Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2088
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 157 5e-39
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 157 5e-39
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 144 6e-35
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 144 6e-35
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 116 2e-26
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 116 2e-26
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 116 2e-26
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 93 1e-19
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 93 1e-19
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 79 3e-15
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 79 3e-15
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 79 3e-15
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 65 5e-11
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 65 5e-11
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 62 4e-10
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 62 4e-10
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 60 2e-09
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 59 2e-09
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 59 2e-09
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 59 2e-09
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 59 2e-09
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 59 2e-09
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 59 2e-09
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 59 2e-09
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 58 5e-09
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 58 5e-09
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 58 7e-09
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 58 7e-09
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 56 2e-08
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 56 2e-08
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 56 2e-08
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 56 3e-08
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 56 3e-08
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 56 3e-08
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 55 4e-08
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 54 1e-07
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 51 6e-07
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 51 6e-07
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 51 6e-07
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 51 6e-07
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 51 6e-07
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 51 6e-07
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 51 8e-07
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 50 2e-06
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 50 2e-06
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 50 2e-06
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 49 3e-06
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 49 3e-06
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 49 3e-06
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 48 8e-06
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 46 2e-05
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 46 2e-05
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 46 2e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 45 4e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 45 5e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 45 5e-05
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 44 7e-05
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 44 7e-05
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 44 7e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 43 2e-04
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 43 2e-04
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 42 3e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 42 5e-04
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 42 5e-04
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 42 5e-04
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 41 7e-04
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 41 7e-04
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 41 9e-04
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 40 0.002
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 39 0.003
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 39 0.003
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 39 0.003
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 39 0.003
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 39 0.004
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 38 0.005
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 37 0.011
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 37 0.011
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 37 0.014
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 36 0.033
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 35 0.044
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 35 0.044
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 35 0.044
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 35 0.044
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 35 0.044
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 35 0.044
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 35 0.058
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 35 0.058
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 35 0.058
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 35 0.058
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 35 0.058
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 34 0.10
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 34 0.10
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 33 0.18
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical p... 32 0.31
L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical pr... 32 0.41
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 31 0.54
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 31 0.54
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 31 0.54
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 31 0.71
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 31 0.71
Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 29 2.9
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 29 3.8
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 28 5.0
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 28 5.0
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 28 5.0
Z69634-9|CAO82013.1| 575|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z69634-8|CAA93452.4| 591|Caenorhabditis elegans Hypothetical pr... 28 6.6
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 28 6.6
L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF099920-4|AAK29844.2| 363|Caenorhabditis elegans Serpentine re... 27 8.7
AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical ... 27 8.7
AC024746-7|AAF60403.1| 246|Caenorhabditis elegans Hypothetical ... 27 8.7
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 157 bits (382), Expect = 5e-39
Identities = 80/190 (42%), Positives = 113/190 (59%), Gaps = 1/190 (0%)
Frame = +2
Query: 62 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI 241
TDN++NGNA ++ N G ++D+K+FVGG+S E +++L HF YGE+
Sbjct: 4 TDNKINGNAS----ETIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQA 58
Query: 242 NVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-KIFVGGLS 418
VK D GRSRGFAF+ F E +AA E TI K V+ K AK+R K+FVGGL
Sbjct: 59 QVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLP 118
Query: 419 SEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGK 598
S+ S+ ++R+ F +FG + +E PFDK R+ F FI FE E+ + K+T G +
Sbjct: 119 SDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTR 178
Query: 599 EVDVKRATPK 628
E DVK+A P+
Sbjct: 179 ECDVKKAVPQ 188
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 157 bits (382), Expect = 5e-39
Identities = 80/190 (42%), Positives = 113/190 (59%), Gaps = 1/190 (0%)
Frame = +2
Query: 62 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI 241
TDN++NGNA ++ N G ++D+K+FVGG+S E +++L HF YGE+
Sbjct: 4 TDNKINGNAS----ETIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQA 58
Query: 242 NVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-KIFVGGLS 418
VK D GRSRGFAF+ F E +AA E TI K V+ K AK+R K+FVGGL
Sbjct: 59 QVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLP 118
Query: 419 SEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGK 598
S+ S+ ++R+ F +FG + +E PFDK R+ F FI FE E+ + K+T G +
Sbjct: 119 SDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTR 178
Query: 599 EVDVKRATPK 628
E DVK+A P+
Sbjct: 179 ECDVKKAVPQ 188
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 144 bits (348), Expect = 6e-35
Identities = 68/173 (39%), Positives = 105/173 (60%), Gaps = 9/173 (5%)
Frame = +2
Query: 137 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 316
G D K+F+GGLSW+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 99
Query: 317 DKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEISDDEIRNFFSEFGT 469
DKV+ EH ++ KK+DPK K + K+F+GGLS+ + ++++ +F +G
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGK 159
Query: 470 IL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 628
+ + FDK + +GF F+TF+S++V + + + I GK V+ K+A PK
Sbjct: 160 VEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 57.6 bits (133), Expect = 7e-09
Identities = 30/97 (30%), Positives = 49/97 (50%)
Frame = +2
Query: 338 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRK 517
E +N D GK+F+GGLS + + + +R++F FG + + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 518 GFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 628
GF FITF V+ +L + + GK++D K A PK
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 144 bits (348), Expect = 6e-35
Identities = 68/173 (39%), Positives = 105/173 (60%), Gaps = 9/173 (5%)
Frame = +2
Query: 137 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 316
G D K+F+GGLSW+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 99
Query: 317 DKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEISDDEIRNFFSEFGT 469
DKV+ EH ++ KK+DPK K + K+F+GGLS+ + ++++ +F +G
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGK 159
Query: 470 IL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 628
+ + FDK + +GF F+TF+S++V + + + I GK V+ K+A PK
Sbjct: 160 VEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 57.6 bits (133), Expect = 7e-09
Identities = 30/97 (30%), Positives = 49/97 (50%)
Frame = +2
Query: 338 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRK 517
E +N D GK+F+GGLS + + + +R++F FG + + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 518 GFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 628
GF FITF V+ +L + + GK++D K A PK
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 116 bits (278), Expect = 2e-26
Identities = 65/194 (33%), Positives = 101/194 (52%), Gaps = 11/194 (5%)
Frame = +2
Query: 86 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 265
AENG GD+ S E ++ RK+FVGGL+ TTD +R+ + +GEI I V DP T
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60
Query: 266 GRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-----------IFVGG 412
RSRGF F+ F +D M H I+ K VDPK+A R K ++V G
Sbjct: 61 KRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSG 120
Query: 413 LSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIG 592
+ + ++D + +F+++GT+ E+ DK + +GF F+TF+ V+ + +
Sbjct: 121 VREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVN 180
Query: 593 GKEVDVKRATPKPD 634
G DV++ K +
Sbjct: 181 GHRCDVRKGLSKDE 194
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 116 bits (278), Expect = 2e-26
Identities = 65/194 (33%), Positives = 101/194 (52%), Gaps = 11/194 (5%)
Frame = +2
Query: 86 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 265
AENG GD+ S E ++ RK+FVGGL+ TTD +R+ + +GEI I V DP T
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60
Query: 266 GRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-----------IFVGG 412
RSRGF F+ F +D M H I+ K VDPK+A R K ++V G
Sbjct: 61 KRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSG 120
Query: 413 LSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIG 592
+ + ++D + +F+++GT+ E+ DK + +GF F+TF+ V+ + +
Sbjct: 121 VREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVN 180
Query: 593 GKEVDVKRATPKPD 634
G DV++ K +
Sbjct: 181 GHRCDVRKGLSKDE 194
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 116 bits (278), Expect = 2e-26
Identities = 65/194 (33%), Positives = 101/194 (52%), Gaps = 11/194 (5%)
Frame = +2
Query: 86 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 265
AENG GD+ S E ++ RK+FVGGL+ TTD +R+ + +GEI I V DP T
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60
Query: 266 GRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-----------IFVGG 412
RSRGF F+ F +D M H I+ K VDPK+A R K ++V G
Sbjct: 61 KRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSG 120
Query: 413 LSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIG 592
+ + ++D + +F+++GT+ E+ DK + +GF F+TF+ V+ + +
Sbjct: 121 VREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVN 180
Query: 593 GKEVDVKRATPKPD 634
G DV++ K +
Sbjct: 181 GHRCDVRKGLSKDE 194
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 93.5 bits (222), Expect = 1e-19
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Frame = +2
Query: 200 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 379
+R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 380 KARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFC 526
R K ++V G+ + ++D + +F+++GT+ E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 527 FITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 634
F+TF+ V+ + + G DV++ K +
Sbjct: 121 FVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 156
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/79 (26%), Positives = 42/79 (53%)
Frame = +2
Query: 152 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 331
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135
Query: 332 AGEHTINNKKVDPKKAKAR 388
H +N + D +K ++
Sbjct: 136 QKSHMVNGHRCDVRKGLSK 154
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 93.5 bits (222), Expect = 1e-19
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Frame = +2
Query: 200 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 379
+R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 380 KARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFC 526
R K ++V G+ + ++D + +F+++GT+ E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 527 FITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 634
F+TF+ V+ + + G DV++ K +
Sbjct: 121 FVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 156
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/79 (26%), Positives = 42/79 (53%)
Frame = +2
Query: 152 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 331
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135
Query: 332 AGEHTINNKKVDPKKAKAR 388
H +N + D +K ++
Sbjct: 136 QKSHMVNGHRCDVRKGLSK 154
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 79.0 bits (186), Expect = 3e-15
Identities = 54/183 (29%), Positives = 92/183 (50%), Gaps = 21/183 (11%)
Frame = +2
Query: 152 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 331
RKLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 49 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 108
Query: 332 AGEHTINNKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIRNFF 454
H + K VD K+A R K+ + G+++ + S D +R +F
Sbjct: 109 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 168
Query: 455 SEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLL--KTPKRTIGGKEVDVKRATPK 628
FGT+ VE+ Q +G F+ +E ++ + L + + + ++++V+ T
Sbjct: 169 ETFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKH 223
Query: 629 PDG 637
P+G
Sbjct: 224 PNG 226
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 79.0 bits (186), Expect = 3e-15
Identities = 54/183 (29%), Positives = 92/183 (50%), Gaps = 21/183 (11%)
Frame = +2
Query: 152 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 331
RKLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 69 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 128
Query: 332 AGEHTINNKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIRNFF 454
H + K VD K+A R K+ + G+++ + S D +R +F
Sbjct: 129 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 188
Query: 455 SEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLL--KTPKRTIGGKEVDVKRATPK 628
FGT+ VE+ Q +G F+ +E ++ + L + + + ++++V+ T
Sbjct: 189 ETFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKH 243
Query: 629 PDG 637
P+G
Sbjct: 244 PNG 246
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 79.0 bits (186), Expect = 3e-15
Identities = 54/183 (29%), Positives = 92/183 (50%), Gaps = 21/183 (11%)
Frame = +2
Query: 152 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 331
RKLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 70 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 129
Query: 332 AGEHTINNKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIRNFF 454
H + K VD K+A R K+ + G+++ + S D +R +F
Sbjct: 130 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 189
Query: 455 SEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLL--KTPKRTIGGKEVDVKRATPK 628
FGT+ VE+ Q +G F+ +E ++ + L + + + ++++V+ T
Sbjct: 190 ETFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKH 244
Query: 629 PDG 637
P+G
Sbjct: 245 PNG 247
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 64.9 bits (151), Expect = 5e-11
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Frame = +2
Query: 158 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 334
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 335 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPF 493
++ K + DP ++ G IF+ L I + I + FS FG IL ++
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153
Query: 494 DKTKNQRKGFCFITFESEQVV-NDLLKTPKRTIGGKEVDVKRATPK 628
D+ KG+ F+ FE+E+ N + K + GK+V V + P+
Sbjct: 154 DE-DGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPR 198
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +2
Query: 113 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 292
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362
Query: 293 VFKAPE 310
F+ PE
Sbjct: 363 CFEKPE 368
Score = 36.3 bits (80), Expect = 0.019
Identities = 42/168 (25%), Positives = 68/168 (40%), Gaps = 27/168 (16%)
Frame = +2
Query: 212 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 352
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 353 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPF 493
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350
Query: 494 DKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVKRATPKPD 634
D+ + KGF F+ FE E+ + + + + + K + V K D
Sbjct: 351 DE-NGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIGQRKED 397
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 64.9 bits (151), Expect = 5e-11
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Frame = +2
Query: 158 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 334
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 335 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPF 493
++ K + DP ++ G IF+ L I + I + FS FG IL ++
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153
Query: 494 DKTKNQRKGFCFITFESEQVV-NDLLKTPKRTIGGKEVDVKRATPK 628
D+ KG+ F+ FE+E+ N + K + GK+V V + P+
Sbjct: 154 DE-DGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPR 198
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +2
Query: 113 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 292
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362
Query: 293 VFKAPE 310
F+ PE
Sbjct: 363 CFEKPE 368
Score = 37.9 bits (84), Expect = 0.006
Identities = 43/168 (25%), Positives = 69/168 (41%), Gaps = 27/168 (16%)
Frame = +2
Query: 212 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 352
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 353 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPF 493
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350
Query: 494 DKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVKRATPKPD 634
D+ + KGF F+ FE E+ + + + + + K + V A K D
Sbjct: 351 DE-NGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRKED 397
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 61.7 bits (143), Expect = 4e-10
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Frame = +2
Query: 140 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 319
R+ D ++VGGL + ++ L + G + S+N+ D T +GF F+ F E D
Sbjct: 9 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68
Query: 320 -KVMAAGEHTINNKKVDPKKAKARH------GKIFVGGLSSEISDDEIRNFFSEFGTIL* 478
+ + K + KA A IFVG L E+ + + + FS FG IL
Sbjct: 69 YAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQ 128
Query: 479 V-EMPFDKTKNQRKGFCFITFESEQVVNDLLK 571
V ++ D KGF FI F S + + L+
Sbjct: 129 VPKIMRDVDSGTSKGFAFINFASFEASDTALE 160
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 122 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVF 298
SA D +FVG L E +K L D F A+G I + + D ++G S+GFAFI F
Sbjct: 90 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 149
Query: 299 KAPESIDKVMAA 334
+ E+ D + A
Sbjct: 150 ASFEASDTALEA 161
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 61.7 bits (143), Expect = 4e-10
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Frame = +2
Query: 140 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 319
R+ D ++VGGL + ++ L + G + S+N+ D T +GF F+ F E D
Sbjct: 19 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 78
Query: 320 -KVMAAGEHTINNKKVDPKKAKARH------GKIFVGGLSSEISDDEIRNFFSEFGTIL* 478
+ + K + KA A IFVG L E+ + + + FS FG IL
Sbjct: 79 YAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQ 138
Query: 479 V-EMPFDKTKNQRKGFCFITFESEQVVNDLLK 571
V ++ D KGF FI F S + + L+
Sbjct: 139 VPKIMRDVDSGTSKGFAFINFASFEASDTALE 170
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 122 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVF 298
SA D +FVG L E +K L D F A+G I + + D ++G S+GFAFI F
Sbjct: 100 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 159
Query: 299 KAPESIDKVMAA 334
+ E+ D + A
Sbjct: 160 ASFEASDTALEA 171
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 60.1 bits (139), Expect = 1e-09
Identities = 45/200 (22%), Positives = 90/200 (45%), Gaps = 12/200 (6%)
Frame = +2
Query: 71 QLNGNAENGGGDSQDHNSAEAPGRDDDRK---LFVGGLSWETTDKELRDHFGAYGEIESI 241
++ + ++ D +D S + D + L V G+ ++TTD+ + +F G +
Sbjct: 143 KVGSSDDSDSDDGRDGRSGRKRAVERDSQPVDLIVLGVDFKTTDECFQKYFEDIGTVVFC 202
Query: 242 NVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-------GKI 400
+K + G S+GF F+ + +KV+A +H I+ ++ D K R +I
Sbjct: 203 EIKRKSD-GNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVKVPDGRDKQGRPSISRI 261
Query: 401 FVGGLSSEISDDEIRNFF-SEFGTIL*VEMPFDK-TKNQRKGFCFITFESEQVVNDLLKT 574
FVG L+ ++ + ++R F E + + + D +GF F+T S + ++
Sbjct: 262 FVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKPFRGFAFVTLSSAEAAERIVSK 321
Query: 575 PKRTIGGKEVDVKRATPKPD 634
T+ G V + A P+ +
Sbjct: 322 GSLTVNGLSVGLSIAQPREE 341
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 59.7 bits (138), Expect = 2e-09
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 14/179 (7%)
Frame = +2
Query: 131 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGR-SRGFAFIVFKAP 307
APG +D R +FV L + TT+ E+R A + SI N+ RGFA++V +
Sbjct: 586 APGTEDARTIFVSNLDFTTTEDEIRQ---AIEGVASIRFARKANSDLVHRGFAYVVMEND 642
Query: 308 ESIDKVMAAGEHTINNKKV-----DPKK-------AKARHGKIFVGGLSSEISDDEIRNF 451
+ + + + + + DP+K K+FV + + +DDE++
Sbjct: 643 QKAQQALLKDRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKAL 702
Query: 452 FSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLKT-PKRTIGGKEVDVKRATP 625
FS+FGT+ V K + KG F+ F++E + + K + +E++V + P
Sbjct: 703 FSKFGTVTSVRRVTHK-DGKPKGIAFVDFDTEASAQKCVASGDKLMLRERELEVALSNP 760
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 59.3 bits (137), Expect = 2e-09
Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 11/189 (5%)
Frame = +2
Query: 5 LLXVILXMANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDR--KLFVGGLS 178
+L +L + ++ I +N + + D++ + +P D K+FVG +
Sbjct: 5 VLPAVLVVPKMESVVVPIAESTVINAK-DTTPSTAADNDVSPSPSEPDTDAIKMFVGQIP 63
Query: 179 WETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMA 331
+ + + R F YG + S N+ D +T S+G F+ F ++I+ KV+
Sbjct: 64 RQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIE 123
Query: 332 AGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQ 511
H + K D + R K+F+G LS + +++ +R F++FG I + D+
Sbjct: 124 GMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS 181
Query: 512 RKGFCFITF 538
R G F+TF
Sbjct: 182 R-GCAFVTF 189
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 59.3 bits (137), Expect = 2e-09
Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 11/189 (5%)
Frame = +2
Query: 5 LLXVILXMANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDR--KLFVGGLS 178
+L +L + ++ I +N + + D++ + +P D K+FVG +
Sbjct: 5 VLPAVLVVPKMESVVVPIAESTVINAK-DTTPSTAADNDVSPSPSEPDTDAIKMFVGQIP 63
Query: 179 WETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMA 331
+ + + R F YG + S N+ D +T S+G F+ F ++I+ KV+
Sbjct: 64 RQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIE 123
Query: 332 AGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQ 511
H + K D + R K+F+G LS + +++ +R F++FG I + D+
Sbjct: 124 GMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS 181
Query: 512 RKGFCFITF 538
R G F+TF
Sbjct: 182 R-GCAFVTF 189
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 59.3 bits (137), Expect = 2e-09
Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 11/189 (5%)
Frame = +2
Query: 5 LLXVILXMANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDR--KLFVGGLS 178
+L +L + ++ I +N + + D++ + +P D K+FVG +
Sbjct: 5 VLPAVLVVPKMESVVVPIAESTVINAK-DTTPSTAADNDVSPSPSEPDTDAIKMFVGQIP 63
Query: 179 WETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMA 331
+ + + R F YG + S N+ D +T S+G F+ F ++I+ KV+
Sbjct: 64 RQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIE 123
Query: 332 AGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQ 511
H + K D + R K+F+G LS + +++ +R F++FG I + D+
Sbjct: 124 GMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS 181
Query: 512 RKGFCFITF 538
R G F+TF
Sbjct: 182 R-GCAFVTF 189
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 59.3 bits (137), Expect = 2e-09
Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 11/189 (5%)
Frame = +2
Query: 5 LLXVILXMANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDR--KLFVGGLS 178
+L +L + ++ I +N + + D++ + +P D K+FVG +
Sbjct: 5 VLPAVLVVPKMESVVVPIAESTVINAK-DTTPSTAADNDVSPSPSEPDTDAIKMFVGQIP 63
Query: 179 WETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMA 331
+ + + R F YG + S N+ D +T S+G F+ F ++I+ KV+
Sbjct: 64 RQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIE 123
Query: 332 AGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQ 511
H + K D + R K+F+G LS + +++ +R F++FG I + D+
Sbjct: 124 GMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS 181
Query: 512 RKGFCFITF 538
R G F+TF
Sbjct: 182 R-GCAFVTF 189
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 59.3 bits (137), Expect = 2e-09
Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 11/189 (5%)
Frame = +2
Query: 5 LLXVILXMANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDR--KLFVGGLS 178
+L +L + ++ I +N + + D++ + +P D K+FVG +
Sbjct: 5 VLPAVLVVPKMESVVVPIAESTVINAK-DTTPSTAADNDVSPSPSEPDTDAIKMFVGQIP 63
Query: 179 WETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMA 331
+ + + R F YG + S N+ D +T S+G F+ F ++I+ KV+
Sbjct: 64 RQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIE 123
Query: 332 AGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQ 511
H + K D + R K+F+G LS + +++ +R F++FG I + D+
Sbjct: 124 GMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS 181
Query: 512 RKGFCFITF 538
R G F+TF
Sbjct: 182 R-GCAFVTF 189
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 59.3 bits (137), Expect = 2e-09
Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 11/189 (5%)
Frame = +2
Query: 5 LLXVILXMANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDR--KLFVGGLS 178
+L +L + ++ I +N + + D++ + +P D K+FVG +
Sbjct: 5 VLPAVLVVPKMESVVVPIAESTVINAK-DTTPSTAADNDVSPSPSEPDTDAIKMFVGQIP 63
Query: 179 WETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMA 331
+ + + R F YG + S N+ D +T S+G F+ F ++I+ KV+
Sbjct: 64 RQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIE 123
Query: 332 AGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQ 511
H + K D + R K+F+G LS + +++ +R F++FG I + D+
Sbjct: 124 GMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS 181
Query: 512 RKGFCFITF 538
R G F+TF
Sbjct: 182 R-GCAFVTF 189
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 59.3 bits (137), Expect = 2e-09
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = +2
Query: 107 SQDHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 280
+Q N+ G D K+FVGGL + T+DK L ++F +G+IE V TD NT +SRG
Sbjct: 18 AQSTNAEPVVGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRG 77
Query: 281 FAFIVFKAPESIDKVMAAGEHTINNKKVD 367
+ F+ K S ++ I+ +K +
Sbjct: 78 YGFVTMKDRASAERACKDPNPIIDGRKAN 106
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = +2
Query: 395 KIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 574
KIFVGGL SD + +F +FG I + D+ + +G+ F+T + K
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 575 PKRTIGGKEVDVKRA 619
P I G++ +V A
Sbjct: 96 PNPIIDGRKANVNLA 110
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 58.0 bits (134), Expect = 5e-09
Identities = 26/80 (32%), Positives = 45/80 (56%)
Frame = +2
Query: 128 EAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 307
EA ++ + +++ + W T +L +F YG I+S+N+ DP+TG RGFA I F +
Sbjct: 17 EARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSK 76
Query: 308 ESIDKVMAAGEHTINNKKVD 367
+ +K + H I+ +VD
Sbjct: 77 DGANKAIEQRPHVIDGDRVD 96
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/94 (24%), Positives = 42/94 (44%)
Frame = +2
Query: 344 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGF 523
T N K+ + K +++ + ++ ++F +G+I V M +D +GF
Sbjct: 9 TTNISKLIEARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGF 68
Query: 524 CFITFESEQVVNDLLKTPKRTIGGKEVDVKRATP 625
ITF+S+ N ++ I G VDV+ P
Sbjct: 69 ASITFDSKDGANKAIEQRPHVIDGDRVDVEPYIP 102
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 58.0 bits (134), Expect = 5e-09
Identities = 23/81 (28%), Positives = 43/81 (53%)
Frame = +2
Query: 122 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK 301
+AE + D R ++VG + W++T E+ +HF G++ + + D TG + FAF+ F+
Sbjct: 36 TAEEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQ 95
Query: 302 APESIDKVMAAGEHTINNKKV 364
ES+ + N+K+
Sbjct: 96 KLESVQLALVLSGTMFRNRKI 116
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 57.6 bits (133), Expect = 7e-09
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Frame = +2
Query: 158 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 334
L++G L + ++ L + F G + SI V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 335 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPF 493
I+ + + DP +A +G IF+ L I + + + FS FG IL ++
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178
Query: 494 DKTKNQRKGFCFITFESE-------QVVNDLLKTPKRTIGGK 598
D N KG+ F+ FE+E + VN +L + K+ GK
Sbjct: 179 DDEGNS-KGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGK 219
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +2
Query: 158 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 310
L+V + + D LRDHF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 46.4 bits (105), Expect = 2e-05
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 14/161 (8%)
Frame = +2
Query: 131 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 310
A R + +F+ L +K + D F +G I S V TD + G S+G+ F+ F+
Sbjct: 138 AARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEH 196
Query: 311 S----IDKV--MAAGEHTINNKKVDPKKAKAR--------HGKIFVGGLSSEISDDEIRN 448
S I+KV M + + K P+ + + + +FV + +++
Sbjct: 197 SAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSA 256
Query: 449 FFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLK 571
FS+FG I + D + + KGF F+ F + ++
Sbjct: 257 MFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQAVE 296
Score = 46.4 bits (105), Expect = 2e-05
Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Frame = +2
Query: 158 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-------KAPESI 316
+FV ++L F +GEI S V TD G+ +GF F+ F +A E +
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKL 298
Query: 317 -DKVMAAGEHTINNKKVDPKKAKARHGK------------------IFVGGLSSEISDDE 439
D ++ + ++ + K ++ K ++V + +++DD
Sbjct: 299 NDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDG 358
Query: 440 IRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVKR 616
+R+ FS FGTI ++ D+ + KGF F+ FE E+ + + IG K + V
Sbjct: 359 LRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVAL 417
Query: 617 ATPKPD 634
A K D
Sbjct: 418 AQRKED 423
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 57.6 bits (133), Expect = 7e-09
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Frame = +2
Query: 158 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 334
L++G L + ++ L + F G + SI V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 335 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPF 493
I+ + + DP +A +G IF+ L I + + + FS FG IL ++
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178
Query: 494 DKTKNQRKGFCFITFESE-------QVVNDLLKTPKRTIGGK 598
D N KG+ F+ FE+E + VN +L + K+ GK
Sbjct: 179 DDEGNS-KGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGK 219
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +2
Query: 158 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 310
L+V + + D LRDHF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 46.4 bits (105), Expect = 2e-05
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 14/161 (8%)
Frame = +2
Query: 131 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 310
A R + +F+ L +K + D F +G I S V TD + G S+G+ F+ F+
Sbjct: 138 AARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEH 196
Query: 311 S----IDKV--MAAGEHTINNKKVDPKKAKAR--------HGKIFVGGLSSEISDDEIRN 448
S I+KV M + + K P+ + + + +FV + +++
Sbjct: 197 SAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSA 256
Query: 449 FFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLK 571
FS+FG I + D + + KGF F+ F + ++
Sbjct: 257 MFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQAVE 296
Score = 46.4 bits (105), Expect = 2e-05
Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Frame = +2
Query: 158 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-------KAPESI 316
+FV ++L F +GEI S V TD G+ +GF F+ F +A E +
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKL 298
Query: 317 -DKVMAAGEHTINNKKVDPKKAKARHGK------------------IFVGGLSSEISDDE 439
D ++ + ++ + K ++ K ++V + +++DD
Sbjct: 299 NDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDG 358
Query: 440 IRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVKR 616
+R+ FS FGTI ++ D+ + KGF F+ FE E+ + + IG K + V
Sbjct: 359 LRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVAL 417
Query: 617 ATPKPD 634
A K D
Sbjct: 418 AQRKED 423
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 56.8 bits (131), Expect = 1e-08
Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 13/178 (7%)
Frame = +2
Query: 137 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF------ 298
G D+ R L+VG L T+ + F G + V D G + +AF+ F
Sbjct: 41 GSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQA 97
Query: 299 -KAPESIDKVMAAGEHTINNKKVDPKKAKA-----RHGKIFVGGLSSEISDDEIRNFFSE 460
+A ++++K + N V+P + ++ RH +FVG LSSE+ + ++R F
Sbjct: 98 SQALQTMNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQP 157
Query: 461 FGTIL*VEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTPKRTIGGKEVDVKRATPKP 631
FG + ++ D + KG+ F+++ + E+ + + + +G + + AT KP
Sbjct: 158 FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKP 215
Score = 48.8 bits (111), Expect = 3e-06
Identities = 42/176 (23%), Positives = 82/176 (46%), Gaps = 27/176 (15%)
Frame = +2
Query: 158 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 331
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 332 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 439
G TI N K D + + ++VG ++S +++DE
Sbjct: 197 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 255
Query: 440 IRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 604
IR F+ FG I V + + +G+ F+ F++ + +++ + +GG+ V
Sbjct: 256 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 305
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +2
Query: 74 LNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKT 253
+N N + SQ + E D + ++VG + + T +E+ HF G + + ++
Sbjct: 52 MNLNTSSQSNSSQSLLTPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQC 111
Query: 254 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNK--KVDPKK 376
D +G +GFA++ F E + +A + + + KVDPK+
Sbjct: 112 DRFSGHPKGFAYVEFTEKEGMQNALAMTDSLLRGRQIKVDPKR 154
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +2
Query: 371 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQ 550
+KA+A ++VG + + +EI F G++ V + D+ KGF ++ F ++
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKE 130
Query: 551 VVNDLLKTPKRTIGGKEVDV-KRATPKP 631
+ + L + G+++ V + T KP
Sbjct: 131 GMQNALAMTDSLLRGRQIKVDPKRTNKP 158
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 56.0 bits (129), Expect = 2e-08
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Frame = +2
Query: 41 NFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDH 211
N AQ + G+ G S +DDD R LFVG + + ++E+R
Sbjct: 129 NRAQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHV 188
Query: 212 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 391
F +G++E +++KT NT +AF++F+ + + A E + + K +
Sbjct: 189 FEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAEEQDRPIRAGGSRMKIGY 244
Query: 392 GK------IFVGGLSSEISDDEIRNFFSEFGTI 472
GK +FVGGL S + ++ F EFG +
Sbjct: 245 GKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFV 277
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Frame = +2
Query: 152 RKLFVGGL-SWETTDKE-LRDHFGAYGEIESIN 244
R+LFVGGL SW DKE L+ FG +G +E+I+
Sbjct: 251 RRLFVGGLGSW--CDKEILQKAFGEFGFVENID 281
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 56.0 bits (129), Expect = 2e-08
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Frame = +2
Query: 41 NFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDH 211
N AQ + G+ G S +DDD R LFVG + + ++E+R
Sbjct: 129 NRAQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHV 188
Query: 212 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 391
F +G++E +++KT NT +AF++F+ + + A E + + K +
Sbjct: 189 FEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAEEQDRPIRAGGSRMKIGY 244
Query: 392 GK------IFVGGLSSEISDDEIRNFFSEFGTI 472
GK +FVGGL S + ++ F EFG +
Sbjct: 245 GKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFV 277
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Frame = +2
Query: 152 RKLFVGGL-SWETTDKE-LRDHFGAYGEIESIN 244
R+LFVGGL SW DKE L+ FG +G +E+I+
Sbjct: 251 RRLFVGGLGSW--CDKEILQKAFGEFGFVENID 281
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 56.0 bits (129), Expect = 2e-08
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Frame = +2
Query: 41 NFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDH 211
N AQ + G+ G S +DDD R LFVG + + ++E+R
Sbjct: 106 NRAQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHV 165
Query: 212 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 391
F +G++E +++KT NT +AF++F+ + + A E + + K +
Sbjct: 166 FEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAEEQDRPIRAGGSRMKIGY 221
Query: 392 GK------IFVGGLSSEISDDEIRNFFSEFGTI 472
GK +FVGGL S + ++ F EFG +
Sbjct: 222 GKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFV 254
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Frame = +2
Query: 152 RKLFVGGL-SWETTDKE-LRDHFGAYGEIESIN 244
R+LFVGGL SW DKE L+ FG +G +E+I+
Sbjct: 228 RRLFVGGLGSW--CDKEILQKAFGEFGFVENID 258
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 55.6 bits (128), Expect = 3e-08
Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 11/167 (6%)
Frame = +2
Query: 5 LLXVILXMANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDR--KLFVGGLS 178
+L +L + ++ I +N + + D++ + +P D K+FVG +
Sbjct: 5 VLPAVLVVPKMESVVVPIAESTVINAK-DTTPSTAADNDVSPSPSEPDTDAIKMFVGQIP 63
Query: 179 WETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMA 331
+ + + R F YG + S N+ D +T S+G F+ F ++I+ KV+
Sbjct: 64 RQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIE 123
Query: 332 AGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 472
H + K D + R K+F+G LS + +++ +R F++FG I
Sbjct: 124 GMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHI 168
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +2
Query: 146 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 280
++RKLF+G LS + ++ LR+ F +G IE +V D + G+SRG
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRG 183
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +2
Query: 350 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCF 529
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 530 ITF 538
+TF
Sbjct: 101 VTF 103
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 55.6 bits (128), Expect = 3e-08
Identities = 42/186 (22%), Positives = 87/186 (46%), Gaps = 26/186 (13%)
Frame = +2
Query: 155 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------ES 313
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P ES
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 314 IDKVMAAGEH-------------TINNKKVDP-----KKAKARHGKIFVGGLSSEISDDE 439
++ M G + N + P +K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 440 IRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKR-TIGGKEVDVKR 616
+++ F FG I+ ++ T +GF ++ F + ++ + +GG+ + V +
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLGGQYLRVGK 282
Query: 617 ATPKPD 634
PD
Sbjct: 283 CVTPPD 288
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 55.6 bits (128), Expect = 3e-08
Identities = 42/186 (22%), Positives = 87/186 (46%), Gaps = 26/186 (13%)
Frame = +2
Query: 155 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------ES 313
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P ES
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 314 IDKVMAAGEH-------------TINNKKVDP-----KKAKARHGKIFVGGLSSEISDDE 439
++ M G + N + P +K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 440 IRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKR-TIGGKEVDVKR 616
+++ F FG I+ ++ T +GF ++ F + ++ + +GG+ + V +
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLGGQYLRVGK 282
Query: 617 ATPKPD 634
PD
Sbjct: 283 CVTPPD 288
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 55.2 bits (127), Expect = 4e-08
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Frame = +2
Query: 158 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESIDKVMAA 334
L + L T +E+R F + GEIES + D TG+S G+ F+ + + +++ V +
Sbjct: 44 LIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSF 103
Query: 335 GEHTINNKKVD-----PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDK 499
+ NK + P + + ++V G+ ++ E+ + F FG I+ + D
Sbjct: 104 NGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDN 163
Query: 500 TKNQRKGFCFITFESEQVVNDLLKT 574
KG F+ F+ + + +KT
Sbjct: 164 VTGLSKGVGFVRFDKKDEADVAIKT 188
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +2
Query: 398 IFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 574
+FV LSS+ D + FS+FG I+ V++ D T+ Q KG+ F++ + + N +L
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQ-QCKGYAFVSMSNYTEAYNAMLSL 434
Query: 575 PKRTIGGKEVDV--KRATP 625
+ GK + V K +TP
Sbjct: 435 NGTNLAGKTLQVVFKSSTP 453
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 53.6 bits (123), Expect = 1e-07
Identities = 37/155 (23%), Positives = 75/155 (48%), Gaps = 25/155 (16%)
Frame = +2
Query: 155 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------ES 313
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P ES
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 314 IDKVMAAGEH-------------TINNKKVDP-----KKAKARHGKIFVGGLSSEISDDE 439
++ M G + N + P +K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 440 IRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFES 544
+++ F FG I+ ++ T +GF ++ F +
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 155 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 331
+++V + + ++ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 52.8 bits (121), Expect = 2e-07
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 24/171 (14%)
Frame = +2
Query: 119 NSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVK---------------- 250
++A A ++ +FVG + +K +R F +G I S+ ++
Sbjct: 132 SNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTISSVRMRNLLPANEKLTKRVTHL 191
Query: 251 TDPNTGRSRGFAFIV-FKAPESIDKVMAAG-----EHTINNKKVDPKKAK-ARHGKIFVG 409
T + F V F A ES++K + +H I KV KK + + IFVG
Sbjct: 192 TGKLNDKQSSLTFYVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAIFVG 251
Query: 410 GLSSEISDDEIRNFFS-EFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVN 559
L EI++D + FFS + G + V + DK + KGF F+ F+ + V+
Sbjct: 252 NLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS 302
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 149 DRKLFVGGLSWETTDKELRDHFGAY-GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 325
D +FVG L +E T+ L F A G +E++ + D +TG+ +GFAF+ FK S+
Sbjct: 245 DMAIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS-- 302
Query: 326 MAAGEHTINNKKVDPKKAK 382
+A TI +K D + K
Sbjct: 303 LALSMETIKMEKRDLRITK 321
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 52.4 bits (120), Expect = 3e-07
Identities = 29/105 (27%), Positives = 55/105 (52%)
Frame = +2
Query: 146 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 325
D +++GGLS+ ++ ++ F YGE+ +IN+ D +TG+S+GFAF+ +K S +
Sbjct: 36 DSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRS--TI 93
Query: 326 MAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSE 460
+A N + + + H + + E +DDE + + E
Sbjct: 94 LAV--DNFNGISLHKRMIRVDHVEEYKVPKYKEDADDETKRLWEE 136
Score = 41.5 bits (93), Expect = 5e-04
Identities = 15/51 (29%), Positives = 33/51 (64%)
Frame = +2
Query: 398 IFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQ 550
I++GGLS +S+ ++ FS++G ++ + + DK + KGF F+ ++ ++
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQR 90
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 52.0 bits (119), Expect = 4e-07
Identities = 29/77 (37%), Positives = 38/77 (49%)
Frame = +2
Query: 80 GNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDP 259
G GGG + + + L V LS TT+K+LRD FG +GEI ++ D
Sbjct: 52 GGGGGGGGGRGRNQQYDRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDR 111
Query: 260 NTGRSRGFAFIVFKAPE 310
+G SRGF FI F E
Sbjct: 112 PSGNSRGFGFIYFNLIE 128
Score = 34.3 bits (75), Expect = 0.076
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 404 VGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITF 538
V LSS ++ ++R+ F EFG I ++ +D+ +GF FI F
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 51.2 bits (117), Expect = 6e-07
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 17/130 (13%)
Frame = +2
Query: 134 PGRDDDR-KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF---- 298
P +D D KLFVG + +K+LR F +G+I + D TG +G AF+ +
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 299 ------------KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEI 442
K +++ M +++ PK K K+F+G LS + S+DE+
Sbjct: 82 SAVRCQATLHDQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEV 140
Query: 443 RNFFSEFGTI 472
R F+ FG +
Sbjct: 141 RALFATFGEL 150
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +2
Query: 113 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 292
D A + DD+KLF+G LS + ++ E+R F +GE++ + V + G S+G AF+
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFV 169
Query: 293 VFK 301
+K
Sbjct: 170 KYK 172
Score = 35.5 bits (78), Expect = 0.033
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 395 KIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITF 538
K+FVG + + + ++R+ F +FG I + DK KG F+T+
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 51.2 bits (117), Expect = 6e-07
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 17/130 (13%)
Frame = +2
Query: 134 PGRDDDR-KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF---- 298
P +D D KLFVG + +K+LR F +G+I + D TG +G AF+ +
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 299 ------------KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEI 442
K +++ M +++ PK K K+F+G LS + S+DE+
Sbjct: 82 SAVRCQATLHDQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEV 140
Query: 443 RNFFSEFGTI 472
R F+ FG +
Sbjct: 141 RALFATFGEL 150
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +2
Query: 113 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 292
D A + DD+KLF+G LS + ++ E+R F +GE++ + V + G S+G AF+
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFV 169
Query: 293 VFK 301
+K
Sbjct: 170 KYK 172
Score = 35.5 bits (78), Expect = 0.033
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 395 KIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITF 538
K+FVG + + + ++R+ F +FG I + DK KG F+T+
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 51.2 bits (117), Expect = 6e-07
Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 5/161 (3%)
Frame = +2
Query: 98 GGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSR 277
GG D +++VG + + + L F G+I + + DP +G SR
Sbjct: 182 GGPPPDWEGPATGPAGQGHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASR 241
Query: 278 GFAFIVFKAPESIDKVMAAGE-HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEI---- 442
G+AF+ + E + H I+ K + ++F+G + S DEI
Sbjct: 242 GYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVSIANTRLFIGNIPKTKSKDEILEEL 301
Query: 443 RNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDL 565
+ ++ +P D K + +GFCF+ F + +D+
Sbjct: 302 KTHAEGVVDVIVYSVP-DNEKIKNRGFCFVDFIDHKTASDI 341
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 51.2 bits (117), Expect = 6e-07
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 34/173 (19%)
Frame = +2
Query: 155 KLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GRS-----RGFAFIVFKAPES 313
K+FVGG+S K + FG +G + VK PN+ G+S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 314 IDKVMAAGEHTINNK------------KVDPK--------KAKARHGKI-------FVGG 412
+ K+M+A N ++ P KARH +I F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325
Query: 413 LSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLK 571
L ++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
Frame = +2
Query: 209 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 388
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 389 HGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQR--------KGFCFITFES 544
K+FVGG+S ++ I FF +FGT+ V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 545 EQVVNDLLKTPKR 583
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 51.2 bits (117), Expect = 6e-07
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 34/173 (19%)
Frame = +2
Query: 155 KLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GRS-----RGFAFIVFKAPES 313
K+FVGG+S K + FG +G + VK PN+ G+S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 314 IDKVMAAGEHTINNK------------KVDPK--------KAKARHGKI-------FVGG 412
+ K+M+A N ++ P KARH +I F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325
Query: 413 LSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLK 571
L ++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
Frame = +2
Query: 209 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 388
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 389 HGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQR--------KGFCFITFES 544
K+FVGG+S ++ I FF +FGT+ V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 545 EQVVNDLLKTPKR 583
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 51.2 bits (117), Expect = 6e-07
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 34/173 (19%)
Frame = +2
Query: 155 KLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GRS-----RGFAFIVFKAPES 313
K+FVGG+S K + FG +G + VK PN+ G+S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 314 IDKVMAAGEHTINNK------------KVDPK--------KAKARHGKI-------FVGG 412
+ K+M+A N ++ P KARH +I F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325
Query: 413 LSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLK 571
L ++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
Frame = +2
Query: 209 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 388
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 389 HGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQR--------KGFCFITFES 544
K+FVGG+S ++ I FF +FGT+ V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 545 EQVVNDLLKTPKR 583
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 50.8 bits (116), Expect = 8e-07
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = +2
Query: 119 NSAEAPGRDDD--RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 292
N AE P +D R LFVG +++ET++ +LR F AYG+I+ + + D G+ RG+AFI
Sbjct: 91 NPAENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFI 149
Query: 293 VF 298
+
Sbjct: 150 EY 151
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 49.6 bits (113), Expect = 2e-06
Identities = 46/187 (24%), Positives = 77/187 (41%), Gaps = 16/187 (8%)
Frame = +2
Query: 131 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 310
A G +D R LFV L TD+ L F G + + + G + +AF+ F
Sbjct: 33 ASGSEDPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFE---GLNDPYAFVEFSDHN 89
Query: 311 SIDKVMAA--GEHTINNKK-----VDP--------KKAKARHGKIFVGGLSSEISDDEIR 445
+ + G + + +P K +RH +FVG L SEI ++R
Sbjct: 90 QATLALQSHNGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLR 149
Query: 446 NFFSEFGTIL*VEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTPKRTIGGKEVDVKRAT 622
F +FG + ++ D N+ KG+ F+++ E + + +G + + AT
Sbjct: 150 EAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWAT 209
Query: 623 PKPDGPG 643
KPD G
Sbjct: 210 RKPDEDG 216
Score = 32.3 bits (70), Expect = 0.31
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Frame = +2
Query: 341 HTINNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQR 514
H + K D +A A + ++VG +++ + +DEIR F FG P ++ + +
Sbjct: 237 HNQSEKTYDEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFG-------PINEVRTFK 288
Query: 515 -KGFCFITFES-EQVVNDLLKTPKRTIGGKEV 604
+G+ F+ FE+ E +++ IGG+ V
Sbjct: 289 IQGYAFVKFETKESAARAIVQMNNADIGGQIV 320
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 49.6 bits (113), Expect = 2e-06
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 22/155 (14%)
Frame = +2
Query: 146 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 325
D R L + ++ +T ++L + F A G + + + TD TGRS+G ++ F ES+
Sbjct: 23 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLG 82
Query: 326 MAAGEHTINNKKVDPKKAKARHGK----------------------IFVGGLSSEISDDE 439
+A + + ++ A + + V L +I +
Sbjct: 83 LALNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKM 142
Query: 440 IRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFES 544
IR+ F FG I +++ D + R GF ITF +
Sbjct: 143 IRDIFESFGRIEKIDLEVDSNRENR-GFATITFRN 176
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +2
Query: 131 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 310
APG + V L + +K +RD F ++G IE I+++ D N +RGFA I F+ +
Sbjct: 120 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 178
Query: 311 SIDK 322
K
Sbjct: 179 DAQK 182
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/88 (19%), Positives = 38/88 (43%)
Frame = +2
Query: 353 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFI 532
N K++ + + + ++ + ++ FFS G + V + D + KG C++
Sbjct: 12 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 71
Query: 533 TFESEQVVNDLLKTPKRTIGGKEVDVKR 616
F E+ V L + + G + ++R
Sbjct: 72 EFWDEESVPLGLALNGQRLMGAPLQIQR 99
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 49.6 bits (113), Expect = 2e-06
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 22/155 (14%)
Frame = +2
Query: 146 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 325
D R L + ++ +T ++L + F A G + + + TD TGRS+G ++ F ES+
Sbjct: 168 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLG 227
Query: 326 MAAGEHTINNKKVDPKKAKARHGK----------------------IFVGGLSSEISDDE 439
+A + + ++ A + + V L +I +
Sbjct: 228 LALNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKM 287
Query: 440 IRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFES 544
IR+ F FG I +++ D + R GF ITF +
Sbjct: 288 IRDIFESFGRIEKIDLEVDSNRENR-GFATITFRN 321
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +2
Query: 131 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 310
APG + V L + +K +RD F ++G IE I+++ D N +RGFA I F+ +
Sbjct: 265 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 323
Query: 311 SIDK 322
K
Sbjct: 324 DAQK 327
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/88 (19%), Positives = 38/88 (43%)
Frame = +2
Query: 353 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFI 532
N K++ + + + ++ + ++ FFS G + V + D + KG C++
Sbjct: 157 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 216
Query: 533 TFESEQVVNDLLKTPKRTIGGKEVDVKR 616
F E+ V L + + G + ++R
Sbjct: 217 EFWDEESVPLGLALNGQRLMGAPLQIQR 244
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +2
Query: 158 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 328
++VG ++TT++EL + F + G+I ++ + D TGR RGFAFI F S + +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +2
Query: 398 IFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESE 547
++VG + +++E+ NFFS G I V + D+ + +GF FI F E
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEE 56
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 48.8 bits (111), Expect = 3e-06
Identities = 42/176 (23%), Positives = 82/176 (46%), Gaps = 27/176 (15%)
Frame = +2
Query: 158 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 331
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 332 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 439
G TI N K D + + ++VG ++S +++DE
Sbjct: 84 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 142
Query: 440 IRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 604
IR F+ FG I V + + +G+ F+ F++ + +++ + +GG+ V
Sbjct: 143 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 192
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 386 RHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITF-ESEQVVND 562
RH +FVG LSSE+ + ++R F FG + ++ D + KG+ F+++ + E+
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 79
Query: 563 LLKTPKRTIGGKEVDVKRATPKP 631
+ + + +G + + AT KP
Sbjct: 80 IEQMNGQWLGRRTIRTNWATRKP 102
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 48.8 bits (111), Expect = 3e-06
Identities = 42/176 (23%), Positives = 82/176 (46%), Gaps = 27/176 (15%)
Frame = +2
Query: 158 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 331
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 332 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 439
G TI N K D + + ++VG ++S +++DE
Sbjct: 94 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 152
Query: 440 IRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 604
IR F+ FG I V + + +G+ F+ F++ + +++ + +GG+ V
Sbjct: 153 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 202
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 386 RHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITF-ESEQVVND 562
RH +FVG LSSE+ + ++R F FG + ++ D + KG+ F+++ + E+
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 89
Query: 563 LLKTPKRTIGGKEVDVKRATPKP 631
+ + + +G + + AT KP
Sbjct: 90 IEQMNGQWLGRRTIRTNWATRKP 112
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 48.8 bits (111), Expect = 3e-06
Identities = 42/176 (23%), Positives = 82/176 (46%), Gaps = 27/176 (15%)
Frame = +2
Query: 158 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 331
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 332 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 439
G TI N K D + + ++VG ++S +++DE
Sbjct: 165 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 223
Query: 440 IRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 604
IR F+ FG I V + + +G+ F+ F++ + +++ + +GG+ V
Sbjct: 224 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 273
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 386 RHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITF-ESEQVVND 562
RH +FVG LSSE+ + ++R F FG + ++ D + KG+ F+++ + E+
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 160
Query: 563 LLKTPKRTIGGKEVDVKRATPKP 631
+ + + +G + + AT KP
Sbjct: 161 IEQMNGQWLGRRTIRTNWATRKP 183
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +2
Query: 398 IFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTK 505
++VG L S +++D I F++ G++ ++ FD+ K
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEMK 83
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 47.6 bits (108), Expect = 8e-06
Identities = 45/191 (23%), Positives = 91/191 (47%), Gaps = 28/191 (14%)
Frame = +2
Query: 116 HNSAEAPG--RDDDRK---LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 280
H+++E P R D K +FVG LS + +++ L+ F +GE+ V D T +S+G
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177
Query: 281 FAFIVFKAPESIDKVMAA------GEHTI--------NNKKVDPK--------KAKARHG 394
+ F+ F ++ + +A G+ + N+++ K KA +
Sbjct: 178 YGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNT 237
Query: 395 KIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQ-VVNDLLK 571
++VG +S + +D ++R+ FS +G I V + K QR + F+ +E ++ +++
Sbjct: 238 SVYVGNISQQTTDADLRDLFSTYGDIAEVRI----FKTQR--YAFVRYEKKECATKAIME 291
Query: 572 TPKRTIGGKEV 604
+ + G +V
Sbjct: 292 MNGKEMAGNQV 302
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 46.8 bits (106), Expect = 1e-05
Identities = 17/47 (36%), Positives = 32/47 (68%)
Frame = +2
Query: 158 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 298
++VG + ++ T++E+ ++F A G + ++ + D TGR RGFAF+ F
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
Score = 37.1 bits (82), Expect = 0.011
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +2
Query: 398 IFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESE 547
++VG + + +++EI N+F+ G + V + +D+ + +GF F+ F E
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEE 57
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +2
Query: 398 IFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQ 550
+FVG +S ++S+D IR+ FS+ G +L ++M D+ + KG+ FI F Q
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQ 70
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 137 GRD-DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 298
G D R +FVG +S++ ++ +R F G + SI + D TG+ +G+ FI F
Sbjct: 12 GNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +2
Query: 113 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 292
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 244 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 302
Query: 293 VFKAPE 310
F+ PE
Sbjct: 303 CFEKPE 308
Score = 37.9 bits (84), Expect = 0.006
Identities = 43/168 (25%), Positives = 69/168 (41%), Gaps = 27/168 (16%)
Frame = +2
Query: 212 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 352
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 173 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 230
Query: 353 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPF 493
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 231 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 290
Query: 494 DKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVKRATPKPD 634
D+ + KGF F+ FE E+ + + + + + K + V A K D
Sbjct: 291 DE-NGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRKED 337
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 158 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 328
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +2
Query: 113 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 292
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 241 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 299
Query: 293 VFKAPE 310
F+ PE
Sbjct: 300 CFEKPE 305
Score = 44.8 bits (101), Expect = 5e-05
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +2
Query: 365 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFES 544
DP ++ G IF+ L I + I + FS FG IL ++ D+ KG+ F+ FE+
Sbjct: 48 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 106
Query: 545 EQVV-NDLLKTPKRTIGGKEVDVKRATPK 628
E+ N + K + GK+V V + P+
Sbjct: 107 EEAAQNAIQKVNGMLLAGKKVFVGKFQPR 135
Score = 37.9 bits (84), Expect = 0.006
Identities = 43/168 (25%), Positives = 69/168 (41%), Gaps = 27/168 (16%)
Frame = +2
Query: 212 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 352
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 170 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 227
Query: 353 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPF 493
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 228 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 287
Query: 494 DKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVKRATPKPD 634
D+ + KGF F+ FE E+ + + + + + K + V A K D
Sbjct: 288 DE-NGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRKED 334
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +2
Query: 389 HGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLL 568
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 163
Query: 569 K 571
+
Sbjct: 164 E 164
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +2
Query: 158 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 298
++VG ++TT+ +L ++F G + ++ + D TGR RGFAF+ F
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
Score = 37.9 bits (84), Expect = 0.006
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +2
Query: 398 IFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESE 547
++VG + ++D++ N+FS+ G + V + D+ + +GF F+ F E
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEE 55
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/97 (24%), Positives = 52/97 (53%)
Frame = +2
Query: 155 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 334
++FVGG TT+ ELR+HF + ++ + + + G+S+G+ FI F+ + +++
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI--- 122
Query: 335 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIR 445
+K+ PK+ + R K+ +G +I+ + +
Sbjct: 123 -------RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 152
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +2
Query: 395 KIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 571
+IFVGG + ++ E+R F +F + V+M Q KG+ FITFE+E ++ K
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 125
Query: 572 TPKR 583
TPK+
Sbjct: 126 TPKQ 129
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/97 (24%), Positives = 52/97 (53%)
Frame = +2
Query: 155 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 334
++FVGG TT+ ELR+HF + ++ + + + G+S+G+ FI F+ + +++
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI--- 123
Query: 335 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIR 445
+K+ PK+ + R K+ +G +I+ + +
Sbjct: 124 -------RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 153
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +2
Query: 395 KIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 571
+IFVGG + ++ E+R F +F + V+M Q KG+ FITFE+E ++ K
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 126
Query: 572 TPKR 583
TPK+
Sbjct: 127 TPKQ 130
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 44.4 bits (100), Expect = 7e-05
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +2
Query: 137 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK-APES 313
G +D+K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F+ ++
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDA 59
Query: 314 IDKVMAAGEHTINNKKV 364
D V A + + +++
Sbjct: 60 EDAVRARDGYEFDGRRI 76
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/60 (36%), Positives = 35/60 (58%)
Frame = +2
Query: 152 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 331
R L+VGG + + T+K L F +G++ +I++ D +G+ RGF F+ F E D MA
Sbjct: 11 RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAE--DAAMA 68
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 386 RHGKIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFE-SEQVVND 562
R ++VGG + ++++ + F FG ++ + +P D + +GF F+ F+ +E
Sbjct: 9 RKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMA 68
Query: 563 LLKTPKRTIGGKEVDVKRATP 625
+ + + GK + V A P
Sbjct: 69 IDNMNESELFGKTIRVNFARP 89
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 44.4 bits (100), Expect = 7e-05
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +2
Query: 137 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK-APES 313
G +D+K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F+ ++
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDA 59
Query: 314 IDKVMAAGEHTINNKKV 364
D V A + + +++
Sbjct: 60 EDAVRARDGYEFDGRRI 76
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 44.0 bits (99), Expect = 9e-05
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +2
Query: 140 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 319
R D+ V L E + ELRD FG G + I + D TG +GFAF+ F++ +
Sbjct: 172 RSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAA 231
Query: 320 KVMA 331
+ +A
Sbjct: 232 RAIA 235
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +2
Query: 404 VGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFES 544
V L E+++DE+R+ F + G ++ + + DK KGF F+TFES
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFES 226
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +2
Query: 155 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 313
+LF+ L + T + +L+ F YGE+ + V D TG +GFA + F PE+
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEA 332
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/69 (33%), Positives = 33/69 (47%)
Frame = +2
Query: 155 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 334
+L V L T+++LR F YG+I ++K G+ RGFAF+ F S +A
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAK 62
Query: 335 GEHTINNKK 361
T N K
Sbjct: 63 SNQTFFNSK 71
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = +2
Query: 86 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 265
+ GGGD + AP + L + LS++TT +LR F YG+I +++ D +
Sbjct: 2 SRGGGGDRR-----AAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYS 56
Query: 266 GRSRGFAFIVF 298
+S+GF F+ F
Sbjct: 57 RQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = +2
Query: 86 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 265
+ GGGD + AP + L + LS++TT +LR F YG+I +++ D +
Sbjct: 2 SRGGGGDRR-----AAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYS 56
Query: 266 GRSRGFAFIVF 298
+S+GF F+ F
Sbjct: 57 RQSKGFGFVRF 67
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +2
Query: 146 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 325
D + +F+G + + +T +E+ +HF G+I + D T + + FA+I F SI+
Sbjct: 53 DAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENA 112
Query: 326 M 328
+
Sbjct: 113 L 113
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 41.5 bits (93), Expect = 5e-04
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Frame = +2
Query: 104 DSQDHNSAEAPGRDDDRKL-FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 280
D + ++ AP R + + FV + E T+ ++ D F YG+I++I++ D TG +G
Sbjct: 38 DEESSATSGAPQRSVEGWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKG 97
Query: 281 FAFIVFKAPESIDKVMAAGEHTI---NNKKVD 367
+A + ++ + ++ + T N KVD
Sbjct: 98 YALVEYETQKEANEAIDQSNDTDLLGQNVKVD 129
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +2
Query: 398 IFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 577
+FV + E ++D++ + FSE+G I + + D+ KG+ + +E+++ N+ +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 578 KRT-IGGKEVDV 610
T + G+ V V
Sbjct: 117 NDTDLLGQNVKV 128
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +2
Query: 134 PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 313
P D +++V + + +++L F AYG + S+ + T N S+GF F+ + ES
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102
Query: 314 IDKVMAA-GEHTINNKKVDPKKAKARHGKI 400
+K AA E + + ++ ++A K+
Sbjct: 103 CEKARAALHESHVQGRIIEVRRATPTRRKL 132
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +2
Query: 134 PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 313
P D +++V + + +++L F AYG + S+ + T N S+GF F+ + ES
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102
Query: 314 IDKVMAA-GEHTINNKKVDPKKAKARHGKI 400
+K AA E + + ++ ++A K+
Sbjct: 103 CEKARAALHESHVQGRIIEVRRATPTRRKL 132
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +2
Query: 170 GLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI 349
GL WE T++ELRD FG G IES+ + GR+ G A +VF E + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 350 NNKKVD 367
++ ++
Sbjct: 68 GSRYIE 73
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/78 (28%), Positives = 39/78 (50%)
Frame = +2
Query: 410 GLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 589
GL E ++ E+R+FF G I +E+P + + G + F +E+ N+ LK + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIP--RRNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 590 GGKEVDVKRATPKPDGPG 643
G + ++V A P G
Sbjct: 68 GSRYIEVFPAGGAPTRRG 85
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +2
Query: 170 GLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI 349
GL WE T++ELRD FG G IES+ + GR+ G A +VF E + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 350 NNKKVD 367
++ ++
Sbjct: 68 GSRYIE 73
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/78 (28%), Positives = 39/78 (50%)
Frame = +2
Query: 410 GLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 589
GL E ++ E+R+FF G I +E+P + + G + F +E+ N+ LK + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIP--RRNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 590 GGKEVDVKRATPKPDGPG 643
G + ++V A P G
Sbjct: 68 GSRYIEVFPAGGAPTRRG 85
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 40.7 bits (91), Expect = 9e-04
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 146 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 325
D + +F+G + + +T +E+ +HF G I + D T + + FA+I F SI+
Sbjct: 59 DAKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENA 118
Query: 326 M 328
+
Sbjct: 119 L 119
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 398 IFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQ 550
+++ GL +DD +R S++G I + DK N KG+ F+ FES Q
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 159
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 398 IFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQ 550
+++ GL +DD +R S++G I + DK N KG+ F+ FES Q
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 133
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = +2
Query: 143 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 322
D K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 346
Query: 323 VMA 331
+A
Sbjct: 347 AIA 349
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 395 KIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITF 538
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = +2
Query: 143 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 322
D K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 346
Query: 323 VMA 331
+A
Sbjct: 347 AIA 349
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 395 KIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITF 538
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = +2
Query: 143 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 322
D K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 263 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 321
Query: 323 VMA 331
+A
Sbjct: 322 AIA 324
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 395 KIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITF 538
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 313
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = +2
Query: 143 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 322
D K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 266 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 324
Query: 323 VMA 331
+A
Sbjct: 325 AIA 327
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 395 KIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITF 538
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 316
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 38.7 bits (86), Expect = 0.004
Identities = 39/131 (29%), Positives = 55/131 (41%), Gaps = 11/131 (8%)
Frame = +2
Query: 77 NGNAENGGG-DSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI---- 241
+G+A +GG D D + A DDRK+ V +S + T +L+ F YG+I S
Sbjct: 86 DGDAFDGGETDDFDASIAFQHTSRDDRKIVVSNISAKVTQSQLQSFFSQYGKITSCILPR 145
Query: 242 -NVKTD-----PNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIF 403
KT P R+ G A I FK E D+ A + K D + +
Sbjct: 146 EEKKTSVFGTLPKHSRNCGTATITFKKSEHADRAKNANPEEL--KFYDQVMVVSAYVSKK 203
Query: 404 VGGLSSEISDD 436
GG +SDD
Sbjct: 204 RGGKGLVLSDD 214
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/79 (21%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +2
Query: 395 KIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITF-ESEQVVNDLLK 571
++F G L +E+SD+ + F ++ + ++ + N+ KG+ F++F +SE V + +
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMRE 263
Query: 572 TPKRTIGGKEVDVKRATPK 628
+ +G + + ++++ K
Sbjct: 264 MDGKYVGNRPIKLRKSAWK 282
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +2
Query: 149 DRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 328
+R L++ L ++ T +E+ + FG +G + I V NT +RG AF+V+ E I
Sbjct: 18 NRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVG---NTAETRGTAFVVY---EDIFDAK 71
Query: 329 AAGEH 343
A EH
Sbjct: 72 TACEH 76
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 37.1 bits (82), Expect = 0.011
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 152 RKLFVGGLSWETTDKELRDHFGAYG 226
RK+FVGG+ W+ T+ L+D FG +G
Sbjct: 295 RKIFVGGVPWDITEAALKDSFGEFG 319
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 395 KIFVGGLSSEISDDEIRNFFSEFGTIL*VEMP 490
KIFVGG+ +I++ +++ F EFG+ VE P
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFGSCA-VEWP 326
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 36.7 bits (81), Expect = 0.014
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = +2
Query: 143 DDDRKLFVGGLSWETTDKEL-RDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 319
D R +F+GG+ T ++L R G YG++ + + DP +G A + F ++
Sbjct: 362 DHRRTVFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFV 421
Query: 320 KVMAAG----EHTINNKKVDPK 373
+ ++ H NNK+V+ K
Sbjct: 422 RAISGRFVQVNHAENNKRVEIK 443
Score = 31.1 bits (67), Expect = 0.71
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 323 VMAAGEHTINNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTIL 475
+M + + K P A+ + K+F+GGL ++S++++ F FG +L
Sbjct: 221 LMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVL 272
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/27 (37%), Positives = 21/27 (77%)
Frame = +2
Query: 152 RKLFVGGLSWETTDKELRDHFGAYGEI 232
RK+F+GGL + +++++ FGA+G++
Sbjct: 245 RKVFIGGLPIDVSEEQVWATFGAFGKV 271
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 35.5 bits (78), Expect = 0.033
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +2
Query: 158 LFVGGL----SWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 325
L++G L + + T+K+L D F YG+I + V T+ +G AFI F E+ ++
Sbjct: 237 LYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTE------KGCAFIEFTTREAAER- 289
Query: 326 MAAGEHTINNKKVDPKKAKARHGK 397
A E + N + K+ R G+
Sbjct: 290 --AAERSFNKTFIKGKRLTIRWGE 311
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 35.1 bits (77), Expect = 0.044
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 158 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 322
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 398 IFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFES 544
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 35.1 bits (77), Expect = 0.044
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 158 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 322
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 398 IFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFES 544
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 35.1 bits (77), Expect = 0.044
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 158 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 322
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 228
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 398 IFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFES 544
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 222
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 35.1 bits (77), Expect = 0.044
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 398 IFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQ 550
++VG LS +D++ F G + V M D+ K GFCF+ + + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTRE 89
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/85 (23%), Positives = 40/85 (47%)
Frame = +2
Query: 158 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 337
L+VG LS+ T + ++ + FG G++ + + D GF F+ + E + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELAL--- 95
Query: 338 EHTINNKKVDPKKAKARHGKIFVGG 412
I+N ++D + +A F+ G
Sbjct: 96 -QNISNTRMDDRVIRADWDAGFIEG 119
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 35.1 bits (77), Expect = 0.044
Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 2/186 (1%)
Frame = +2
Query: 80 GNAENGGGDSQDHNSAEAPGRDDDRK--LFVGGLSWETTDKELRDHFGAYGEIESINVKT 253
G + NG ++ E P + + LFVG L E + EL++ F +G+I +
Sbjct: 90 GTSFNGAAFTESQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLS- 148
Query: 254 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISD 433
+GFAF+ + A + I + + + I V LS +S+
Sbjct: 149 ------GKGFAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSN 202
Query: 434 DEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVK 613
+ + + FS FG + D+ K + G + FE + N+ + + +V +
Sbjct: 203 EMLYHAFSHFGDVERAVHIVDE-KGRPTGEGIVEFERKPNCNEAMAAIR-----DKVFLL 256
Query: 614 RATPKP 631
A+PKP
Sbjct: 257 TASPKP 262
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 35.1 bits (77), Expect = 0.044
Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 2/186 (1%)
Frame = +2
Query: 80 GNAENGGGDSQDHNSAEAPGRDDDRK--LFVGGLSWETTDKELRDHFGAYGEIESINVKT 253
G + NG ++ E P + + LFVG L E + EL++ F +G+I +
Sbjct: 90 GTSFNGAAFTESQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLS- 148
Query: 254 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISD 433
+GFAF+ + A + I + + + I V LS +S+
Sbjct: 149 ------GKGFAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSN 202
Query: 434 DEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVK 613
+ + + FS FG + D+ K + G + FE + N+ + + +V +
Sbjct: 203 EMLYHAFSHFGDVERAVHIVDE-KGRPTGEGIVEFERKPNCNEAMAAIR-----DKVFLL 256
Query: 614 RATPKP 631
A+PKP
Sbjct: 257 TASPKP 262
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 34.7 bits (76), Expect = 0.058
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 395 KIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 574
+I++G L+S +S+ +I +FF +G I V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 575 PK-RTIGGKEVDVKRATPKPDG 637
+ +GG+ V + + P+ G
Sbjct: 56 LNGKELGGERVILDYSKPRGGG 77
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/86 (20%), Positives = 39/86 (45%)
Frame = +2
Query: 155 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 334
++++G L+ ++K++ F YG+I + +K GF F+ F + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEFDDKRDAEDAV-- 53
Query: 335 GEHTINNKKVDPKKAKARHGKIFVGG 412
H +N K++ ++ + K GG
Sbjct: 54 --HDLNGKELGGERVILDYSKPRGGG 77
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 34.7 bits (76), Expect = 0.058
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 395 KIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 574
+I++G L+S +S+ +I +FF +G I V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 575 PK-RTIGGKEVDVKRATPKPDG 637
+ +GG+ V + + P+ G
Sbjct: 56 LNGKELGGERVILDYSKPRGGG 77
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/86 (20%), Positives = 39/86 (45%)
Frame = +2
Query: 155 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 334
++++G L+ ++K++ F YG+I + +K GF F+ F + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEFDDKRDAEDAV-- 53
Query: 335 GEHTINNKKVDPKKAKARHGKIFVGG 412
H +N K++ ++ + K GG
Sbjct: 54 --HDLNGKELGGERVILDYSKPRGGG 77
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 34.7 bits (76), Expect = 0.058
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 395 KIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 574
+I++G L+S +S+ +I +FF +G I V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 575 PK-RTIGGKEVDVKRATPKPDG 637
+ +GG+ V + + P+ G
Sbjct: 56 LNGKELGGERVILDYSKPRGGG 77
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/86 (20%), Positives = 39/86 (45%)
Frame = +2
Query: 155 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 334
++++G L+ ++K++ F YG+I + +K GF F+ F + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEFDDKRDAEDAV-- 53
Query: 335 GEHTINNKKVDPKKAKARHGKIFVGG 412
H +N K++ ++ + K GG
Sbjct: 54 --HDLNGKELGGERVILDYSKPRGGG 77
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 34.7 bits (76), Expect = 0.058
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +2
Query: 98 GGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSR 277
G + + S + D R+L V + ++ + +L F G + ++V+ N S+
Sbjct: 82 GPVAPNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSK 139
Query: 278 GFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKAR-HGK 397
GF F+ + P+ D+ A TI ++V+ A R H K
Sbjct: 140 GFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 34.7 bits (76), Expect = 0.058
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +2
Query: 98 GGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSR 277
G + + S + D R+L V + ++ + +L F G + ++V+ N S+
Sbjct: 82 GPVAPNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSK 139
Query: 278 GFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKAR-HGK 397
GF F+ + P+ D+ A TI ++V+ A R H K
Sbjct: 140 GFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 33.9 bits (74), Expect = 0.10
Identities = 13/54 (24%), Positives = 32/54 (59%)
Frame = +2
Query: 146 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 307
+ + +F+ LS++T ++ +++ +G+I+ + ++G S+G AF+ F P
Sbjct: 261 EGKVVFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTP 314
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 33.9 bits (74), Expect = 0.10
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 395 KIFVGGLSSEISDDEIRNFFSEFGTI 472
K+FVGGL S + + +I NFFS +G +
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGRL 114
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 395 KIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPF-DKTKNQRKGFCFITFESEQVVNDLL 568
+++VGG S+ +S ++IRN ++ V + + + +GF F+ S N LL
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFVQCRSLAEANVLL 68
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Frame = +2
Query: 146 DDRKLFVGGLSWETTDKEL-RDHFGAYGEIESI-----NVKTDPNTGRSRGFAFIVFK 301
++R+++VG + ++ T+KEL D Y IE++ +K+ R GFAF+ FK
Sbjct: 15 ENRQVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAKRPPGFAFVTFK 72
>Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical
protein K08F4.2 protein.
Length = 473
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Frame = +2
Query: 146 DDRKLFVGGLSWETT-------DKELRDHFGAYGEIESI----NVKTDPNTGRSRGFAFI 292
++RK+++GG++ E + E++ F YGEIE + V PN FAFI
Sbjct: 324 NERKIYLGGITREIVPSNTAQAESEIKQVFYKYGEIEEVRMPRKVLDSPNDTSKHAFAFI 383
Query: 293 VFKAPESIDKVMAA 334
+ + + A
Sbjct: 384 TMRNKAGVKAIFEA 397
>L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical
protein R05D3.8 protein.
Length = 187
Score = 31.9 bits (69), Expect = 0.41
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 146 DDRKLFVGGLSWET-TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 322
+ ++LFV + T KEL+ +FGAYG+I + +D + G F I F S+D
Sbjct: 29 ESKRLFVSYFPLDRLTSKELKMNFGAYGKITDVEFVSD-SEGPLH-FCIITFADSRSVDV 86
Query: 323 VM 328
++
Sbjct: 87 LL 88
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 31.5 bits (68), Expect = 0.54
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 395 KIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 574
K++VGGL S+ + E+ F FG I V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVRA 58
Query: 575 -PKRTIGGKEVDVKRATPKPDGPG 643
I G V+ +T + G G
Sbjct: 59 LDGSRICGVRARVELSTGQRRGGG 82
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 31.5 bits (68), Expect = 0.54
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 395 KIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 574
K++VGGL S+ + E+ F FG I V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVRA 58
Query: 575 -PKRTIGGKEVDVKRATPKPDGPG 643
I G V+ +T + G G
Sbjct: 59 LDGSRICGVRARVELSTGQRRGGG 82
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 31.5 bits (68), Expect = 0.54
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 395 KIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 574
K++VGGL S+ + E+ F FG I V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVRA 58
Query: 575 -PKRTIGGKEVDVKRATPKPDGPG 643
I G V+ +T + G G
Sbjct: 59 LDGSRICGVRARVELSTGQRRGGG 82
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 31.1 bits (67), Expect = 0.71
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +2
Query: 335 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL-*VEMPFDKTKNQ 511
G+HT + + K +FVG +S + SD+ IR +E G + + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 512 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVK 613
GFC T + E + L + +G K++ VK
Sbjct: 88 GFGFCHFT-DLEGTLRALRILHEFHLGDKKLTVK 120
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 31.1 bits (67), Expect = 0.71
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +2
Query: 335 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL-*VEMPFDKTKNQ 511
G+HT + + K +FVG +S + SD+ IR +E G + + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 512 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVK 613
GFC T + E + L + +G K++ VK
Sbjct: 88 GFGFCHFT-DLEGTLRALRILHEFHLGDKKLTVK 120
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 31.1 bits (67), Expect = 0.71
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 368 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 472
PKK ++FVG L +E+ + E++ FS G I
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDI 142
>Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical
protein Y53C12A.3 protein.
Length = 557
Score = 30.3 bits (65), Expect = 1.2
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +2
Query: 62 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI 241
T+N + N GG + N P +L G + WE K+++D F +YG I+
Sbjct: 41 TENTRQRSNSNAGGSPDEQN----PQFGMQAQL--GKMMWEAGSKQVQDTFQSYGRIDLF 94
Query: 242 N--VKTDPNTGRSRGFAFIVFKAPESI 316
DP R+R + + P I
Sbjct: 95 RPYFDVDPAEVRTRLIRSFIPRKPSQI 121
>Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical
protein D1046.1 protein.
Length = 489
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +2
Query: 161 FVGGLSWETTDKELRDHFGAYGEIES--INVKTDPN--TGRSRGFAFIVFKAPESIDKVM 328
+VG L W TTD +L + G S ++K N G+S+G+A +V + ++ + M
Sbjct: 87 YVGNLLWYTTDADLLKALQSTGLARSQFADMKFFENRTNGQSKGYALLVLNSDAAVKQTM 146
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -2
Query: 247 YINTLYFTVCSKMITELLICGLPAQPTNKKFSVVIASWGLSTVMILRITATVL 89
Y NT TV +K + E + + PT K ++ SW +S V + + T L
Sbjct: 1864 YANTTVGTVAAKFLREAALL-MDTPPTTPKERLLQCSWAMSKVPFINMILTCL 1915
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 479 VEMPFDKTKNQRKGFCFITFESEQVVNDLLK-TPKRTIGGKEVDVKRA 619
+ + D+ KGF ++TFE+EQ +N + G + + V RA
Sbjct: 41 IHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRA 88
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 32 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 157
N++N + + +N NG NGG + N E+ G D + +
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEE 1364
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 32 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 157
N++N + + +N NG NGG + N E+ G D + +
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEE 1364
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/70 (24%), Positives = 36/70 (51%)
Frame = +2
Query: 395 KIFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 574
++++G L + SD ++ +FF +G + V M + GF F+ F+ ++ +D +
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADDAV-- 52
Query: 575 PKRTIGGKEV 604
+ GKE+
Sbjct: 53 --HDLNGKEL 60
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/41 (21%), Positives = 24/41 (58%)
Frame = +2
Query: 431 DDEIRNFFSEFGTIL*VEMPFDKTKNQRKGFCFITFESEQV 553
+ E+ +F +FG +L + + ++ KG+ ++ F+++ V
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAV 85
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +2
Query: 398 IFVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDK 499
++VG L S +++D I F++ G++ ++ FD+
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +2
Query: 155 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 334
+LF+ L + +L++ F + +I+ ++ PN S+ AFI F E A
Sbjct: 639 QLFINALPGTCNNTDLKNIFRSSTDIKILHASGQPN---SKKRAFITFGTVEDAQAAFAK 695
Query: 335 GEH-TINNKKVDPKKAKARHGKIFV 406
+NN VD A+ + K+ V
Sbjct: 696 SNGLKVNNHLVDVFYARHQETKVDV 720
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/111 (19%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = +2
Query: 221 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKI 400
+ + SI+ T+ + + E K+ E+ + ++ + K +H +
Sbjct: 54 FNRLASISKDTEKIANAVKNSGSGIISVSEDNQKIRRNEENPVPENSLEYWQ-KIKHRTV 112
Query: 401 FVGGLSSEISDDEIRNFFSEFGTIL*VEMPFDKTKNQR-KGFCFITFESEQ 550
++ G S++ D+I + ++FG V M K ++ KG FIT+++ +
Sbjct: 113 YMKGFSTDTQLDDIIQWANQFGETENVLMRRLKPGDRTFKGSVFITYKTRE 163
>Z69634-9|CAO82013.1| 575|Caenorhabditis elegans Hypothetical
protein B0001.3b protein.
Length = 575
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 53 DITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 151
D+ N+ N ++ + GGDS + E DDD
Sbjct: 416 DVAPGNRRNNSSSSAGGDSHLRGTVEFSSSDDD 448
>Z69634-8|CAA93452.4| 591|Caenorhabditis elegans Hypothetical
protein B0001.3a protein.
Length = 591
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 53 DITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 151
D+ N+ N ++ + GGDS + E DDD
Sbjct: 432 DVAPGNRRNNSSSSAGGDSHLRGTVEFSSSDDD 464
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 272 SRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 391
SRGF IVF A ++++V G H +N+ K K K H
Sbjct: 487 SRGFVEIVFCAITAMEQVKGYGTHLMNHCKDYMIKNKIYH 526
>L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical
protein R05D3.2 protein.
Length = 737
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -3
Query: 582 LLGVLSKSFTTCSDSNVMKQKPFLWFFVLSKGISTYKI 469
L+G L S+ ++ PF +FF+ S+G ST KI
Sbjct: 156 LIGALWNYVFVLSNVSLFVLLPFSYFFIESQGFSTSKI 193
>AF099920-4|AAK29844.2| 363|Caenorhabditis elegans Serpentine
receptor, class w protein95 protein.
Length = 363
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 111 CESPPPFSAFPLSWLSVVIS 52
CE P P S F + W++VVI+
Sbjct: 107 CEPPAPLSFFYMYWINVVIN 126
>AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical
protein K03E5.3 protein.
Length = 368
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 249 RQIQTQADHEGLPSLCLR 302
+ I+T D EG+PS CLR
Sbjct: 74 KMIRTDRDEEGIPSTCLR 91
>AC024746-7|AAF60403.1| 246|Caenorhabditis elegans Hypothetical
protein Y110A2AL.5 protein.
Length = 246
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -2
Query: 190 CGLPAQPTNKKFSVVIASWGLSTVMILRITATVLCISIKLVVGG 59
C P QP + S+V+ W + + R A CI L + G
Sbjct: 143 CPAPGQPFRRTESLVVCIWTFNETVATREEAKTFCIGKGLKLTG 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,886,720
Number of Sequences: 27780
Number of extensions: 344196
Number of successful extensions: 1378
Number of sequences better than 10.0: 132
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1308
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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