Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2090
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 198 4e-51
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 198 4e-51
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 179 1e-45
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 124 6e-30
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 126 1e-29
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 126 1e-29
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 108 4e-24
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 85 4e-17
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 66 2e-11
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 66 2e-11
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 61 6e-10
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 61 6e-10
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 61 6e-10
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 36 0.019
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 35 0.058
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 34 0.10
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 31 0.71
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 31 0.71
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 0.94
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 0.94
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 2.9
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 29 3.8
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 29 3.8
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 28 6.6
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 198 bits (482), Expect = 4e-51
Identities = 94/128 (73%), Positives = 101/128 (78%)
Frame = +2
Query: 170 RRPRQMGKGSFKYAWVLDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMI 349
+ ++MGKGSFKYAWVLDKLKA+R RGITIDIALW ET KYY+TIIDAPGHRDFI NMI
Sbjct: 44 KEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMI 103
Query: 350 TGTXHADXAXLIVPAGTGEFEAGISXNGQTREHALLAXTLGVKQLXXXAXKXXXTEPPYX 529
TGT AD A L+V GTGEFEAGIS NGQTREHALLA TLGVKQL K TEPP+
Sbjct: 104 TGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFS 163
Query: 530 XPRFEEIT 553
RF EIT
Sbjct: 164 EARFTEIT 171
Score = 85.0 bits (201), Expect = 4e-17
Identities = 39/43 (90%), Positives = 39/43 (90%)
Frame = +3
Query: 39 MGKEXTHINIVVIGHVDSGKSTTTGHLIYKXGGIDKRTIXKFE 167
MGKE HINIVVIGHVDSGKSTTTGHLIYK GGIDKRTI KFE
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFE 43
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +3
Query: 558 EVSSYXKNIGYXPTAXAXXPLAGWHGDNMXE 650
EVS + K IGY P A P++G++GDNM E
Sbjct: 173 EVSGFIKKIGYNPKAVPFVPISGFNGDNMLE 203
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 198 bits (482), Expect = 4e-51
Identities = 94/128 (73%), Positives = 101/128 (78%)
Frame = +2
Query: 170 RRPRQMGKGSFKYAWVLDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMI 349
+ ++MGKGSFKYAWVLDKLKA+R RGITIDIALW ET KYY+TIIDAPGHRDFI NMI
Sbjct: 44 KEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMI 103
Query: 350 TGTXHADXAXLIVPAGTGEFEAGISXNGQTREHALLAXTLGVKQLXXXAXKXXXTEPPYX 529
TGT AD A L+V GTGEFEAGIS NGQTREHALLA TLGVKQL K TEPP+
Sbjct: 104 TGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFS 163
Query: 530 XPRFEEIT 553
RF EIT
Sbjct: 164 EARFTEIT 171
Score = 85.0 bits (201), Expect = 4e-17
Identities = 39/43 (90%), Positives = 39/43 (90%)
Frame = +3
Query: 39 MGKEXTHINIVVIGHVDSGKSTTTGHLIYKXGGIDKRTIXKFE 167
MGKE HINIVVIGHVDSGKSTTTGHLIYK GGIDKRTI KFE
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFE 43
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +3
Query: 558 EVSSYXKNIGYXPTAXAXXPLAGWHGDNMXE 650
EVS + K IGY P A P++G++GDNM E
Sbjct: 173 EVSGFIKKIGYNPKAVPFVPISGFNGDNMLE 203
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 179 bits (436), Expect = 1e-45
Identities = 84/105 (80%), Positives = 90/105 (85%)
Frame = +2
Query: 170 RRPRQMGKGSFKYAWVLDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMI 349
+ ++MGKGSFKYAWVLDKLKA+R RGITIDIALW ET KYY+TIIDAPGHRDFI NMI
Sbjct: 44 KEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMI 103
Query: 350 TGTXHADXAXLIVPAGTGEFEAGISXNGQTREHALLAXTLGVKQL 484
TGT AD A L+V GTGEFEAGIS NGQTREHALLA TLGVKQL
Sbjct: 104 TGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQL 148
Score = 85.0 bits (201), Expect = 4e-17
Identities = 39/43 (90%), Positives = 39/43 (90%)
Frame = +3
Query: 39 MGKEXTHINIVVIGHVDSGKSTTTGHLIYKXGGIDKRTIXKFE 167
MGKE HINIVVIGHVDSGKSTTTGHLIYK GGIDKRTI KFE
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFE 43
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 124 bits (299), Expect(2) = 6e-30
Identities = 56/73 (76%), Positives = 62/73 (84%)
Frame = +2
Query: 170 RRPRQMGKGSFKYAWVLDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMI 349
+ ++MGKGSFKYAWVLDKLKA+R RGITIDIALW ET KYY+TIIDAPGHRDFI NMI
Sbjct: 44 KEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMI 103
Query: 350 TGTXHADXAXLIV 388
TGT AD A L+V
Sbjct: 104 TGTSQADCAVLVV 116
Score = 85.0 bits (201), Expect = 4e-17
Identities = 39/43 (90%), Positives = 39/43 (90%)
Frame = +3
Query: 39 MGKEXTHINIVVIGHVDSGKSTTTGHLIYKXGGIDKRTIXKFE 167
MGKE HINIVVIGHVDSGKSTTTGHLIYK GGIDKRTI KFE
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFE 43
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +3
Query: 558 EVSSYXKNIGYXPTAXAXXPLAGWHGDNMXE 650
EVS + K IGY P A P++G++GDNM E
Sbjct: 139 EVSGFIKKIGYNPKAVPFVPISGFNGDNMLE 169
Score = 24.2 bits (50), Expect(2) = 6e-30
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 500 KXXXTEPPYXXPRFEEIT 553
K TEPP+ RF EIT
Sbjct: 120 KMDSTEPPFSEARFTEIT 137
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 126 bits (304), Expect = 1e-29
Identities = 62/121 (51%), Positives = 78/121 (64%)
Frame = +2
Query: 188 GKGSFKYAWVLDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGTXHA 367
GK SF YAWVLD+ + +R RG+T+DI ET+ + ++DAPGH+DFI NMITGT A
Sbjct: 213 GKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQA 272
Query: 368 DXAXLIVPAGTGEFEAGISXNGQTREHALLAXTLGVKQLXXXAXKXXXTEPPYXXPRFEE 547
D A L+V A TGEFE G GQT+EHALL +LGV QL K + + RF+E
Sbjct: 273 DAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDE 330
Query: 548 I 550
I
Sbjct: 331 I 331
Score = 50.0 bits (114), Expect = 1e-06
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = +3
Query: 60 INIVVIGHVDSGKSTTTGHLIYKXGGIDKRTIXKFE 167
IN++V+GHVD+GKST GHL++ +D RTI KF+
Sbjct: 171 INLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFK 206
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 126 bits (304), Expect = 1e-29
Identities = 62/121 (51%), Positives = 78/121 (64%)
Frame = +2
Query: 188 GKGSFKYAWVLDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGTXHA 367
GK SF YAWVLD+ + +R RG+T+DI ET+ + ++DAPGH+DFI NMITGT A
Sbjct: 231 GKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQA 290
Query: 368 DXAXLIVPAGTGEFEAGISXNGQTREHALLAXTLGVKQLXXXAXKXXXTEPPYXXPRFEE 547
D A L+V A TGEFE G GQT+EHALL +LGV QL K + + RF+E
Sbjct: 291 DAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDE 348
Query: 548 I 550
I
Sbjct: 349 I 349
Score = 50.0 bits (114), Expect = 1e-06
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = +3
Query: 60 INIVVIGHVDSGKSTTTGHLIYKXGGIDKRTIXKFE 167
IN++V+GHVD+GKST GHL++ +D RTI KF+
Sbjct: 189 INLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFK 224
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 108 bits (259), Expect = 4e-24
Identities = 54/151 (35%), Positives = 76/151 (50%)
Frame = +2
Query: 170 RRPRQMGKGSFKYAWVLDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMI 349
R ++ G+ S+ +W +D +R +G T+++ ET K + TI+DAPGH+ F+ NMI
Sbjct: 146 REAKEKGRESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMI 205
Query: 350 TGTXHADXAXLIVPAGTGEFEAGISXNGQTREHALLAXTLGVKQLXXXAXKXXXTEPPYX 529
G AD A L++ A GEFE G GQTREH++L T GVK L K +
Sbjct: 206 VGANQADLAVLVISARRGEFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWE 265
Query: 530 XPRFEEITQGSILIXQKHWLXPNCXRFXAPC 622
RF+EI +K P PC
Sbjct: 266 EERFKEIEGKLTPFLRKLGFNPKTDITYVPC 296
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/42 (52%), Positives = 30/42 (71%)
Frame = +3
Query: 42 GKEXTHINIVVIGHVDSGKSTTTGHLIYKXGGIDKRTIXKFE 167
G HIN+V +GHVD+GKST G L++ G +DKRT+ K+E
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYE 145
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 85.0 bits (201), Expect = 4e-17
Identities = 39/43 (90%), Positives = 39/43 (90%)
Frame = +3
Query: 39 MGKEXTHINIVVIGHVDSGKSTTTGHLIYKXGGIDKRTIXKFE 167
MGKE HINIVVIGHVDSGKSTTTGHLIYK GGIDKRTI KFE
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFE 43
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +2
Query: 170 RRPRQMGKGSFKYAWVLDKLKADR 241
+ ++MGKGSFKYAWVLDKLK +
Sbjct: 44 KEAQEMGKGSFKYAWVLDKLKVTK 67
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 66.1 bits (154), Expect = 2e-11
Identities = 39/100 (39%), Positives = 52/100 (52%)
Frame = +2
Query: 218 LDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGTXHADXAXLIVPAG 397
+DK K ++ RGITI++A E+ + D PGH DFI NMI GT D A L++ A
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 398 TGEFEAGISXNGQTREHALLAXTLGVKQLXXXAXKXXXTE 517
G E QT+EH +LA +GVK + K E
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE 175
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 66.1 bits (154), Expect = 2e-11
Identities = 39/100 (39%), Positives = 52/100 (52%)
Frame = +2
Query: 218 LDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGTXHADXAXLIVPAG 397
+DK K ++ RGITI++A E+ + D PGH DFI NMI GT D A L++ A
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 398 TGEFEAGISXNGQTREHALLAXTLGVKQLXXXAXKXXXTE 517
G E QT+EH +LA +GVK + K E
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE 175
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 61.3 bits (142), Expect = 6e-10
Identities = 36/86 (41%), Positives = 45/86 (52%)
Frame = +2
Query: 218 LDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGTXHADXAXLIVPAG 397
+D ++ RGITI+ ET K + ID PGH D+I NMITG + A L+V A
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 398 TGEFEAGISXNGQTREHALLAXTLGV 475
G QTREH LLA +GV
Sbjct: 147 DGPMP-------QTREHLLLARQVGV 165
Score = 30.7 bits (66), Expect = 0.94
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 45 KEXTHINIVVIGHVDSGKSTTT 110
++ H+N+ IGHVD GK+T T
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLT 66
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 61.3 bits (142), Expect = 6e-10
Identities = 36/86 (41%), Positives = 45/86 (52%)
Frame = +2
Query: 218 LDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGTXHADXAXLIVPAG 397
+D ++ RGITI+ ET K + ID PGH D+I NMITG + A L+V A
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 398 TGEFEAGISXNGQTREHALLAXTLGV 475
G QTREH LLA +GV
Sbjct: 148 DGPMP-------QTREHLLLARQVGV 166
Score = 30.7 bits (66), Expect = 0.94
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 45 KEXTHINIVVIGHVDSGKSTTT 110
++ H+N+ IGHVD GK+T T
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLT 67
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 61.3 bits (142), Expect = 6e-10
Identities = 36/86 (41%), Positives = 45/86 (52%)
Frame = +2
Query: 218 LDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGTXHADXAXLIVPAG 397
+D ++ RGITI+ ET K + ID PGH D+I NMITG + A L+V A
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 398 TGEFEAGISXNGQTREHALLAXTLGV 475
G QTREH LLA +GV
Sbjct: 148 DGPMP-------QTREHLLLARQVGV 166
Score = 30.7 bits (66), Expect = 0.94
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 45 KEXTHINIVVIGHVDSGKSTTT 110
++ H+N+ IGHVD GK+T T
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLT 67
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = +2
Query: 215 VLDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGTXHADXAXLIVPA 394
+LDKL+ +R RGIT+ Y + +ID PGH DF + D L+V A
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 395 GTG 403
G
Sbjct: 136 NQG 138
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 36.3 bits (80), Expect = 0.019
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = +2
Query: 218 LDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGTXHADXAXLIVPAG 397
+D + +R RGITI A + + + IID PGH DF + D A L++ G
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CG 145
Query: 398 TG 403
G
Sbjct: 146 VG 147
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 63 NIVVIGHVDSGKSTTTGHLIYKXGGID 143
NI + H+DSGK+T T ++Y G ID
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 34.7 bits (76), Expect = 0.058
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 215 VLDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDF 334
V D L +R RGIT+ A + + + +ID PGH DF
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDF 103
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3
Query: 63 NIVVIGHVDSGKSTTTGHLIYKXGGI 140
NI VI HVD+GK+T T L+Y G I
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 33.9 bits (74), Expect = 0.10
Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +2
Query: 188 GKGSFKYAWVLDKLKADRXRGITIDIALWXXETNK-YYVTIIDAPGHRDFIXNMITGTXH 364
GK + A ++ A GIT I + E K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 365 ADXAXLIVPAGTG 403
AD L+V A G
Sbjct: 228 ADIVVLVVAADDG 240
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +2
Query: 218 LDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGTXHADXAXLIV 388
+D + ++ RGIT+ + + +ID+PGH DF + + +D A L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +2
Query: 218 LDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGTXHADXAXLIV 388
+D + ++ RGIT+ + + +ID+PGH DF + + +D A L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 31.1 bits (67), Expect = 0.71
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 63 NIVVIGHVDSGKSTTTGHLIYKXG 134
N+ VI HVD GKST T L+ K G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 254 TIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGTXHADXAXLIVPAGTG 403
T+++ + N + + +ID+PGH DF + D A ++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 31.1 bits (67), Expect = 0.71
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 63 NIVVIGHVDSGKSTTTGHLIYKXG 134
N+ VI HVD GKST T L+ K G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 254 TIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGTXHADXAXLIVPAGTG 403
T+++ + N + + +ID+PGH DF + D A ++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.7 bits (66), Expect = 0.94
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +2
Query: 218 LDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGTXHADXAXLIVPAG 397
++K + + + I + Y + IID PGH +F M AD ++V A
Sbjct: 176 IEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAH 235
Query: 398 TG 403
G
Sbjct: 236 EG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.7 bits (66), Expect = 0.94
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +2
Query: 218 LDKLKADRXRGITIDIALWXXETNKYYVTIIDAPGHRDFIXNMITGTXHADXAXLIVPAG 397
++K + + + I + Y + IID PGH +F M AD ++V A
Sbjct: 51 IEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAH 110
Query: 398 TG 403
G
Sbjct: 111 EG 112
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 33 PKMGKEXTHINIVVIGHVDSGKSTTT 110
P +N+ ++GHVDSGK+T T
Sbjct: 5 PSTSSSVGPLNLGILGHVDSGKTTLT 30
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +2
Query: 299 VTIIDAPGHRDFIXNMITGTXHADXAXLIVPAGTGEFEAGISXNGQTREHALLA 460
+ +ID PGH I ++ + D A +I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLA 120
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 33 PKMGKEXTHINIVVIGHVDSGKSTTT 110
P +N+ ++GHVDSGK+T T
Sbjct: 5 PSTSSSVGPLNLGILGHVDSGKTTLT 30
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 33 PKMGKEXTHINIVVIGHVDSGKSTTTGHLIY 125
P K+ + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 33 PKMGKEXTHINIVVIGHVDSGKSTTTGHLIY 125
P K+ + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +3
Query: 18 NPCTIPKMGKEXTHINIVVIGHVDSGKST 104
NP T + ++ T INI IGHV GKST
Sbjct: 28 NPLTEEVISRQAT-INIGTIGHVAHGKST 55
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 296 YVTIIDAPGHRDFIXNMITGTXHADXAXLIV 388
+V+ +D PGH + M+ G D A L+V
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLV 158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,926,018
Number of Sequences: 27780
Number of extensions: 202253
Number of successful extensions: 391
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 386
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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