Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2074
         (700 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-1|CAA90247.1|  161|Caenorhabditis elegans Hypothetical pr...   179   2e-45
Z27079-13|CAA81597.2|  195|Caenorhabditis elegans Hypothetical p...   176   1e-44
CU457743-2|CAM36365.1|  695|Caenorhabditis elegans Hypothetical ...    30   1.4  
Z70310-6|CAE17904.1|  293|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z74031-2|CAA98454.2|  568|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>Z49967-1|CAA90247.1|  161|Caenorhabditis elegans Hypothetical
           protein F54C9.1 protein.
          Length = 161

 Score =  179 bits (436), Expect = 2e-45
 Identities = 89/155 (57%), Positives = 111/155 (71%), Gaps = 2/155 (1%)
 Frame = +2

Query: 32  EDTHFEHRKHSGASSTFPMQCSALRKNGFVMLKGRPCKXVEMSTSKTGKHGHAKVHLVGI 211
           +D HF H   SGA++TFP QCSALRKN  VM+KGRPCK VEMSTSKTGKHGHAKVH+V I
Sbjct: 7   DDEHF-HTGDSGAAATFPKQCSALRKNEHVMIKGRPCKIVEMSTSKTGKHGHAKVHMVAI 65

Query: 212 DIFNGKKYEDICPSTHNMDVPHVXREXYQLTDIXDDGYLTLM-ADNGDLREDLKIPDGDL 388
           DIF  KK EDICPSTHNMDVP V R  Y L  I DDGY +LM  ++ + ++DLK+PD +L
Sbjct: 66  DIFTSKKLEDICPSTHNMDVPVVKRREYLLMAI-DDGYCSLMDPESCEQKDDLKLPDTEL 124

Query: 389 GTQLRTDFDSGK-EXXCTVLKSCGEECVIAVKANT 490
           G Q+R  ++  +      V+ + GEE ++  K +T
Sbjct: 125 GQQIRDAYEKDEGSVLVQVVSAIGEEAILGWKVST 159


>Z27079-13|CAA81597.2|  195|Caenorhabditis elegans Hypothetical
           protein T05G5.10 protein.
          Length = 195

 Score =  176 bits (429), Expect = 1e-44
 Identities = 88/158 (55%), Positives = 112/158 (70%), Gaps = 5/158 (3%)
 Frame = +2

Query: 32  EDTHFEHR---KHSGASSTFPMQCSALRKNGFVMLKGRPCKXVEMSTSKTGKHGHAKVHL 202
           ED H E +     SGA++TFP QCSALRKN  VM++GRPCK VEMSTSKTGKHGHAKVH+
Sbjct: 37  EDHHDEEQFDSAESGAAATFPKQCSALRKNEHVMIRGRPCKIVEMSTSKTGKHGHAKVHM 96

Query: 203 VGIDIFNGKKYEDICPSTHNMDVPHVXREXYQLTDIXDDGYLTLM-ADNGDLREDLKIPD 379
           V IDIF  KK EDICPSTHNMDVP V R  Y L  I +DG+ +LM  ++ +L++DLK+P+
Sbjct: 97  VAIDIFTTKKLEDICPSTHNMDVPVVKRREYILMSI-EDGFCSLMDPESCELKDDLKMPE 155

Query: 380 GDLGTQLRTDFDSGK-EXXCTVLKSCGEECVIAVKANT 490
           GDLG  +R   +  +      V+ +CGEE ++  K +T
Sbjct: 156 GDLGNTIREALEKDEGSVLVQVVAACGEEAILGYKIST 193


>CU457743-2|CAM36365.1|  695|Caenorhabditis elegans Hypothetical
           protein K09E10.2 protein.
          Length = 695

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
 Frame = +2

Query: 260 NMDVPHVXREXYQLTDIX--DDGYLTLMADNGDLREDLKIPDGDLGTQLRTD-FDSGKEX 430
           N  +P + ++ Y L      + GY+  +   GDL+   KI D      LR D ++ G+  
Sbjct: 573 NKFIPFIKKKLYILDSFPRANSGYIARVP--GDLKNGKKIEDISKA-MLRPDGYERGRLR 629

Query: 431 XCTVLKSCGEEC 466
              ++K CG++C
Sbjct: 630 HAALVKECGDKC 641


>Z70310-6|CAE17904.1|  293|Caenorhabditis elegans Hypothetical
           protein R11A8.8 protein.
          Length = 293

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +2

Query: 320 GYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKEXXC 436
           GYL      GD ++++K+ +G    Q+ +D D  K   C
Sbjct: 251 GYLPQQPKKGDKKKNIKLKEGRTEHQIVSDIDPAKLRAC 289


>Z74031-2|CAA98454.2|  568|Caenorhabditis elegans Hypothetical
           protein F32D8.2 protein.
          Length = 568

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
 Frame = +2

Query: 215 IFNGKKYEDICPSTHNMDVPHVXR------EXYQLTDIXDDGYLTLMADN-GDLREDLK 370
           IF   + ED+   T +    H+ R      E  +  D+  DGYLTL + N  DL  D++
Sbjct: 74  IFFPNEDEDVFGLTPDKSKQHIVRGECKINELNEKVDLSSDGYLTLRSKNTNDLPSDIR 132


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,811,200
Number of Sequences: 27780
Number of extensions: 257865
Number of successful extensions: 655
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)