Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2084
         (650 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC028375-1|AAH28375.1| 1154|Homo sapiens PDZ domain containing 8...    37   0.054
AL391988-1|CAH70347.1| 1154|Homo sapiens novel protein protein.        37   0.054
AL359836-1|CAH73253.1| 1154|Homo sapiens novel protein protein.        37   0.054
BC139755-1|AAI39756.1|  793|Homo sapiens SLCO5A1 protein protein.      30   8.2  
AF205075-1|AAG42207.1|  848|Homo sapiens organic anion transport...    30   8.2  

>BC028375-1|AAH28375.1| 1154|Homo sapiens PDZ domain containing 8
           protein.
          Length = 1154

 Score = 37.1 bits (82), Expect = 0.054
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
 Frame = +3

Query: 414 LNAMLQFIFQQ--STADTR-WLRRRMATELAELLAKTSSGKIFESLTLRSL 557
           LNA + F+F++   TA TR W+ +++  E  ELL   ++G++ E L+LR +
Sbjct: 98  LNATILFLFRELRDTALTRRWVTKKIKVEFEELLQTKTAGRLLEGLSLRDV 148


>AL391988-1|CAH70347.1| 1154|Homo sapiens novel protein protein.
          Length = 1154

 Score = 37.1 bits (82), Expect = 0.054
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
 Frame = +3

Query: 414 LNAMLQFIFQQ--STADTR-WLRRRMATELAELLAKTSSGKIFESLTLRSL 557
           LNA + F+F++   TA TR W+ +++  E  ELL   ++G++ E L+LR +
Sbjct: 98  LNATILFLFRELRDTALTRRWVTKKIKVEFEELLQTKTAGRLLEGLSLRDV 148


>AL359836-1|CAH73253.1| 1154|Homo sapiens novel protein protein.
          Length = 1154

 Score = 37.1 bits (82), Expect = 0.054
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
 Frame = +3

Query: 414 LNAMLQFIFQQ--STADTR-WLRRRMATELAELLAKTSSGKIFESLTLRSL 557
           LNA + F+F++   TA TR W+ +++  E  ELL   ++G++ E L+LR +
Sbjct: 98  LNATILFLFRELRDTALTRRWVTKKIKVEFEELLQTKTAGRLLEGLSLRDV 148


>BC139755-1|AAI39756.1|  793|Homo sapiens SLCO5A1 protein protein.
          Length = 793

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 13/49 (26%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
 Frame = +1

Query: 211 CRTGLGCCFRRYSELC----LR*LFHCYFSCITYGRLKRELKNWTNLTC 345
           C    GC    Y  +C    +     C   C+  G L   ++N+T  TC
Sbjct: 500 CNVNCGCKIHEYEPVCGSDGITYFNPCLAGCVNSGNLSTGIRNYTECTC 548


>AF205075-1|AAG42207.1|  848|Homo sapiens organic anion transporter
           polypeptide-related protein 4 protein.
          Length = 848

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 13/49 (26%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
 Frame = +1

Query: 211 CRTGLGCCFRRYSELC----LR*LFHCYFSCITYGRLKRELKNWTNLTC 345
           C    GC    Y  +C    +     C   C+  G L   ++N+T  TC
Sbjct: 555 CNVNCGCKIHEYEPVCGSDGITYFNPCLAGCVNSGNLSTGIRNYTECTC 603


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,204,549
Number of Sequences: 237096
Number of extensions: 1954105
Number of successful extensions: 3738
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3726
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)