGWSKERYDEI 116
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 65.3 bits (152), Expect = 4e-11
Identities = 38/102 (37%), Positives = 49/102 (48%)
Frame = +2
Query: 218 LDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGTXHADXAXLIVPAG 397
+DK ++ RGITI A ET K + +D PGH D++ NMITG D L+V A
Sbjct: 105 IDKAPEEKARGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAP 164
Query: 398 TGEFEAGISXNGQTREHALLAXTLGVKQLXXXAXKXXXTEPP 523
G QT+EH LLA +GV L K + P
Sbjct: 165 DGPMP-------QTKEHILLARQVGVPSLVCFLNKVDAVDDP 199
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 57 HINIVVIGHVDSGKSTTT 110
H+N+ IGHVD GK+T T
Sbjct: 67 HVNVGTIGHVDHGKTTLT 84
>02_04_0462 + 23131433-23132836
Length = 467
Score = 62.9 bits (146), Expect = 2e-10
Identities = 34/89 (38%), Positives = 46/89 (51%)
Frame = +2
Query: 218 LDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGTXHADXAXLIVPAG 397
+D +R RGITI+ A ET + +D PGH D++ NMITG D A L+V
Sbjct: 108 IDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 167
Query: 398 TGEFEAGISXNGQTREHALLAXTLGVKQL 484
G QT+EH LLA +GV ++
Sbjct: 168 DGPMP-------QTKEHILLAKQVGVPKI 189
Score = 32.3 bits (70), Expect = 0.34
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 36 KMGKEXTHINIVVIGHVDSGKSTTTGHL 119
K + H+NI IGHVD GK+T T L
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAAL 90
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/79 (31%), Positives = 37/79 (46%)
Frame = +2
Query: 218 LDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGTXHADXAXLIVPAG 397
+D + +R +GITI A N Y V IID PGH DF + D A L++ +
Sbjct: 111 MDSMDLEREKGITIQSAATYCTWNGYQVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 170
Query: 398 TGEFEAGISXNGQTREHAL 454
G I+ + Q R + +
Sbjct: 171 GGVQSQSITVDRQMRRYEI 189
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 63 NIVVIGHVDSGKSTTTGHLIYKXGGI 140
NI + H+DSGK+T T ++Y G I
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRI 95
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = +2
Query: 179 RQMGKGSFKYAWVLDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGT 358
RQ G + +D + +R RGITI + + + ++D PGH DF +
Sbjct: 86 RQCG-ADIPHERAMDSISLERERGITIASKVTSVSWKENELNMVDTPGHADFGGEVERVV 144
Query: 359 XHADXAXLIVPAGTG 403
+ A L+V AG G
Sbjct: 145 GMVEGAVLVVDAGEG 159
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 9 AVCNPCTIPKMGKEXTHI-NIVVIGHVDSGKSTTTGHLIYKXG 134
A +P P + + I N+ VI HVD GK+T L+ + G
Sbjct: 47 AAASPALGPGGALDPSRIRNVAVIAHVDHGKTTLMDRLLRQCG 89
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 37.1 bits (82), Expect = 0.012
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = +2
Query: 218 LDKLKADRXRGITIDIAL----WXXETNKYYVTIIDAPGHRDFIXNMITGTXHADXAXLI 385
LD + +R RGITI + + Y + +ID PGH DF + + A L+
Sbjct: 114 LDNMDLERERGITIKLQAARMRYIMNDEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLV 173
Query: 386 VPAGTG 403
V A G
Sbjct: 174 VDASQG 179
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 63 NIVVIGHVDSGKSTTTGHLIYKXGGIDKR 149
N +I H+D GKST L+ G + KR
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKR 107
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 35.9 bits (79), Expect = 0.028
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +2
Query: 218 LDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGTXHADXAXLIVPAG 397
+D L ++ R IT+ A + V +ID+PGH DF + + +D A ++V A
Sbjct: 50 MDYLDEEQRRAITMKSAAVVLHHGGHRVNLIDSPGHIDFCSEVSSAARLSDSALILVDAV 109
Query: 398 TG 403
G
Sbjct: 110 EG 111
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 63 NIVVIGHVDSGKSTTTGHLIYKXG 134
N ++ HVD GK+T HL+ G
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG 35
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 35.1 bits (77), Expect = 0.049
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 194 GSFKYAWV-LDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDF 334
G F+ V +D ++ ++ RGITI NK+ + IID PGH DF
Sbjct: 135 GEFQEGTVTMDWMEQEQERGITITSPPTTAFWNKHRINIIDTPGHVDF 182
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +3
Query: 57 HINIVVIGHVDSGKSTTTGHLIYKXG 134
HI+ V++ H+D+GK+TTT ++Y G
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTG 129
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 34.7 bits (76), Expect = 0.065
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Frame = +2
Query: 209 AWVLDKLKADRXRGITI---DIAL--WXXETNKYYVTIIDAPGHRDFIXNMITGTXHADX 373
A V+D L+ ++ R IT+ IAL + + V +ID+PGH DF + AD
Sbjct: 54 ARVMDHLEEEQRRAITMKSASIALRRGGEDGGGHRVHLIDSPGHIDFCSEVSAAARLADS 113
Query: 374 AXLIVPAGTG 403
A ++V A G
Sbjct: 114 ALVLVDAAEG 123
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 31.1 bits (67), Expect = 0.80
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 15/77 (19%)
Frame = +2
Query: 218 LDKLKADRXRGITIDI---ALWXXETNK------------YYVTIIDAPGHRDFIXNMIT 352
LDKL+ +R RGIT+ ++ N Y + +ID PGH DF +
Sbjct: 94 LDKLQVERERGITVKAQTATMFYRHANNQLPASDQPDAPSYLLNLIDTPGHVDFSYEVSR 153
Query: 353 GTXHADXAXLIVPAGTG 403
A L+V A G
Sbjct: 154 SLAACQGALLVVDAAQG 170
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 63 NIVVIGHVDSGKSTTTGHLIYKXGGIDK 146
N +I HVD GKST L+ G I K
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK 86
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 31.1 bits (67), Expect = 0.80
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 287 NKYYVTIIDAPGHRDFIXNMITGTXHADXAXLIV 388
N+Y + +ID+PGH DF + D A ++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 39 MGKEXTHINIVVIGHVDSGKSTTTGHLIYKXG 134
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 31.1 bits (67), Expect = 0.80
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 287 NKYYVTIIDAPGHRDFIXNMITGTXHADXAXLIV 388
N+Y + +ID+PGH DF + D A ++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 39 MGKEXTHINIVVIGHVDSGKSTTTGHLIYKXG 134
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 31.1 bits (67), Expect = 0.80
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 287 NKYYVTIIDAPGHRDFIXNMITGTXHADXAXLIV 388
N+Y + +ID+PGH DF + D A ++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 39 MGKEXTHINIVVIGHVDSGKSTTTGHLIYKXG 134
M K+ N+ V+ HVD GKST T L+ G
Sbjct: 13 MDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAG 44
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 287 NKYYVTIIDAPGHRDFIXNMITGTXHADXAXLIV 388
N Y + +ID+PGH DF + D A ++V
Sbjct: 96 NSYLINLIDSPGHIDFSSEVTAALRITDGALVVV 129
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 39 MGKEXTHINIVVIGHVDSGKSTTTGHLIYKXG 134
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 215 VLDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDF 334
++D +R RGITI + IID PGH DF
Sbjct: 156 IMDSNDLERERGITILSKNTSITYKGTKINIIDTPGHSDF 195
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 296 YVTIIDAPGHRDFIXNMITGTXHADXAXLIVPA 394
+V+ +D PGH + M+ G D A L++ A
Sbjct: 149 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 181
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 27.5 bits (58), Expect = 9.8
Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Frame = +2
Query: 188 GKGSFKYAWVLDKLKADRXRGITIDIALWXXET-NKYYVTIIDAPGHRDFIXNMITGTXH 364
GK S + + A GIT I + E + +T +D PGH F G
Sbjct: 209 GKTSLLDSLRQTSVAAKEAGGITQHIGAFVVEMPSGASITFLDTPGHAAFSAMRARGAAV 268
Query: 365 ADXAXLIVPAGTG 403
D L+V A G
Sbjct: 269 TDIVVLVVAADDG 281
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,530,316
Number of Sequences: 37544
Number of extensions: 245095
Number of successful extensions: 464
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -