Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2061
(759 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009771-1|AAH09771.1| 314|Homo sapiens BRCA2 and CDKN1A intera... 111 2e-24
AY064249-1|AAL55440.1| 314|Homo sapiens BRCA2 and Cip1/p21 inte... 109 8e-24
AY064247-2|AAL55438.1| 314|Homo sapiens BRCA2 and Cip1/p21 inte... 109 8e-24
AL360176-6|CAI12091.1| 314|Homo sapiens BRCA2 and CDKN1A intera... 109 8e-24
AB040451-1|BAA92928.1| 314|Homo sapiens TOK-1beta protein. 109 8e-24
AY064248-1|AAL55439.1| 322|Homo sapiens BRCA2 and Cip1/p21 inte... 87 6e-17
AY064247-1|AAL55436.1| 322|Homo sapiens BRCA2 and Cip1/p21 inte... 87 6e-17
AL360176-8|CAI12093.1| 322|Homo sapiens BRCA2 and CDKN1A intera... 87 6e-17
AL360176-7|CAI12092.1| 292|Homo sapiens BRCA2 and CDKN1A intera... 87 6e-17
AB040450-1|BAA92927.1| 322|Homo sapiens TOK-1alpha protein. 87 6e-17
>BC009771-1|AAH09771.1| 314|Homo sapiens BRCA2 and CDKN1A
interacting protein protein.
Length = 314
Score = 111 bits (268), Expect = 2e-24
Identities = 68/229 (29%), Positives = 117/229 (51%), Gaps = 16/229 (6%)
Frame = +1
Query: 1 KSNVDLGGLAQIIISQNYIGSVVKQCLXXXXXXXXXXXXXXXXVFGVTTVVNITKRKNEP 180
K+ V+ L ++I QN+IGSV+KQ VFG +++N+T+RK
Sbjct: 84 KAPVNTAELTDLLIQQNHIGSVIKQT---DVSEDSNDDMDEDEVFGFISLLNLTERKGTQ 140
Query: 181 SVAQIRELLTKLSQENADPRTKELIKYILADDSQHTGLVINERILNIPAAISVPLFASLQ 360
V QI+EL+ + ++N + E + L D ++ GL+++ER +N+P I++P++ LQ
Sbjct: 141 CVEQIQELVLRFCEKNCEKSMVEQLDKFLNDTTKPVGLLLSERFINVPPQIALPMYQQLQ 200
Query: 361 TELEKAHRKNMLYNFKYL-IWISKTYTTGESSE------------VLFANQEEKSLVSEA 501
EL AHR N Y + ISKT+ E + ++FAN EE+ +A
Sbjct: 201 KELAGAHRTNKPCGKCYFYLLISKTFVEAEKNNSKKKPSNKKKAALMFANAEEEFFYEKA 260
Query: 502 IASFDVDVTDQADL---SQWDYEXXALTPCRKILLFEXIKFGYLIDLMK 639
I F+ V +++D +W ++ +TP R ++L K ++D +K
Sbjct: 261 ILKFNYSVQEESDTCLGGKWSFDDVPMTPLRTVMLIPGDKMNEIMDKLK 309
>AY064249-1|AAL55440.1| 314|Homo sapiens BRCA2 and Cip1/p21
interacting protein, splice variant beta protein.
Length = 314
Score = 109 bits (263), Expect = 8e-24
Identities = 67/229 (29%), Positives = 118/229 (51%), Gaps = 16/229 (6%)
Frame = +1
Query: 1 KSNVDLGGLAQIIISQNYIGSVVKQCLXXXXXXXXXXXXXXXXVFGVTTVVNITKRKNEP 180
K+ V+ L ++I QN+IGSV+KQ VFG +++N+T+RK
Sbjct: 84 KAPVNTAELTDLLIQQNHIGSVIKQT---DVSEDSNDDMDEDEVFGFISLLNLTERKGTQ 140
Query: 181 SVAQIRELLTKLSQENADPRTKELIKYILADDSQHTGLVINERILNIPAAISVPLFASLQ 360
V QI+EL+ + ++N + E + L D ++ GL+++ER +N+P I++P++ LQ
Sbjct: 141 CVEQIQELVLRFCEKNCEKSMVEQLDKFLNDTTKPVGLLLSERFINVPPQIALPMYQQLQ 200
Query: 361 TELEKAHRKNMLYNFKYL-IWISKTY------------TTGESSEVLFANQEEKSLVSEA 501
EL AHR N Y + ISKT+ + + + ++FAN EE+ +A
Sbjct: 201 KELAGAHRTNKPCGKCYFYLLISKTFVEAGKNNSKKKPSNKKKAALMFANAEEEFFYEKA 260
Query: 502 IASFDVDVTDQADL---SQWDYEXXALTPCRKILLFEXIKFGYLIDLMK 639
I F+ V +++D +W ++ +TP R ++L K ++D +K
Sbjct: 261 ILKFNYSVQEESDTCLGGKWSFDDVPMTPLRTVMLIPGDKMNEIMDKLK 309
>AY064247-2|AAL55438.1| 314|Homo sapiens BRCA2 and Cip1/p21
interacting protein protein.
Length = 314
Score = 109 bits (263), Expect = 8e-24
Identities = 67/229 (29%), Positives = 118/229 (51%), Gaps = 16/229 (6%)
Frame = +1
Query: 1 KSNVDLGGLAQIIISQNYIGSVVKQCLXXXXXXXXXXXXXXXXVFGVTTVVNITKRKNEP 180
K+ V+ L ++I QN+IGSV+KQ VFG +++N+T+RK
Sbjct: 84 KAPVNTAELTDLLIQQNHIGSVIKQT---DVSEDSNDDMDEDEVFGFISLLNLTERKGTQ 140
Query: 181 SVAQIRELLTKLSQENADPRTKELIKYILADDSQHTGLVINERILNIPAAISVPLFASLQ 360
V QI+EL+ + ++N + E + L D ++ GL+++ER +N+P I++P++ LQ
Sbjct: 141 CVEQIQELVLRFCEKNCEKSMVEQLDKFLNDTTKPVGLLLSERFINVPPQIALPMYQQLQ 200
Query: 361 TELEKAHRKNMLYNFKYL-IWISKTY------------TTGESSEVLFANQEEKSLVSEA 501
EL AHR N Y + ISKT+ + + + ++FAN EE+ +A
Sbjct: 201 KELAGAHRTNKPCGKCYFYLLISKTFVEAGKNNSKKKPSNKKKAALMFANAEEEFFYEKA 260
Query: 502 IASFDVDVTDQADL---SQWDYEXXALTPCRKILLFEXIKFGYLIDLMK 639
I F+ V +++D +W ++ +TP R ++L K ++D +K
Sbjct: 261 ILKFNYSVQEESDTCLGGKWSFDDVPMTPLRTVMLIPGDKMNEIMDKLK 309
>AL360176-6|CAI12091.1| 314|Homo sapiens BRCA2 and CDKN1A
interacting protein protein.
Length = 314
Score = 109 bits (263), Expect = 8e-24
Identities = 67/229 (29%), Positives = 118/229 (51%), Gaps = 16/229 (6%)
Frame = +1
Query: 1 KSNVDLGGLAQIIISQNYIGSVVKQCLXXXXXXXXXXXXXXXXVFGVTTVVNITKRKNEP 180
K+ V+ L ++I QN+IGSV+KQ VFG +++N+T+RK
Sbjct: 84 KAPVNTAELTDLLIQQNHIGSVIKQT---DVSEDSNDDMDEDEVFGFISLLNLTERKGTQ 140
Query: 181 SVAQIRELLTKLSQENADPRTKELIKYILADDSQHTGLVINERILNIPAAISVPLFASLQ 360
V QI+EL+ + ++N + E + L D ++ GL+++ER +N+P I++P++ LQ
Sbjct: 141 CVEQIQELVLRFCEKNCEKSMVEQLDKFLNDTTKPVGLLLSERFINVPPQIALPMYQQLQ 200
Query: 361 TELEKAHRKNMLYNFKYL-IWISKTY------------TTGESSEVLFANQEEKSLVSEA 501
EL AHR N Y + ISKT+ + + + ++FAN EE+ +A
Sbjct: 201 KELAGAHRTNKPCGKCYFYLLISKTFVEAGKNNSKKKPSNKKKAALMFANAEEEFFYEKA 260
Query: 502 IASFDVDVTDQADL---SQWDYEXXALTPCRKILLFEXIKFGYLIDLMK 639
I F+ V +++D +W ++ +TP R ++L K ++D +K
Sbjct: 261 ILKFNYSVQEESDTCLGGKWSFDDVPMTPLRTVMLIPGDKMNEIMDKLK 309
>AB040451-1|BAA92928.1| 314|Homo sapiens TOK-1beta protein.
Length = 314
Score = 109 bits (263), Expect = 8e-24
Identities = 67/229 (29%), Positives = 118/229 (51%), Gaps = 16/229 (6%)
Frame = +1
Query: 1 KSNVDLGGLAQIIISQNYIGSVVKQCLXXXXXXXXXXXXXXXXVFGVTTVVNITKRKNEP 180
K+ V+ L ++I QN+IGSV+KQ VFG +++N+T+RK
Sbjct: 84 KAPVNTAELTDLLIQQNHIGSVIKQT---DVSEDSNDDMDEDEVFGFISLLNLTERKGTQ 140
Query: 181 SVAQIRELLTKLSQENADPRTKELIKYILADDSQHTGLVINERILNIPAAISVPLFASLQ 360
V QI+EL+ + ++N + E + L D ++ GL+++ER +N+P I++P++ LQ
Sbjct: 141 CVEQIQELVLRFCEKNCEKSMVEQLDKFLNDTTKPVGLLLSERFINVPPQIALPMYQQLQ 200
Query: 361 TELEKAHRKNMLYNFKYL-IWISKTY------------TTGESSEVLFANQEEKSLVSEA 501
EL AHR N Y + ISKT+ + + + ++FAN EE+ +A
Sbjct: 201 KELAGAHRTNKPCGKCYFYLLISKTFVEAGKNNSKKKPSNKKKAALMFANAEEEFFYEKA 260
Query: 502 IASFDVDVTDQADL---SQWDYEXXALTPCRKILLFEXIKFGYLIDLMK 639
I F+ V +++D +W ++ +TP R ++L K ++D +K
Sbjct: 261 ILKFNYSVQEESDTCLGGKWSFDDVPMTPLRTVMLIPGDKMNEIMDKLK 309
>AY064248-1|AAL55439.1| 322|Homo sapiens BRCA2 and Cip1/p21
interacting protein, splice variant alpha protein.
Length = 322
Score = 87.0 bits (206), Expect = 6e-17
Identities = 49/146 (33%), Positives = 80/146 (54%), Gaps = 1/146 (0%)
Frame = +1
Query: 1 KSNVDLGGLAQIIISQNYIGSVVKQCLXXXXXXXXXXXXXXXXVFGVTTVVNITKRKNEP 180
K+ V+ L ++I QN+IGSV+KQ VFG +++N+T+RK
Sbjct: 84 KAPVNTAELTDLLIQQNHIGSVIKQT---DVSEDSNDDMDEDEVFGFISLLNLTERKGTQ 140
Query: 181 SVAQIRELLTKLSQENADPRTKELIKYILADDSQHTGLVINERILNIPAAISVPLFASLQ 360
V QI+EL+ + ++N + E + L D ++ GL+++ER +N+P I++P++ LQ
Sbjct: 141 CVEQIQELVLRFCEKNCEKSMVEQLDKFLNDTTKPVGLLLSERFINVPPQIALPMYQQLQ 200
Query: 361 TELEKAHRKNMLYNFKYL-IWISKTY 435
EL AHR N Y + ISKT+
Sbjct: 201 KELAGAHRTNKPCGKCYFYLLISKTF 226
>AY064247-1|AAL55436.1| 322|Homo sapiens BRCA2 and Cip1/p21
interacting protein protein.
Length = 322
Score = 87.0 bits (206), Expect = 6e-17
Identities = 49/146 (33%), Positives = 80/146 (54%), Gaps = 1/146 (0%)
Frame = +1
Query: 1 KSNVDLGGLAQIIISQNYIGSVVKQCLXXXXXXXXXXXXXXXXVFGVTTVVNITKRKNEP 180
K+ V+ L ++I QN+IGSV+KQ VFG +++N+T+RK
Sbjct: 84 KAPVNTAELTDLLIQQNHIGSVIKQT---DVSEDSNDDMDEDEVFGFISLLNLTERKGTQ 140
Query: 181 SVAQIRELLTKLSQENADPRTKELIKYILADDSQHTGLVINERILNIPAAISVPLFASLQ 360
V QI+EL+ + ++N + E + L D ++ GL+++ER +N+P I++P++ LQ
Sbjct: 141 CVEQIQELVLRFCEKNCEKSMVEQLDKFLNDTTKPVGLLLSERFINVPPQIALPMYQQLQ 200
Query: 361 TELEKAHRKNMLYNFKYL-IWISKTY 435
EL AHR N Y + ISKT+
Sbjct: 201 KELAGAHRTNKPCGKCYFYLLISKTF 226
>AL360176-8|CAI12093.1| 322|Homo sapiens BRCA2 and CDKN1A
interacting protein protein.
Length = 322
Score = 87.0 bits (206), Expect = 6e-17
Identities = 49/146 (33%), Positives = 80/146 (54%), Gaps = 1/146 (0%)
Frame = +1
Query: 1 KSNVDLGGLAQIIISQNYIGSVVKQCLXXXXXXXXXXXXXXXXVFGVTTVVNITKRKNEP 180
K+ V+ L ++I QN+IGSV+KQ VFG +++N+T+RK
Sbjct: 84 KAPVNTAELTDLLIQQNHIGSVIKQT---DVSEDSNDDMDEDEVFGFISLLNLTERKGTQ 140
Query: 181 SVAQIRELLTKLSQENADPRTKELIKYILADDSQHTGLVINERILNIPAAISVPLFASLQ 360
V QI+EL+ + ++N + E + L D ++ GL+++ER +N+P I++P++ LQ
Sbjct: 141 CVEQIQELVLRFCEKNCEKSMVEQLDKFLNDTTKPVGLLLSERFINVPPQIALPMYQQLQ 200
Query: 361 TELEKAHRKNMLYNFKYL-IWISKTY 435
EL AHR N Y + ISKT+
Sbjct: 201 KELAGAHRTNKPCGKCYFYLLISKTF 226
>AL360176-7|CAI12092.1| 292|Homo sapiens BRCA2 and CDKN1A
interacting protein protein.
Length = 292
Score = 87.0 bits (206), Expect = 6e-17
Identities = 49/146 (33%), Positives = 80/146 (54%), Gaps = 1/146 (0%)
Frame = +1
Query: 1 KSNVDLGGLAQIIISQNYIGSVVKQCLXXXXXXXXXXXXXXXXVFGVTTVVNITKRKNEP 180
K+ V+ L ++I QN+IGSV+KQ VFG +++N+T+RK
Sbjct: 84 KAPVNTAELTDLLIQQNHIGSVIKQT---DVSEDSNDDMDEDEVFGFISLLNLTERKGTQ 140
Query: 181 SVAQIRELLTKLSQENADPRTKELIKYILADDSQHTGLVINERILNIPAAISVPLFASLQ 360
V QI+EL+ + ++N + E + L D ++ GL+++ER +N+P I++P++ LQ
Sbjct: 141 CVEQIQELVLRFCEKNCEKSMVEQLDKFLNDTTKPVGLLLSERFINVPPQIALPMYQQLQ 200
Query: 361 TELEKAHRKNMLYNFKYL-IWISKTY 435
EL AHR N Y + ISKT+
Sbjct: 201 KELAGAHRTNKPCGKCYFYLLISKTF 226
>AB040450-1|BAA92927.1| 322|Homo sapiens TOK-1alpha protein.
Length = 322
Score = 87.0 bits (206), Expect = 6e-17
Identities = 49/146 (33%), Positives = 80/146 (54%), Gaps = 1/146 (0%)
Frame = +1
Query: 1 KSNVDLGGLAQIIISQNYIGSVVKQCLXXXXXXXXXXXXXXXXVFGVTTVVNITKRKNEP 180
K+ V+ L ++I QN+IGSV+KQ VFG +++N+T+RK
Sbjct: 84 KAPVNTAELTDLLIQQNHIGSVIKQT---DVSEDSNDDMDEDEVFGFISLLNLTERKGTQ 140
Query: 181 SVAQIRELLTKLSQENADPRTKELIKYILADDSQHTGLVINERILNIPAAISVPLFASLQ 360
V QI+EL+ + ++N + E + L D ++ GL+++ER +N+P I++P++ LQ
Sbjct: 141 CVEQIQELVLRFCEKNCEKSMVEQLDKFLNDTTKPVGLLLSERFINVPPQIALPMYQQLQ 200
Query: 361 TELEKAHRKNMLYNFKYL-IWISKTY 435
EL AHR N Y + ISKT+
Sbjct: 201 KELAGAHRTNKPCGKCYFYLLISKTF 226
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,104,024
Number of Sequences: 237096
Number of extensions: 1353092
Number of successful extensions: 2070
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2055
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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