Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2071
         (550 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB001420-1|BAA20134.1|  714|Drosophila melanogaster neurospecifi...    28   7.2  
AY060246-1|AAL25285.1|  136|Drosophila melanogaster GH06646p pro...    28   9.6  

>AB001420-1|BAA20134.1|  714|Drosophila melanogaster neurospecific
           receptor tyrosinekinase protein.
          Length = 714

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -2

Query: 282 VWSXVRICWQRAHSGHGLWSRALTASNAALYNGSAR 175
           V++ +R CW R  S    ++R+ TAS+ A    SAR
Sbjct: 670 VYALMRRCWNRKPSERPGFARSTTASSTASPRASAR 705


>AY060246-1|AAL25285.1|  136|Drosophila melanogaster GH06646p
          protein.
          Length = 136

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +3

Query: 21 CNILCIHSYFSKRISV 68
          CNILC HS+F++ + V
Sbjct: 23 CNILCAHSFFARSVVV 38


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,566,924
Number of Sequences: 53049
Number of extensions: 367658
Number of successful extensions: 1274
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)