Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2065
         (710 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    81   4e-17
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    28   0.25 
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   2.3  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    25   3.1  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   7.2  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 80.6 bits (190), Expect = 4e-17
 Identities = 44/123 (35%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
 Frame = +2

Query: 347 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 526
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ    PI ++G++L+  AQT
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQT 220

Query: 527 GSGKTLAYILPAIVH-INNQPPIR-RGDGPIALVLAPTXKLAQQIQQVAADFGHTSYVRN 700
           GSGKT A++LP I H ++ +  +  R   P  +++APT +LA QI      F H + ++ 
Sbjct: 221 GSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLK- 279

Query: 701 TCV 709
            CV
Sbjct: 280 VCV 282


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 28.3 bits (60), Expect = 0.25
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +2

Query: 482 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 607
           P+A + K L   AQ  + ++   I  A+V +  Q  +RR DG
Sbjct: 451 PVASNYKTLNYKAQKAAARSHVKIFKALVRLRKQRTLRRNDG 492


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 6/38 (15%)
 Frame = -1

Query: 221 ALQRILFSHQSLQILQ------IYCHRCQTETNYRRIC 126
           A +R+  SHQS  IL+      I CHRC+   + +R C
Sbjct: 180 AQKRMEKSHQSESILRVGPEKKITCHRCRKPGHMKRDC 217


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -2

Query: 148 RRIIAEFVASSKFGTTVSTAIIPVTRHDYFSDLVEDVYLNYGFF 17
           RR+ A+  A ++F          ++   YF D+V DV L Y  +
Sbjct: 59  RRVRAKSKAMTEFLPLCDVLFNVISLAGYFCDVVFDVVLGYALY 102


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 299 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQY 391
           V++R P  V+  +  H+V    V VH P+ +
Sbjct: 139 VVRREPSAVKIAQPVHKVIAQPVHVHAPVAH 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,767
Number of Sequences: 2352
Number of extensions: 15262
Number of successful extensions: 33
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)