Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2089
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical pr... 214 4e-56
U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical pr... 214 4e-56
AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical... 189 1e-48
U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical pr... 120 1e-27
U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical pr... 88 7e-18
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 38 0.009
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 38 0.009
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 38 0.009
AL031630-12|CAA20991.1| 375|Caenorhabditis elegans Hypothetical... 28 7.4
Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical p... 27 9.8
AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical ... 27 9.8
>U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical
protein C14F11.1b protein.
Length = 297
Score = 214 bits (523), Expect = 4e-56
Identities = 100/172 (58%), Positives = 130/172 (75%)
Frame = +1
Query: 184 TWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSR 363
+WW++V+MGPPD ILG+TEA+K D++PKK+NLGVGAYRDD+GKPFVLPSV++AE + +
Sbjct: 16 SWWSHVEMGPPDAILGVTEAFKADSNPKKINLGVGAYRDDQGKPFVLPSVKEAERQVIAA 75
Query: 364 GLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFITKHYA 543
L+ EYA I G +T A+LA GE+S VIKN+ T Q++SGTGALR+G EF++K YA
Sbjct: 76 NLDKEYAGIVGLPEFTKLSAQLALGENSDVIKNKRIFTTQSISGTGALRIGSEFLSK-YA 134
Query: 544 KAKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLXGALEDISKIP 699
K K I+ PTPTWGNH I + K+YRY+D T GFD GAL DI++IP
Sbjct: 135 KTKVIYQPTPTWGNHVPIFKFAGVDVKQYRYYDKSTCGFDETGALADIAQIP 186
>U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical
protein C14F11.1a protein.
Length = 414
Score = 214 bits (523), Expect = 4e-56
Identities = 100/172 (58%), Positives = 130/172 (75%)
Frame = +1
Query: 184 TWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSR 363
+WW++V+MGPPD ILG+TEA+K D++PKK+NLGVGAYRDD+GKPFVLPSV++AE + +
Sbjct: 16 SWWSHVEMGPPDAILGVTEAFKADSNPKKINLGVGAYRDDQGKPFVLPSVKEAERQVIAA 75
Query: 364 GLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFITKHYA 543
L+ EYA I G +T A+LA GE+S VIKN+ T Q++SGTGALR+G EF++K YA
Sbjct: 76 NLDKEYAGIVGLPEFTKLSAQLALGENSDVIKNKRIFTTQSISGTGALRIGSEFLSK-YA 134
Query: 544 KAKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLXGALEDISKIP 699
K K I+ PTPTWGNH I + K+YRY+D T GFD GAL DI++IP
Sbjct: 135 KTKVIYQPTPTWGNHVPIFKFAGVDVKQYRYYDKSTCGFDETGALADIAQIP 186
>AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical
protein C44E4.3 protein.
Length = 419
Score = 189 bits (461), Expect = 1e-48
Identities = 87/171 (50%), Positives = 123/171 (71%)
Frame = +1
Query: 187 WWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSRG 366
W+ NV + P D ILG+TEA+KKDT+P K+NLGVGAYRDD+GKPFVL +VR+AE+ +
Sbjct: 22 WFRNVPLAPADPILGVTEAFKKDTNPNKINLGVGAYRDDQGKPFVLRAVREAEQQIIDAK 81
Query: 367 LNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFITKHYAK 546
++ EY+ I+G + AKLAFG++S VI++ T Q++SGTGALR+G +F+ K +
Sbjct: 82 MDKEYSTITGVPEFAPLAAKLAFGDNSEVIRDGRVFTTQSISGTGALRIGGQFVEK-FIP 140
Query: 547 AKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLXGALEDISKIP 699
+K ++ PTPTW NH + L + YRY++ +T GFD+ GALEDISK+P
Sbjct: 141 SKTLFYPTPTWANHLPVFRNSGLSIQPYRYYNQETLGFDVEGALEDISKMP 191
>U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical
protein T01C8.5 protein.
Length = 408
Score = 120 bits (289), Expect = 1e-27
Identities = 62/174 (35%), Positives = 91/174 (52%), Gaps = 2/174 (1%)
Frame = +1
Query: 184 TWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAE-EILHS 360
++++ + + PP + + Y +T P KVNL +GAYR +EG+P+VLP V + E EI +
Sbjct: 2 SFFDGIPVAPPIEVFHKNKMYLDETAPVKVNLTIGAYRTEEGQPWVLPVVHETEVEIAND 61
Query: 361 RGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFITKHY 540
LNHEY P+ G + A +L G +SP IK + VQ LSGTGALR G EF+
Sbjct: 62 TSLNHEYLPVLGHEGFRKAATELVLGAESPAIKEERSFGVQCLSGTGALRAGAEFLAS-V 120
Query: 541 AKAKEIWLPTPTWGNHPQICNTLNLPH-KKYRYFDPKTNGFDLXGALEDISKIP 699
K +++ PTWGNH + Y ++D + L D+ P
Sbjct: 121 CNMKTVYVSNPTWGNHKLVFKKAGFTTVADYTFWDYDNKRVHIEKFLSDLESAP 174
>U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical
protein T01C8.4 protein.
Length = 357
Score = 87.8 bits (208), Expect = 7e-18
Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 1/131 (0%)
Frame = +1
Query: 184 TWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAE-EILHS 360
++++ + + P L +E ++K+ P K+NL + AYR ++G+P+VLP VR+ E + H
Sbjct: 4 SFFDGIHVASPIKELHTSELFQKEICPVKINLAIEAYRTEDGEPWVLPVVREIELKFPHE 63
Query: 361 RGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFITKHY 540
NHEY PI G + + L G DS IK + +VQ +SGTGA+ +G EF+ +
Sbjct: 64 PHHNHEYLPILGHDGFCKSATALLLGNDSLAIKEGRSFSVQCISGTGAICVGAEFLAQ-V 122
Query: 541 AKAKEIWLPTP 573
K I++ P
Sbjct: 123 LSMKTIYVSNP 133
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/79 (31%), Positives = 43/79 (54%)
Frame = -3
Query: 524 NSSPSRSAPVPDNVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYSWLSPLL*RIS 345
+S + S+P+P ++ T L + + SSP A+ +T V ++S + + S P ++
Sbjct: 27 SSLGTSSSPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPS--SVA 84
Query: 344 SAFLTEGKTNGFPSSSLYA 288
S+ T G T+G SSS YA
Sbjct: 85 SSPSTVGSTSGAASSSSYA 103
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/79 (31%), Positives = 43/79 (54%)
Frame = -3
Query: 524 NSSPSRSAPVPDNVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYSWLSPLL*RIS 345
+S + S+P+P ++ T L + + SSP A+ +T V ++S + + S P ++
Sbjct: 234 SSLGTSSSPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPS--SVA 291
Query: 344 SAFLTEGKTNGFPSSSLYA 288
S+ T G T+G SSS YA
Sbjct: 292 SSPSTVGSTSGAASSSSYA 310
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/79 (31%), Positives = 43/79 (54%)
Frame = -3
Query: 524 NSSPSRSAPVPDNVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYSWLSPLL*RIS 345
+S + S+P+P ++ T L + + SSP A+ +T V ++S + + S P ++
Sbjct: 234 SSLGTSSSPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPS--SVA 291
Query: 344 SAFLTEGKTNGFPSSSLYA 288
S+ T G T+G SSS YA
Sbjct: 292 SSPSTVGSTSGAASSSSYA 310
>AL031630-12|CAA20991.1| 375|Caenorhabditis elegans Hypothetical
protein Y38H6C.13 protein.
Length = 375
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 147 HDRWLYRPXSQQHLVEQCSDGSARCNLRHYRS 242
H +W S Q+L CS G A L+HY++
Sbjct: 255 HLKWTTPFISDQYLFRGCSPGFAWSQLKHYKA 286
>Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.12 protein.
Length = 228
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 479 TVQLLLFLMTGLSSPKASLATASVYVASPLMGAY 378
++Q L+FL + L +L++A V V P MG Y
Sbjct: 3 SLQYLIFLFSSLLFAGLALSSAQVAVNGPFMGRY 36
>AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical
protein Y37E11AM.1 protein.
Length = 1037
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 229 GITEAYKKDTHPKKVNLGVGAYRDDEG 309
GI A +++ HP KV G+G + D G
Sbjct: 910 GIEVAVRRNVHPPKVLTGIGIHSPDGG 936
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,967,628
Number of Sequences: 27780
Number of extensions: 375015
Number of successful extensions: 1040
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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