Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2084
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118553-1|AAM49922.1| 1037|Drosophila melanogaster LD34222p pro...    44   1e-04
AE014298-1719|AAF48119.1| 1037|Drosophila melanogaster CG10362-P...    44   1e-04
AE014134-1686|AAF52804.1|  526|Drosophila melanogaster CG4105-PA...    32   0.59 

>AY118553-1|AAM49922.1| 1037|Drosophila melanogaster LD34222p
           protein.
          Length = 1037

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 19/52 (36%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
 Frame = +3

Query: 411 ALNAMLQFIFQQ---STADTRWLRRRMATELAELLAKTSSGKIFESLTLRSL 557
           +LN ++QF+F +   S    +W  R+++ EL EL++KT++GK+ + LT++ L
Sbjct: 95  SLNFVMQFLFHEFKNSNRVRKWFYRKLSIELDELISKTTTGKLLDKLTIKEL 146


>AE014298-1719|AAF48119.1| 1037|Drosophila melanogaster CG10362-PA
           protein.
          Length = 1037

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 19/52 (36%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
 Frame = +3

Query: 411 ALNAMLQFIFQQ---STADTRWLRRRMATELAELLAKTSSGKIFESLTLRSL 557
           +LN ++QF+F +   S    +W  R+++ EL EL++KT++GK+ + LT++ L
Sbjct: 95  SLNFVMQFLFHEFKNSNRVRKWFYRKLSIELDELISKTTTGKLLDKLTIKEL 146


>AE014134-1686|AAF52804.1|  526|Drosophila melanogaster CG4105-PA
           protein.
          Length = 526

 Score = 32.3 bits (70), Expect = 0.59
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +3

Query: 255 VSALTVPLLLLMYYVRPFEKRTQELDQFNMPVTLPL 362
           ++ L +PL+ L+Y+ R   +R Q L +FN P  +P+
Sbjct: 6   LALLVLPLITLVYFERKASQRRQLLKEFNGPTPVPI 41


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,426,851
Number of Sequences: 53049
Number of extensions: 578574
Number of successful extensions: 1879
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1879
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)