Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2083
(471 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 25 1.3
L11618-1|AAB04104.1| 301|Anopheles gambiae ADP/ATP carrier prot... 25 1.8
L11617-1|AAB04105.1| 301|Anopheles gambiae ADP/ATP carrier prot... 25 1.8
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 24 3.1
AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical prot... 24 3.1
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 23 4.1
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 23 4.1
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 23 4.1
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 23 5.4
AF395079-1|AAK97461.1| 371|Anopheles gambiae basic helix-loop-h... 22 9.4
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 25.0 bits (52), Expect = 1.3
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Frame = +3
Query: 249 RGPVGRPDAPARSAED----RSAYRRTPAAPGV-APHDKKADVGPGSADLEFKGGYGR 407
+GP G P AP R D + APGV +K D+G D KG GR
Sbjct: 166 KGPAGHPGAPGRPGVDGVKGLPGLKGDIGAPGVIGLPGQKGDMGQAGND-GLKGFQGR 222
Score = 24.2 bits (50), Expect = 2.3
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = +3
Query: 231 RTETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPG 371
R E GPVG P AP R P APG+ P K PG
Sbjct: 62 RGEKGNSGPVGPPGAPGRDG--------MPGAPGL-PGSKGVKGDPG 99
>L11618-1|AAB04104.1| 301|Anopheles gambiae ADP/ATP carrier protein
protein.
Length = 301
Score = 24.6 bits (51), Expect = 1.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 354 ADVGPGSADLEFKG 395
ADVGPG+ + EF G
Sbjct: 145 ADVGPGAGEREFNG 158
>L11617-1|AAB04105.1| 301|Anopheles gambiae ADP/ATP carrier protein
protein.
Length = 301
Score = 24.6 bits (51), Expect = 1.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 354 ADVGPGSADLEFKG 395
ADVGPG+ + EF G
Sbjct: 145 ADVGPGAGEREFNG 158
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 23.8 bits (49), Expect = 3.1
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 186 HLPPEIVPATLKRSVRTETVRRGPVGRPDAPARSAEDRSA 305
+LP I P L+ + RR +G D P S+ + SA
Sbjct: 455 YLPASINPVKLRETSTIRRQRRTALGNRDEPHSSSGNWSA 494
>AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical protein
protein.
Length = 765
Score = 23.8 bits (49), Expect = 3.1
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 186 HLPPEIVPATLKRSVRTETVRRGPVGRPDAPARSAEDRSA 305
+LP I P L+ + RR +G D P S+ + SA
Sbjct: 456 YLPASINPVKLRETSTIRRQRRTALGNRDEPHSSSGNWSA 495
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 23.4 bits (48), Expect = 4.1
Identities = 14/71 (19%), Positives = 37/71 (52%)
Frame = +3
Query: 9 GQKDYHAPNHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLH 188
G+++Y + +L+K + A+++ R Y+ + +W++T++ EY+ IF+
Sbjct: 1129 GEQEY---KNCDLDKNQRNCIEFALKAKPIRRYIPKHRIQYKVWWFVTSQPFEYM-IFVL 1184
Query: 189 LPPEIVPATLK 221
+ + ++K
Sbjct: 1185 IMINTITLSMK 1195
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 23.4 bits (48), Expect = 4.1
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +3
Query: 345 DKKADVGPGSADLEFKGGYGRGRP 416
DK + P S K GYG G P
Sbjct: 678 DKLLNTMPASPASSIKSGYGEGAP 701
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 23.4 bits (48), Expect = 4.1
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -1
Query: 402 HSLP*IQDQLSLDQHQPFYHEVQHQGQQEY 313
H LP Q Q +H P + H QQ+Y
Sbjct: 604 HYLPLQQQQQQQARHLPQQQAIHHIHQQQY 633
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
FGF-signaling promoter protein.
Length = 1197
Score = 23.0 bits (47), Expect = 5.4
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +3
Query: 3 HGGQKDYHAPNHTELEKIPNLQVIKA 80
H G ++ N T ++++PN KA
Sbjct: 165 HNGGREQMMKNETSIDEVPNAPAPKA 190
>AF395079-1|AAK97461.1| 371|Anopheles gambiae basic
helix-loop-helix transcriptionfactor ASH protein.
Length = 371
Score = 22.2 bits (45), Expect = 9.4
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -1
Query: 378 QLSLDQHQPFYHEVQHQGQQEY 313
Q QH H+ Q Q QQ+Y
Sbjct: 305 QQQQQQHHHHQHQPQQQHQQQY 326
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 435,022
Number of Sequences: 2352
Number of extensions: 7604
Number of successful extensions: 29
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41245467
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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