Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2068
         (750 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK096922-1|BAC04897.1|  203|Homo sapiens protein ( Homo sapiens ...    86   1e-16
BC014976-1|AAH14976.1|  204|Homo sapiens within bgcn homolog (Dr...    79   2e-14
BC006135-1|AAH06135.1|  204|Homo sapiens within bgcn homolog (Dr...    79   2e-14
AJ459406-1|CAD30677.1|  204|Homo sapiens PYM protein protein.          79   2e-14

>AK096922-1|BAC04897.1|  203|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39603 fis, clone SKNSH2005120, weakly similar to
           Drosophila melanogaster WIBG (wibg) mRNA. ).
          Length = 203

 Score = 86.2 bits (204), Expect = 1e-16
 Identities = 42/71 (59%), Positives = 51/71 (71%)
 Frame = +2

Query: 128 MSTPTAYEHDADGSKFIPATQRPDGTWRKPRRIKEGYVPQEEVPLYESKGKQFRARQNDG 307
           M+TP  Y  D  G K+I +TQRPDGTWRK RR+KEGYVPQEEVP+YE+K  +F  +    
Sbjct: 1   MATP--YVTDETGGKYIASTQRPDGTWRKQRRVKEGYVPQEEVPVYENKYVKF-FKSKPE 57

Query: 308 LPVGLTPEIVA 340
           LP GL+PE  A
Sbjct: 58  LPPGLSPEATA 68


>BC014976-1|AAH14976.1|  204|Homo sapiens within bgcn homolog
           (Drosophila) protein.
          Length = 204

 Score = 79.0 bits (186), Expect = 2e-14
 Identities = 36/57 (63%), Positives = 44/57 (77%)
 Frame = +2

Query: 170 KFIPATQRPDGTWRKPRRIKEGYVPQEEVPLYESKGKQFRARQNDGLPVGLTPEIVA 340
           K+I +TQRPDGTWRK RR+KEGYVPQEEVP+YE+K  +F  +    LP GL+PE  A
Sbjct: 14  KYIASTQRPDGTWRKQRRVKEGYVPQEEVPVYENKYVKF-FKSKPELPPGLSPEATA 69


>BC006135-1|AAH06135.1|  204|Homo sapiens within bgcn homolog
           (Drosophila) protein.
          Length = 204

 Score = 79.0 bits (186), Expect = 2e-14
 Identities = 36/57 (63%), Positives = 44/57 (77%)
 Frame = +2

Query: 170 KFIPATQRPDGTWRKPRRIKEGYVPQEEVPLYESKGKQFRARQNDGLPVGLTPEIVA 340
           K+I +TQRPDGTWRK RR+KEGYVPQEEVP+YE+K  +F  +    LP GL+PE  A
Sbjct: 14  KYIASTQRPDGTWRKQRRVKEGYVPQEEVPVYENKYVKF-FKSKPELPPGLSPEATA 69


>AJ459406-1|CAD30677.1|  204|Homo sapiens PYM protein protein.
          Length = 204

 Score = 79.0 bits (186), Expect = 2e-14
 Identities = 36/57 (63%), Positives = 44/57 (77%)
 Frame = +2

Query: 170 KFIPATQRPDGTWRKPRRIKEGYVPQEEVPLYESKGKQFRARQNDGLPVGLTPEIVA 340
           K+I +TQRPDGTWRK RR+KEGYVPQEEVP+YE+K  +F  +    LP GL+PE  A
Sbjct: 14  KYIASTQRPDGTWRKQRRVKEGYVPQEEVPVYENKYVKF-FKSKPELPPGLSPEATA 69


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,828,881
Number of Sequences: 237096
Number of extensions: 1531502
Number of successful extensions: 2764
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2764
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)