Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2074
(700 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF187730-1|AAG17032.1| 159|Drosophila melanogaster eukaryotic t... 266 2e-71
AF159443-1|AAF80375.1| 159|Drosophila melanogaster eukaryotic i... 264 6e-71
AY071396-1|AAL49018.1| 159|Drosophila melanogaster RE47768p pro... 261 6e-70
AE013599-3794|AAM68297.1| 159|Drosophila melanogaster CG3186-PB... 261 6e-70
AE013599-3793|AAF47151.1| 159|Drosophila melanogaster CG3186-PA... 261 6e-70
M28863-1|AAA62770.1| 543|Drosophila melanogaster seven-up prote... 29 6.1
AY129452-1|AAM76194.1| 543|Drosophila melanogaster RE08410p pro... 29 6.1
AE014297-1474|AAN13541.1| 746|Drosophila melanogaster CG11502-P... 29 6.1
AE014297-1473|AAF54773.1| 543|Drosophila melanogaster CG11502-P... 29 6.1
AE013599-378|ABI31063.1| 2017|Drosophila melanogaster CG17800-PH... 29 8.0
>AF187730-1|AAG17032.1| 159|Drosophila melanogaster eukaryotic
translation initiationfactor 5a protein.
Length = 159
Score = 266 bits (652), Expect = 2e-71
Identities = 122/156 (78%), Positives = 135/156 (86%)
Frame = +2
Query: 35 DTHFEHRKHSGASSTFPMQCSALRKNGFVMLKGRPCKXVEMSTSKTGKHGHAKVHLVGID 214
D HFE SGAS+T+PMQCSALRKNGFVMLK RPCK VEMSTSKTGKHGHAKVH+VGID
Sbjct: 5 DDHFE-TTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGID 63
Query: 215 IFNGKKYEDICPSTHNMDVPHVXREXYQLTDIXDDGYLTLMADNGDLREDLKIPDGDLGT 394
IF+ KKYEDICPSTHNMDVP+V RE QL I DD +LTLM D+GDLREDLK+P+G+LG
Sbjct: 64 IFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTDSGDLREDLKVPEGELGE 123
Query: 395 QLRTDFDSGKEXXCTVLKSCGEECVIAVKANTALDK 502
QLR DFDSGK+ CTVLK+CGEECVIA+K NTALDK
Sbjct: 124 QLRLDFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159
>AF159443-1|AAF80375.1| 159|Drosophila melanogaster eukaryotic
initiation factor 5A protein.
Length = 159
Score = 264 bits (648), Expect = 6e-71
Identities = 121/156 (77%), Positives = 135/156 (86%)
Frame = +2
Query: 35 DTHFEHRKHSGASSTFPMQCSALRKNGFVMLKGRPCKXVEMSTSKTGKHGHAKVHLVGID 214
D HFE SGAS+T+PMQCSALRKNGFVMLK RPCK VEMSTSKTGKHGHAKVH+VGID
Sbjct: 5 DDHFE-TTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGID 63
Query: 215 IFNGKKYEDICPSTHNMDVPHVXREXYQLTDIXDDGYLTLMADNGDLREDLKIPDGDLGT 394
IF+ KKYEDICPSTHNMDVP+V RE QL I DD +LTLM ++GDLREDLK+P+G+LG
Sbjct: 64 IFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGE 123
Query: 395 QLRTDFDSGKEXXCTVLKSCGEECVIAVKANTALDK 502
QLR DFDSGK+ CTVLK+CGEECVIA+K NTALDK
Sbjct: 124 QLRLDFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159
>AY071396-1|AAL49018.1| 159|Drosophila melanogaster RE47768p
protein.
Length = 159
Score = 261 bits (640), Expect = 6e-70
Identities = 120/156 (76%), Positives = 134/156 (85%)
Frame = +2
Query: 35 DTHFEHRKHSGASSTFPMQCSALRKNGFVMLKGRPCKXVEMSTSKTGKHGHAKVHLVGID 214
D FE SGAS+T+PMQCSALRKNGFVMLK RPCK VEMSTSKTGKHGHAKVH+VGID
Sbjct: 5 DDQFE-TTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGID 63
Query: 215 IFNGKKYEDICPSTHNMDVPHVXREXYQLTDIXDDGYLTLMADNGDLREDLKIPDGDLGT 394
IF+ KKYEDICPSTHNMDVP+V RE QL I DD +LTLM ++GDLREDLK+P+G+LG
Sbjct: 64 IFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGE 123
Query: 395 QLRTDFDSGKEXXCTVLKSCGEECVIAVKANTALDK 502
QLR DFDSGK+ CTVLK+CGEECVIA+K NTALDK
Sbjct: 124 QLRLDFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159
>AE013599-3794|AAM68297.1| 159|Drosophila melanogaster CG3186-PB,
isoform B protein.
Length = 159
Score = 261 bits (640), Expect = 6e-70
Identities = 120/156 (76%), Positives = 134/156 (85%)
Frame = +2
Query: 35 DTHFEHRKHSGASSTFPMQCSALRKNGFVMLKGRPCKXVEMSTSKTGKHGHAKVHLVGID 214
D FE SGAS+T+PMQCSALRKNGFVMLK RPCK VEMSTSKTGKHGHAKVH+VGID
Sbjct: 5 DDQFE-TTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGID 63
Query: 215 IFNGKKYEDICPSTHNMDVPHVXREXYQLTDIXDDGYLTLMADNGDLREDLKIPDGDLGT 394
IF+ KKYEDICPSTHNMDVP+V RE QL I DD +LTLM ++GDLREDLK+P+G+LG
Sbjct: 64 IFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGE 123
Query: 395 QLRTDFDSGKEXXCTVLKSCGEECVIAVKANTALDK 502
QLR DFDSGK+ CTVLK+CGEECVIA+K NTALDK
Sbjct: 124 QLRLDFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159
>AE013599-3793|AAF47151.1| 159|Drosophila melanogaster CG3186-PA,
isoform A protein.
Length = 159
Score = 261 bits (640), Expect = 6e-70
Identities = 120/156 (76%), Positives = 134/156 (85%)
Frame = +2
Query: 35 DTHFEHRKHSGASSTFPMQCSALRKNGFVMLKGRPCKXVEMSTSKTGKHGHAKVHLVGID 214
D FE SGAS+T+PMQCSALRKNGFVMLK RPCK VEMSTSKTGKHGHAKVH+VGID
Sbjct: 5 DDQFE-TTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGID 63
Query: 215 IFNGKKYEDICPSTHNMDVPHVXREXYQLTDIXDDGYLTLMADNGDLREDLKIPDGDLGT 394
IF+ KKYEDICPSTHNMDVP+V RE QL I DD +LTLM ++GDLREDLK+P+G+LG
Sbjct: 64 IFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGE 123
Query: 395 QLRTDFDSGKEXXCTVLKSCGEECVIAVKANTALDK 502
QLR DFDSGK+ CTVLK+CGEECVIA+K NTALDK
Sbjct: 124 QLRLDFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159
>M28863-1|AAA62770.1| 543|Drosophila melanogaster seven-up protein
type 1 protein.
Length = 543
Score = 29.1 bits (62), Expect = 6.1
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 162 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTW 266
+P+P+S A L +GL +SM + VPPH+ W
Sbjct: 13 NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAW 43
>AY129452-1|AAM76194.1| 543|Drosophila melanogaster RE08410p
protein.
Length = 543
Score = 29.1 bits (62), Expect = 6.1
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 162 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTW 266
+P+P+S A L +GL +SM + VPPH+ W
Sbjct: 13 NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAW 43
>AE014297-1474|AAN13541.1| 746|Drosophila melanogaster CG11502-PA,
isoform A protein.
Length = 746
Score = 29.1 bits (62), Expect = 6.1
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 162 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTW 266
+P+P+S A L +GL +SM + VPPH+ W
Sbjct: 13 NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAW 43
>AE014297-1473|AAF54773.1| 543|Drosophila melanogaster CG11502-PB,
isoform B protein.
Length = 543
Score = 29.1 bits (62), Expect = 6.1
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 162 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTW 266
+P+P+S A L +GL +SM + VPPH+ W
Sbjct: 13 NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAW 43
>AE013599-378|ABI31063.1| 2017|Drosophila melanogaster CG17800-PH,
isoform H protein.
Length = 2017
Score = 28.7 bits (61), Expect = 8.0
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +2
Query: 434 CTVLKSCGEECVIAVKANTALDK*TNSAFIGLTNXXFFTINNSYINVKHNIVYKCNLKNE 613
CTV+K + V N L+ IG + T+N YI +H VY C +N+
Sbjct: 641 CTVIKGDLPINITWVLNNHTLNSGDLDVVIGRMSSKSSTLNIDYIAAEHRGVYTCLARNQ 700
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,099,161
Number of Sequences: 53049
Number of extensions: 506870
Number of successful extensions: 1243
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1243
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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