Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2062
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 100 1e-21
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 100 1e-21
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 100 1e-21
AC024214-9|AAF36079.1| 790|Caenorhabditis elegans Calpain famil... 83 3e-16
AC024763-5|AAO12402.1| 716|Caenorhabditis elegans Calpain famil... 75 7e-14
AC024214-10|AAF36080.1| 778|Caenorhabditis elegans Calpain fami... 66 3e-11
AL132848-5|CAB60389.2| 702|Caenorhabditis elegans Hypothetical ... 64 1e-10
Z82277-1|CAB05248.1| 648|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U12921-1|AAB60256.1| 648|Caenorhabditis elegans sex determinati... 54 1e-07
AC024763-6|AAO12403.1| 603|Caenorhabditis elegans Calpain famil... 31 0.87
Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z48178-7|CAE48493.1| 212|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z48178-6|CAA88203.1| 212|Caenorhabditis elegans Hypothetical pr... 28 6.2
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 28 6.2
Z78018-2|CAB01447.1| 434|Caenorhabditis elegans Hypothetical pr... 28 8.1
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 100 bits (240), Expect = 1e-21
Identities = 66/230 (28%), Positives = 112/230 (48%), Gaps = 25/230 (10%)
Frame = +2
Query: 2 LIRLRRPLGHGETPISHIVLXTALWKTIPQYERXRLMIA---SKGVWMLFSDFQRLFPRI 172
++R+R P G+ + + W+++P + + + WM F DF R F ++
Sbjct: 500 ILRIRNPWGNEQEWNGPWSDNSREWRSVPDSVKQDMGLKFDHDGEFWMSFDDFMRNFEKM 559
Query: 173 EMVHLDTETSRAELSLSEKQK----WQMKMHQGGWKRGVSAGGCRNYVNFFHTNPQVQIM 340
E+ +L + ++ + W H G W R +AGGCRNY+N F NPQ ++
Sbjct: 560 EICNLGPDVMDEVYQMTGVKAAGMVWAANTHDGAWVRNQTAGGCRNYINTFANNPQFRVQ 619
Query: 341 LNEPD--------TVIISLNQ-------HSIMEPKVIGFSVYKMPKFLTETA--NQMFFK 469
L + D TVI ++ Q ++ IGF+VY M ++ FF
Sbjct: 620 LTDSDPDDDDELCTVIFAVLQKYRRNLKQDGLDNVPIGFAVYDMNNAGNNRGRLSKQFFA 679
Query: 470 RIKSTINS-QYTNSRQVSQRCQLESGAYLIMPTTFEPREEAQFTLXIYSN 616
KS + S + N R+++ R ++ G Y+++P+TFEP EEA+F L +Y+N
Sbjct: 680 ANKSAMRSAAFINLREMTGRFRVPPGNYVVVPSTFEPNEEAEFMLRVYTN 729
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 100 bits (239), Expect = 1e-21
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 22/227 (9%)
Frame = +2
Query: 2 LIRLRRPLGHGETPISHIVLXTALWKTIPQYERXRLMIA---SKGVWMLFSDFQRLFPRI 172
++R+R P G+ + + W+++P + + + WM F DF R F ++
Sbjct: 525 ILRIRNPWGNEQEWNGPWSDNSREWRSVPDSVKQDMGLKFDHDGEFWMSFDDFMRNFEKM 584
Query: 173 EMVHLDTETSRAELSLSEKQK----WQMKMHQGGWKRGVSAGGCRNYVNFFHTNPQVQIM 340
E+ +L + ++ + W H G W R +AGGCRNY+N F NPQ ++
Sbjct: 585 EICNLGPDVMDEVYQMTGVKAAGMVWAANTHDGAWVRNQTAGGCRNYINTFANNPQFRVQ 644
Query: 341 LNEPD--------TVIISLNQ-------HSIMEPKVIGFSVYKMPKFLTETANQMFFKRI 475
L + D TVI ++ Q ++ IGF+VY + Q F
Sbjct: 645 LTDSDPDDDDELCTVIFAVLQKYRRNLKQDGLDNVPIGFAVYDAGNNRGRLSKQFFAANK 704
Query: 476 KSTINSQYTNSRQVSQRCQLESGAYLIMPTTFEPREEAQFTLXIYSN 616
+ ++ + N R+++ R ++ G Y+++P+TFEP EEA+F L +Y+N
Sbjct: 705 SAMRSAAFINLREMTGRFRVPPGNYVVVPSTFEPNEEAEFMLRVYTN 751
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 100 bits (239), Expect = 1e-21
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 22/227 (9%)
Frame = +2
Query: 2 LIRLRRPLGHGETPISHIVLXTALWKTIPQYERXRLMIA---SKGVWMLFSDFQRLFPRI 172
++R+R P G+ + + W+++P + + + WM F DF R F ++
Sbjct: 546 ILRIRNPWGNEQEWNGPWSDNSREWRSVPDSVKQDMGLKFDHDGEFWMSFDDFMRNFEKM 605
Query: 173 EMVHLDTETSRAELSLSEKQK----WQMKMHQGGWKRGVSAGGCRNYVNFFHTNPQVQIM 340
E+ +L + ++ + W H G W R +AGGCRNY+N F NPQ ++
Sbjct: 606 EICNLGPDVMDEVYQMTGVKAAGMVWAANTHDGAWVRNQTAGGCRNYINTFANNPQFRVQ 665
Query: 341 LNEPD--------TVIISLNQ-------HSIMEPKVIGFSVYKMPKFLTETANQMFFKRI 475
L + D TVI ++ Q ++ IGF+VY + Q F
Sbjct: 666 LTDSDPDDDDELCTVIFAVLQKYRRNLKQDGLDNVPIGFAVYDAGNNRGRLSKQFFAANK 725
Query: 476 KSTINSQYTNSRQVSQRCQLESGAYLIMPTTFEPREEAQFTLXIYSN 616
+ ++ + N R+++ R ++ G Y+++P+TFEP EEA+F L +Y+N
Sbjct: 726 SAMRSAAFINLREMTGRFRVPPGNYVVVPSTFEPNEEAEFMLRVYTN 772
>AC024214-9|AAF36079.1| 790|Caenorhabditis elegans Calpain family
protein 6 protein.
Length = 790
Score = 82.6 bits (195), Expect = 3e-16
Identities = 67/230 (29%), Positives = 101/230 (43%), Gaps = 25/230 (10%)
Frame = +2
Query: 2 LIRLRRPLGHGETPISHIVLXTALWKTIPQYERXRLMIASKG---VWMLFSDFQRLFPRI 172
L+R+R P G E ++LW+ + Q +R ++ K WM DF F +
Sbjct: 388 LLRIRNPWGDTEWN-GDWSDKSSLWEQVDQEQREKMEFRIKEDGEFWMCLDDFMAQFANL 446
Query: 173 EMVHLDTE-----TSRAELSLSEKQ--KWQMKMHQGGW-KRGVSAGGCRNYVNFFHTNPQ 328
+ +L + T E+ + EKQ +W K G W R +AGGC N N F TNPQ
Sbjct: 447 DCCNLSADVMHEITEMTEIEVMEKQSKQWIQKSADGEWCSRKGTAGGCSNNENTFCTNPQ 506
Query: 329 VQIML-------NEPDTVIISLNQ-------HSIMEPKVIGFSVYKMPKFLTETANQMFF 466
+ N+ TVI ++ Q H ++ IG SVYKM + +M
Sbjct: 507 YETYFRATSPSSNDKCTVIAAVFQKYRRNQLHRGLDMLQIGLSVYKMSGPNEKVTAEMMK 566
Query: 467 KRIKSTINSQYTNSRQVSQRCQLESGAYLIMPTTFEPREEAQFTLXIYSN 616
+ + R+ R + G Y+I+P TFEP +A+F L +SN
Sbjct: 567 THAPIASTKLFVDYREAVVRFTVPPGYYVIVPCTFEPNHDAEFLLRTFSN 616
>AC024763-5|AAO12402.1| 716|Caenorhabditis elegans Calpain family
protein 4, isoform a protein.
Length = 716
Score = 74.5 bits (175), Expect = 7e-14
Identities = 67/247 (27%), Positives = 115/247 (46%), Gaps = 34/247 (13%)
Frame = +2
Query: 2 LIRLRRPLGHGETPISHIVLXTALWKTIPQYERXRLMI--ASKG-VWMLFSDFQRLFPRI 172
L+RLR P G+ + ++ W I + + ++ + A G WM F DF F ++
Sbjct: 471 LLRLRNPWGNEKEWNGAWSDGSSEWSKIDEATKKQIDVQFARDGEFWMSFEDFFSNFTQM 530
Query: 173 EMVHLDTE----------TSRAELSLSEKQKWQMKMHQGGW--KRGVSAGGCRNYVNFFH 316
E+ +L E +RA ++ E+ +W M G W K+G +AGGC N + +
Sbjct: 531 EVCNLTAEIFDEIAEMTGVNRATETVEEEHQWHEIMEDGEWSSKKG-TAGGCNNNPSTYP 589
Query: 317 TNPQVQIMLNEPD---------TVIISLNQHSIMEPKV-------IGFSVYKMPKFLTET 448
NPQ P TVI+++ Q E + IG S+Y + T
Sbjct: 590 KNPQFSTFFTAPQSSIEADGNVTVIVAVLQKYRRELRSKGKDVLPIGVSIYSLGAEGTAR 649
Query: 449 A--NQMFFKRIKSTINSQ-YTNSRQVSQRCQLESGAYLIMPTTFEPREEAQFTLXIYSNK 619
+ FF + + + + N+R+V+ R ++ G Y+I+P TF+ ++A+F L +Y+N
Sbjct: 650 SPLTAQFFSQNRPIARTTVFVNTREVTVRFRVPPGQYVIVPCTFDAYDDAEFLLRVYANG 709
Query: 620 PLKMKVL 640
LK +L
Sbjct: 710 TLKSSLL 716
>AC024214-10|AAF36080.1| 778|Caenorhabditis elegans Calpain family
protein 7 protein.
Length = 778
Score = 66.1 bits (154), Expect = 3e-11
Identities = 65/232 (28%), Positives = 107/232 (46%), Gaps = 27/232 (11%)
Frame = +2
Query: 2 LIRLRRPLGHGETPISHIVLXTALWKTIPQYERXRLMI--ASKG-VWMLFSDFQRLFPRI 172
L+R+R P G+ + ++ W + +R ++ + A G WM F DF F ++
Sbjct: 541 LLRIRNPWGNSKEWNGAWSDGSSEWSQVDPQQREQMGVQFAKDGEFWMSFDDFMTNFTQM 600
Query: 173 EMVHLD-------TETSRAELSLSEKQKWQMKMHQGGWK-RGVSAGGCRNYVNFFHTNPQ 328
E +L +E + E+ +K +W K G W R +AGGC+N + + NPQ
Sbjct: 601 ECCNLSADVMDEISEMTGVEVHDKQKHQWVEKSEDGEWNSRQGTAGGCQNNDTYCN-NPQ 659
Query: 329 V----QIMLNEPD-----TVIISLNQHSIMEPKV-------IGFSVYKMPKFLTETANQM 460
Q+ ++ + TVI ++ Q E + IGFSVYK +
Sbjct: 660 YGTYFQVPMDSVEHDGKCTVIGAVLQKYRRELRTKGLDNLPIGFSVYKADGSGQAIHDVS 719
Query: 461 FFKRIKSTINSQYTNSRQVSQRCQLESGAYLIMPTTFEPREEAQFTLXIYSN 616
K I T + N R+V+ R ++ G Y+I+P TF+ ++A F L I+SN
Sbjct: 720 GQKPIART--KVFINMREVTVRFRVPPGQYVIVPCTFDAHDDASFLLRIFSN 769
>AL132848-5|CAB60389.2| 702|Caenorhabditis elegans Hypothetical
protein Y47H10A.1 protein.
Length = 702
Score = 63.7 bits (148), Expect = 1e-10
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 24/229 (10%)
Frame = +2
Query: 2 LIRLRRPLGHGETPISHIVLXTALWKTIPQYERXRLMIASKG-VWMLFSDFQRLFPRIEM 178
LIR+R P G + + W + + +R I G WM DF F +
Sbjct: 449 LIRIRSPWGKVKWK-GDFCYRSHRWFGLDKEKRESFRIKEDGEFWMSLKDFMVEFTDVYC 507
Query: 179 VHLDTETSRAELSLSE-------KQKWQMKMHQGGWKRGV-SAGGCRNYVNFFHTNPQVQ 334
+L +T ++E Q+W +G W + +AGGC ++ + F TN Q +
Sbjct: 508 CNLSADTMHEVEKMTEVKVMEHQSQQWIQASFEGEWSSRIGTAGGCDDH-DTFCTNLQYE 566
Query: 335 IMLNEPD--------TVIISLNQ----HSI---MEPKVIGFSVYKMPKFLTETANQMFFK 469
I D T+I +L Q H + +E +IG VY+MP + +M
Sbjct: 567 IHFRATDSYDSNHKCTIIAALFQKNRDHCVYKGLELFLIGLLVYEMPGPNEKVTPEMVKS 626
Query: 470 RIKSTINSQYTNSRQVSQRCQLESGAYLIMPTTFEPREEAQFTLXIYSN 616
+ + + +SR+ + R + G Y+I+P+T++P ++ +F L I++N
Sbjct: 627 QTPIADSKLFKDSREANIRFTVPLGHYVIVPSTYDPDQDGEFLLRIFTN 675
>Z82277-1|CAB05248.1| 648|Caenorhabditis elegans Hypothetical
protein LLC1.1 protein.
Length = 648
Score = 54.0 bits (124), Expect = 1e-07
Identities = 54/179 (30%), Positives = 75/179 (41%), Gaps = 9/179 (5%)
Frame = +2
Query: 131 WMLFSDFQRLFPRIEMVHLDTETSRAELSLS-EKQKWQMKMHQGGWKRGVS---AGGCRN 298
WM + F F I + L TS S S ++Q + G K G AGGC N
Sbjct: 334 WMPWESFVHYFTDISLCQL-FNTSVFSFSRSYDEQIVFSEWTTNGKKSGAPDDRAGGCHN 392
Query: 299 YVNFFHTNPQVQIMLNEPD-TVIISLNQHSIME--PKVIGFSVYKMPKFLTETANQMFFK 469
+ F NPQ + P+ +V+ +L Q+ E K F M E Q
Sbjct: 393 FKATFCNNPQYIFDIPSPNCSVMFALIQNDPSEGLKKREPFVTIGMHVMKVENNRQYRVH 452
Query: 470 RIKSTIN-SQYTNSRQVSQRCQ-LESGAYLIMPTTFEPREEAQFTLXIYSNKPLKMKVL 640
I S Y + R V Q L G YL++PTTF P+E+ F L +YS++ + L
Sbjct: 453 TAMHPIAISDYASGRSVYLHLQSLPRGRYLLIPTTFAPKEQTLFMLRVYSDEHIHFSPL 511
>U12921-1|AAB60256.1| 648|Caenorhabditis elegans sex determination
protein.
Length = 648
Score = 54.0 bits (124), Expect = 1e-07
Identities = 54/179 (30%), Positives = 75/179 (41%), Gaps = 9/179 (5%)
Frame = +2
Query: 131 WMLFSDFQRLFPRIEMVHLDTETSRAELSLS-EKQKWQMKMHQGGWKRGVS---AGGCRN 298
WM + F F I + L TS S S ++Q + G K G AGGC N
Sbjct: 334 WMPWESFVHYFTDISLCQL-FNTSVFSFSRSYDEQIVFSEWTTNGKKSGAPDDRAGGCHN 392
Query: 299 YVNFFHTNPQVQIMLNEPD-TVIISLNQHSIME--PKVIGFSVYKMPKFLTETANQMFFK 469
+ F NPQ + P+ +V+ +L Q+ E K F M E Q
Sbjct: 393 FKATFCNNPQYIFDIPSPNCSVMFALIQNDPSEGLKKREPFVTIGMHVMKVENNRQYRVH 452
Query: 470 RIKSTIN-SQYTNSRQVSQRCQ-LESGAYLIMPTTFEPREEAQFTLXIYSNKPLKMKVL 640
I S Y + R V Q L G YL++PTTF P+E+ F L +YS++ + L
Sbjct: 453 TAMHPIAISDYASGRSVYLHLQSLPRGRYLLIPTTFAPKEQTLFMLRVYSDEHIHFSPL 511
>AC024763-6|AAO12403.1| 603|Caenorhabditis elegans Calpain family
protein 4, isoform b protein.
Length = 603
Score = 31.1 bits (67), Expect = 0.87
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 13/101 (12%)
Frame = +2
Query: 2 LIRLRRPLGHGETPISHIVLXTALWKTIPQYERXRLMI--ASKG-VWMLFSDFQRLFPRI 172
L+RLR P G+ + ++ W I + + ++ + A G WM F DF F ++
Sbjct: 471 LLRLRNPWGNEKEWNGAWSDGSSEWSKIDEATKKQIDVQFARDGEFWMSFEDFFSNFTQM 530
Query: 173 EMVHLDTE----------TSRAELSLSEKQKWQMKMHQGGW 265
E+ +L E +RA ++ E+ +W M G W
Sbjct: 531 EVCNLTAEIFDEIAEMTGVNRATETVEEEHQWHEIMEDGEW 571
>Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical
protein R11A5.1a protein.
Length = 906
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Frame = +2
Query: 329 VQIMLNEPDTVIISLNQHSIMEPKVIGFSVYKMPKFLTETANQMFFKRIKSTINSQY--- 499
V ++LN ++ S N +M V+ + PK + + ++ +QY
Sbjct: 240 VVLLLNSARPLLQSRNCSVVMA--VVQLFYHVAPKAQLSQIARALVRLLRGPRETQYVVL 297
Query: 500 TNSRQVSQRCQLESGAYLIMPTTFEPREEAQFTLXIYSN--KPLKMKVL 640
TN + +R +E G Y I T F+P ++ F S+ K LK+ VL
Sbjct: 298 TNIATICERNPVEEGTYAISKTMFDPFLKSFFVRSCDSSLVKKLKLHVL 346
>Z48178-7|CAE48493.1| 212|Caenorhabditis elegans Hypothetical
protein C05C10.5b protein.
Length = 212
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 734 KEPXXRIGKIRSNRIPEXL*LRQLSSSGAGRP 639
+ P R+ ++ R+PE LRQL+++ A RP
Sbjct: 73 RTPPPRVNRVAPIRLPERRPLRQLNANDARRP 104
>Z48178-6|CAA88203.1| 212|Caenorhabditis elegans Hypothetical
protein C05C10.5a protein.
Length = 212
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 734 KEPXXRIGKIRSNRIPEXL*LRQLSSSGAGRP 639
+ P R+ ++ R+PE LRQL+++ A RP
Sbjct: 73 RTPPPRVNRVAPIRLPERRPLRQLNANDARRP 104
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 7/46 (15%)
Frame = +2
Query: 149 FQRLFPRIEMVHL----DTETSRAELSLSEKQKWQMKMH---QGGW 265
F R FP++EM L T R EL+++ KW K+H +G W
Sbjct: 1170 FIRQFPKLEMTTLIQPITRTTMRIELTITPDFKWDEKVHGSAEGFW 1215
>Z78018-2|CAB01447.1| 434|Caenorhabditis elegans Hypothetical
protein W07G4.2 protein.
Length = 434
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 292 SELRQFLPHESPSSNHVERARHCDYISEPTQHN 390
S R F+ H SPS + + HCD + H+
Sbjct: 275 SNTRHFISHNSPSDDLIYSRDHCDTVLISAPHS 307
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,890,433
Number of Sequences: 27780
Number of extensions: 346398
Number of successful extensions: 965
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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