Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2065
(710 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 149 1e-36
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 128 3e-30
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 119 2e-27
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 116 1e-26
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 93 2e-19
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 87 9e-18
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 87 9e-18
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 87 9e-18
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 86 2e-17
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 75 4e-14
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 70 1e-12
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 70 1e-12
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 70 1e-12
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 70 2e-12
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 70 2e-12
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 66 2e-11
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 66 2e-11
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 66 3e-11
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 65 5e-11
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 65 5e-11
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 65 5e-11
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 60 2e-09
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 60 2e-09
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 59 3e-09
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 59 3e-09
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 58 6e-09
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 56 3e-08
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 56 3e-08
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 54 8e-08
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 54 1e-07
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 54 1e-07
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 52 4e-07
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 52 4e-07
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 52 4e-07
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 51 9e-07
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 48 5e-06
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 44 1e-04
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 40 0.002
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 38 0.009
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 35 0.066
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 33 0.20
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 33 0.27
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 32 0.35
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 32 0.47
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 31 0.61
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 31 1.1
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 31 1.1
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 2.5
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 29 2.5
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 29 2.5
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.3
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 3.3
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 3.3
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 7.6
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 149 bits (362), Expect = 1e-36
Identities = 68/161 (42%), Positives = 109/161 (67%)
Frame = +2
Query: 227 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN 406
+R DW + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA
Sbjct: 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAP 136
Query: 407 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 586
P + + + +++PT IQ+ WPIAMSG++++ +A+TGSGKTLA++LPA+VHI Q
Sbjct: 137 LPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQA 195
Query: 587 PIRRGDGPIALVLAPTXKLAQQIQQVAADFGHTSYVRNTCV 709
+RG+GP LVL PT +LAQQ+Q+V+ DF H+ ++ TC+
Sbjct: 196 HRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCL 236
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 128 bits (310), Expect = 3e-30
Identities = 58/156 (37%), Positives = 94/156 (60%)
Frame = +2
Query: 239 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 418
D + Q FNKNFY+ H + + +V +N + V G++ P+ F +F
Sbjct: 216 DHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKL 275
Query: 419 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 598
+ + ++ Y++PTPIQA P A+SG++++G+A+TGSGKT AY+ PAIVHI +QP ++
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKA 335
Query: 599 GDGPIALVLAPTXKLAQQIQQVAADFGHTSYVRNTC 706
G+GP+A+++ PT +LA Q+ Q A F + C
Sbjct: 336 GEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPIC 371
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 119 bits (286), Expect = 2e-27
Identities = 60/161 (37%), Positives = 94/161 (58%), Gaps = 1/161 (0%)
Frame = +2
Query: 227 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEA 403
+ + D V + F KNFY + + + EV+ YR + + +TV G++ PI+ + +
Sbjct: 250 LAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQC 309
Query: 404 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ 583
+ +K Y +PT IQAQ P MSG++++G+A+TGSGKTLA++LP HI +Q
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQ 369
Query: 584 PPIRRGDGPIALVLAPTXKLAQQIQQVAADFGHTSYVRNTC 706
P + GDGPIA++LAPT +LA Q + A F ++ C
Sbjct: 370 PELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVAC 410
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 116 bits (280), Expect = 1e-26
Identities = 55/130 (42%), Positives = 83/130 (63%), Gaps = 4/130 (3%)
Frame = +2
Query: 332 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 511
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 512 GVAQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTXKLAQQIQQVAADFG 679
GVA+TGSGKT A++LP +V I + P + R + GP A+++APT +LAQQI++ FG
Sbjct: 343 GVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFG 402
Query: 680 HTSYVRNTCV 709
++ V
Sbjct: 403 KLLGIKTVSV 412
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 93.1 bits (221), Expect = 2e-19
Identities = 48/124 (38%), Positives = 80/124 (64%), Gaps = 7/124 (5%)
Frame = +2
Query: 359 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSG 535
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +SG++ +GV+QTGSG
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSG 133
Query: 536 KTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTXKLAQQIQQVAADFGHTSYVR 697
KTLA++LPA++HI+ Q + D P LVL+PT +LAQQI+ + + Y +
Sbjct: 134 KTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGY-K 192
Query: 698 NTCV 709
+ C+
Sbjct: 193 SVCL 196
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 87.4 bits (207), Expect = 9e-18
Identities = 54/134 (40%), Positives = 75/134 (55%), Gaps = 10/134 (7%)
Frame = +2
Query: 326 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 505
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
Query: 506 LVGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTXKLAQQI 655
L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PT +LA QI
Sbjct: 179 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 238
Query: 656 QQVAADFGHTSYVR 697
+ A F + S ++
Sbjct: 239 HKEATKFSYKSNIQ 252
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 87.4 bits (207), Expect = 9e-18
Identities = 54/134 (40%), Positives = 75/134 (55%), Gaps = 10/134 (7%)
Frame = +2
Query: 326 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 505
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
Query: 506 LVGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTXKLAQQI 655
L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PT +LA QI
Sbjct: 163 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 222
Query: 656 QQVAADFGHTSYVR 697
+ A F + S ++
Sbjct: 223 HKEATKFSYKSNIQ 236
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 87.4 bits (207), Expect = 9e-18
Identities = 54/134 (40%), Positives = 75/134 (55%), Gaps = 10/134 (7%)
Frame = +2
Query: 326 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 505
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
Query: 506 LVGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTXKLAQQI 655
L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PT +LA QI
Sbjct: 160 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 219
Query: 656 QQVAADFGHTSYVR 697
+ A F + S ++
Sbjct: 220 HKEATKFSYKSNIQ 233
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 86.2 bits (204), Expect = 2e-17
Identities = 44/127 (34%), Positives = 73/127 (57%), Gaps = 4/127 (3%)
Frame = +2
Query: 287 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 463
P + ++S + E R + ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 464 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPT 634
IQ QG P+A+SG++++G+A TGSGKT+ ++LP ++ Q P R +GP L++ P+
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPS 275
Query: 635 XKLAQQI 655
+LA+QI
Sbjct: 276 RELARQI 282
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 75.4 bits (177), Expect = 4e-14
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 11/122 (9%)
Frame = +2
Query: 350 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 529
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L+ AQTG
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 530 SGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTXKLAQQIQQVAADF 676
SGKT A+++P + I P R+ P ALVL+PT +L+ QI + F
Sbjct: 214 SGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKF 273
Query: 677 GH 682
+
Sbjct: 274 AY 275
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 70.1 bits (164), Expect = 1e-12
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 559
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 560 AIVHINNQPPIR-RGDG---PIALVLAPTXKLAQQIQQVAADFGH 682
+ + + + G+G P ++L PT +LA QI F +
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAY 443
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 70.1 bits (164), Expect = 1e-12
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 559
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 560 AIVHINNQPPIR-RGDG---PIALVLAPTXKLAQQIQQVAADFGH 682
+ + + + G+G P ++L PT +LA QI F +
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAY 443
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 70.1 bits (164), Expect = 1e-12
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 559
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 560 AIVHINNQPPIR-RGDG---PIALVLAPTXKLAQQIQQVAADFGH 682
+ + + + G+G P ++L PT +LA QI F +
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAY 443
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 559
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 560 AIVHINNQPPIRRG-DG---PIALVLAPTXKLAQQIQQVAADFGHTS 688
+ + + + G +G P ++L PT +LA QI F + S
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQS 402
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 559
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 560 AIVHINNQPPIRRG-DG---PIALVLAPTXKLAQQIQQVAADFGHTS 688
+ + + + G +G P ++L PT +LA QI F + S
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQS 402
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 66.1 bits (154), Expect = 2e-11
Identities = 34/112 (30%), Positives = 62/112 (55%)
Frame = +2
Query: 374 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYI 553
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 554 LPAIVHINNQPPIRRGDGPIALVLAPTXKLAQQIQQVAADFGHTSYVRNTCV 709
+P + + R G AL+++PT +LA Q +V + G + +R C+
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACL 127
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 66.1 bits (154), Expect = 2e-11
Identities = 34/112 (30%), Positives = 62/112 (55%)
Frame = +2
Query: 374 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYI 553
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 554 LPAIVHINNQPPIRRGDGPIALVLAPTXKLAQQIQQVAADFGHTSYVRNTCV 709
+P + + R G AL+++PT +LA Q +V + G + +R C+
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACL 127
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 65.7 bits (153), Expect = 3e-11
Identities = 34/91 (37%), Positives = 52/91 (57%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 571
FE+ N + + GY +PTPIQ P+A++GK++ A TG+GKT A++LP +
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 572 INNQPPIRRGDGPIALVLAPTXKLAQQIQQV 664
+ +P + LVL PT +LA Q+ QV
Sbjct: 210 MIYRP--KGASCTRVLVLVPTRELAIQVFQV 238
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 64.9 bits (151), Expect = 5e-11
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 571
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 572 INNQPPIR-RGDG---PIALVLAPTXKLAQQIQQVAADFGH 682
+ ++ + G+G P ++L PT +L QI F +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAY 654
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 64.9 bits (151), Expect = 5e-11
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 571
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 572 INNQPPIR-RGDG---PIALVLAPTXKLAQQIQQVAADFGH 682
+ ++ + G+G P ++L PT +L QI F +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAY 654
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 64.9 bits (151), Expect = 5e-11
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 571
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 572 INNQPPIR-RGDG---PIALVLAPTXKLAQQIQQVAADFGH 682
+ ++ + G+G P ++L PT +L QI F +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAY 654
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/90 (35%), Positives = 52/90 (57%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 571
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 572 INNQPPIRRGDGPIALVLAPTXKLAQQIQQ 661
++ P G AL+L PT +LA QI +
Sbjct: 151 LSVDP-----YGIYALILTPTRELAFQIAE 175
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/90 (35%), Positives = 52/90 (57%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 571
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 572 INNQPPIRRGDGPIALVLAPTXKLAQQIQQ 661
++ P G AL+L PT +LA QI +
Sbjct: 151 LSVDP-----YGIYALILTPTRELAFQIAE 175
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/99 (30%), Positives = 60/99 (60%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 562
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 563 IVHINNQPPIRRGDGPIALVLAPTXKLAQQIQQVAADFG 679
+ I+++ P + ALV+APT +LAQQIQ+V + G
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALG 121
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/99 (30%), Positives = 60/99 (60%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 562
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 563 IVHINNQPPIRRGDGPIALVLAPTXKLAQQIQQVAADFG 679
+ I+++ P + ALV+APT +LAQQIQ+V + G
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALG 121
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 58.0 bits (134), Expect = 6e-09
Identities = 32/91 (35%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Frame = +2
Query: 410 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI---- 574
P+ V + ++ MG+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESS 222
Query: 575 --NNQPPIRRGDGPIALVLAPTXKLAQQIQQ 661
+ + GP AL++APT +L QI +
Sbjct: 223 DDSQETESTEVRGPRALIVAPTRELVIQIMK 253
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 55.6 bits (128), Expect = 3e-08
Identities = 31/90 (34%), Positives = 49/90 (54%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 571
F E + + +G+ +P+ IQ P A+ GK+++G+A+TGSGKT A+ +P +
Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQS 105
Query: 572 INNQPPIRRGDGPIALVLAPTXKLAQQIQQ 661
+ + P LVL PT +LA QI Q
Sbjct: 106 LLDHP-----QAFFCLVLTPTRELAFQIGQ 130
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 55.6 bits (128), Expect = 3e-08
Identities = 31/112 (27%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Frame = +2
Query: 377 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYIL 556
N I F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + +
Sbjct: 23 NVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSI 82
Query: 557 PAIVHINNQPPIRRGDGPIALVLAPTXKLAQQIQQVAADFGHTSYVR-NTCV 709
+ ++ Q +R AL+L+PT +LA QIQ+V G V+ + C+
Sbjct: 83 SVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHACI 129
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/92 (28%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 571
F + + + + + +G+++ +Q +A+ KN++G A+TGSGKT A+++P +
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 572 INNQPPIRRGD-GPIALVLAPTXKLAQQIQQV 664
+ + G GP A+++APT +L QI ++
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQIYKL 182
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 54.4 bits (125), Expect = 8e-08
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Frame = +2
Query: 419 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI-----NNQ 583
+ + +K + Y IQ P + G +++G A+T +GKT A+ LP I I +
Sbjct: 392 ILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETR 451
Query: 584 PPIRRGDGPIALVLAPTXKLAQQIQQ 661
R+ DGP+AL+LAPT +LA QI +
Sbjct: 452 NKARQDDGPLALILAPTRELAAQIHE 477
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 54.0 bits (124), Expect = 1e-07
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Frame = +2
Query: 299 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQG 478
V KR +++ R + + G + N I F +++ + + ++P+PIQ Q
Sbjct: 97 VEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQS 156
Query: 479 WPIAMSGKNLVGVAQTGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTXKL 643
P +N++ A TGSGKTLA+ LP I+ + + + +A+VL PT +L
Sbjct: 157 IPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTREL 216
Query: 644 AQQ 652
A Q
Sbjct: 217 AAQ 219
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 54.0 bits (124), Expect = 1e-07
Identities = 30/110 (27%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 562
I F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISV 84
Query: 563 IVHINNQPPIRRGDGPIALVLAPTXKLAQQIQQVAADFGHTSYVR-NTCV 709
+ ++ Q +R AL+L+PT +LA QIQ+V G V+ + C+
Sbjct: 85 LQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHACI 129
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/82 (34%), Positives = 50/82 (60%)
Frame = +2
Query: 428 GVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 607
G+ G+++P+PIQ +A++G++++ A+ G+GKT AY +P I I QP ++
Sbjct: 57 GIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALKAIQ- 113
Query: 608 PIALVLAPTXKLAQQIQQVAAD 673
A+V+ PT +LA Q Q+ +
Sbjct: 114 --AMVIVPTRELALQTSQICVE 133
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Frame = +2
Query: 329 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 508
++ K + VE+ + + P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 509 VGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTXKLAQQ 652
V A TGSGKTLA+++P ++ + ++ P L++APT +L Q
Sbjct: 777 VACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/83 (32%), Positives = 53/83 (63%)
Frame = +2
Query: 425 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 604
+ V+ +G+ T IQA+ + GK+++ A+TGSGKTLA++LPAI + ++ ++ +
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHN 139
Query: 605 GPIALVLAPTXKLAQQIQQVAAD 673
G ++++PT +L+ Q V ++
Sbjct: 140 GTGVIIVSPTRELSMQTYGVLSE 162
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Frame = +2
Query: 329 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 508
++ K + VE+ + + P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 509 VGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTXKLAQQ 652
V A TGSGKTLA+++P ++ + ++ P L++APT +L Q
Sbjct: 777 VACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 50.8 bits (116), Expect = 9e-07
Identities = 28/76 (36%), Positives = 46/76 (60%)
Frame = +2
Query: 425 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 604
+G+K Y +PT IQ +++G ++VG A+TGSGKTLA ++P ++ +
Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLEALWRAKWSPDY 147
Query: 605 GPIALVLAPTXKLAQQ 652
G AL+++PT +LA Q
Sbjct: 148 GLGALIISPTRELALQ 163
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 50.4 bits (115), Expect = 1e-06
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 556
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 557 PAIVHINNQPPIRRGDGPIALVLAPTXKLAQQIQQVAADFG 679
+ I+ P + LAPT +LA+QI +V G
Sbjct: 268 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 303
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 50.4 bits (115), Expect = 1e-06
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 556
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 557 PAIVHINNQPPIRRGDGPIALVLAPTXKLAQQIQQVAADFG 679
+ I+ P + LAPT +LA+QI +V G
Sbjct: 293 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 328
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 50.4 bits (115), Expect = 1e-06
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 556
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 557 PAIVHINNQPPIRRGDGPIALVLAPTXKLAQQIQQVAADFG 679
+ I+ P + LAPT +LA+QI +V G
Sbjct: 677 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 712
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 48.4 bits (110), Expect = 5e-06
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
Frame = +2
Query: 446 YKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI------NNQPPIRRGD 604
+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + + + +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 605 GPIALVLAPTXKLAQQIQQ 661
GP AL++APT +L QI +
Sbjct: 68 GPRALIVAPTRELVIQIMK 86
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/90 (23%), Positives = 51/90 (56%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 571
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 572 INNQPPIRRGDGPIALVLAPTXKLAQQIQQ 661
+++ R +++ PT +++ QI++
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQIKE 108
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/90 (23%), Positives = 51/90 (56%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 571
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 572 INNQPPIRRGDGPIALVLAPTXKLAQQIQQ 661
+++ R +++ PT +++ QI++
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQIKE 108
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 41.9 bits (94), Expect = 4e-04
Identities = 31/98 (31%), Positives = 49/98 (50%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 562
++ F E P+ ++ V YK T +Q ++ ++V + TGSGKTLA++LP
Sbjct: 10 LKTFREKLGPELLE--VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPM 67
Query: 563 IVHINNQPPIRRGDGPIALVLAPTXKLAQQIQQVAADF 676
+ I N G AL+L+P+ +L QI V F
Sbjct: 68 MRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQPF 103
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 559
FEE + + ++ + PT +Q++ P + G + + A+TGSGKT A+ LP
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLP 59
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 37.5 bits (83), Expect = 0.009
Identities = 23/95 (24%), Positives = 46/95 (48%)
Frame = +2
Query: 425 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 604
+G+ G+++P+ IQ +GK++ +Q GSGKT+ ++ + I+ + +
Sbjct: 9 RGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQ-- 66
Query: 605 GPIALVLAPTXKLAQQIQQVAADFGHTSYVRNTCV 709
++LAP +AQ+ + G V TC+
Sbjct: 67 ---VILLAPQRGMAQRAHEQLKSLGRNLNVNATCL 98
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 34.7 bits (76), Expect = 0.066
Identities = 22/55 (40%), Positives = 28/55 (50%)
Frame = +2
Query: 488 AMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTXKLAQQ 652
A+ GKN V VA TGSGKT I A+ HI + +G ++L P L Q
Sbjct: 382 ALEGKNCVIVAPTGSGKTEVAIYAALKHIEER--TSQGKPSRVVLLVPKIPLVGQ 434
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 482 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTXKLAQQI 655
P + +++ A TGSGKT+ Y+LP + + ++P A++L P L QI
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQI 204
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 32.7 bits (71), Expect = 0.27
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 500 KNLVGVAQTGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTXKLAQQI 655
+ L+ A TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 130 RGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 32.3 bits (70), Expect = 0.35
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +2
Query: 464 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI--NNQPPIRRG--DGPIALVLAP 631
+Q + G+ LV A TG GKT A+++PAI N Q P L++A
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFESTKPSPSILIMAS 78
Query: 632 TXKLAQQI 655
T L Q+
Sbjct: 79 TSALVDQL 86
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 31.9 bits (69), Expect = 0.47
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 443 GYKEPTPIQAQGW-PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 586
G+K PIQ Q + + S +N++ A GSGKT L + H N P
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENTP 1366
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 464 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 565
+Q + G+ LV A TG GKT A+++PAI
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 152
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 461 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 568
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 89 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 124
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 461 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 568
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 112 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 147
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 93 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 209
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +2
Query: 485 IAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTXK-LAQQIQQ 661
+A+ GKN + A TGSGKT+ I I+ + + G AL + P L QQ
Sbjct: 303 VALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMTPNSMILNQQAAS 360
Query: 662 VAADFGHTSYVR 697
+++ H + +
Sbjct: 361 ISSYLDHVYHTQ 372
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +2
Query: 485 IAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTXK-LAQQIQQ 661
+A+ GKN + A TGSGKT+ I I+ + + G AL + P L QQ
Sbjct: 303 VALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMTPNSMILNQQAAS 360
Query: 662 VAADFGHTSYVR 697
+++ H + +
Sbjct: 361 ISSYLDHVYHTQ 372
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 524 TGSGKTLAYILPAIVH 571
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -2
Query: 505 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 326
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 325 D 323
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -2
Query: 505 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 326
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 325 D 323
+
Sbjct: 86 N 86
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 148 RRIIAEFVASSKFGTTVSTAIIPV 77
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 148 RRIIAEFVASSKFGTTVSTAIIPV 77
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 287 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 445
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 287 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 445
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,674,176
Number of Sequences: 27780
Number of extensions: 342788
Number of successful extensions: 1056
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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