Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2060
(760 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 30 1.6
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 29 3.6
U41545-7|AAK39136.1| 687|Caenorhabditis elegans Hypothetical pr... 29 3.6
U41542-14|ABO16444.1| 331|Caenorhabditis elegans Hsn abnormal m... 29 3.6
U41542-13|ABO16442.1| 390|Caenorhabditis elegans Hsn abnormal m... 29 3.6
U41542-12|ABO16443.1| 392|Caenorhabditis elegans Hsn abnormal m... 29 3.6
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 29 3.6
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 29 3.6
Z75533-8|CAA99821.1| 464|Caenorhabditis elegans Hypothetical pr... 29 4.7
AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical ... 29 4.7
AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility... 29 4.7
Z72511-4|CAA96660.1| 395|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 28 6.3
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z93397-8|CAB07716.2| 545|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 28 8.3
AL132904-27|CAC35854.1| 545|Caenorhabditis elegans Hypothetical... 28 8.3
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 28 8.3
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 30.3 bits (65), Expect = 1.6
Identities = 35/100 (35%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Frame = -3
Query: 665 PFRSASPCD-PTLSPQLSRTPDDSSRRSQSXGTPRRPR-SCLHAQNTLISQAPIYG*YPR 492
P R P P+ SP R D +RS+S PRR R S + IS++P+ R
Sbjct: 77 PKRKREPIRAPSASPPRRRRDDSPRKRSRSP--PRRTRRSPSPPRRRRISRSPVRR--SR 132
Query: 491 APLRL*PA*IRCRRW*PPPNRSS-DRSGPPRTPRASQIRA 375
+P R + R R PPP R RS PP R Q R+
Sbjct: 133 SPPRRQVS--RSRS--PPPRRQQRSRSPPPAKRRRDQSRS 168
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -3
Query: 665 PFRSASPCDPTLSPQLSRTPDDSSRRSQSXGTPRRPRSCLHAQNTLISQAP 513
P R SP SP+ R+P SSR PRRPR Q + ++P
Sbjct: 488 PRRRQSP-QRRRSPRRRRSPSSSSRSRSPPPPPRRPRQDSEQQAPVAVKSP 537
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -3
Query: 407 PRTPRASQIRADPTRLCLPPHLSSVTPCRGHCVVFGCSSSYD--ISGAASQRSARPCC*N 234
P TP P +CLP ++ + R CV G +YD I A +R + C
Sbjct: 311 PSTPACPAPGCQPGCICLPGYIRRDSSPRSACVPRGLCQAYDLTIRCADEKRQYQTCGSA 370
Query: 233 ERISCS 216
ISC+
Sbjct: 371 CPISCA 376
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -3
Query: 407 PRTPRASQIRADPTRLCLPPHLSSVTPCRGHCVVFGCSSSYD--ISGAASQRSARPCC*N 234
P TP P +CLP ++ + R CV G +YD I A +R + C
Sbjct: 102 PSTPACPAPGCQPGCICLPGYIRRDSSPRSACVPRGLCQAYDLTIRCADEKRQYQTCGSA 161
Query: 233 ERISCS 216
ISC+
Sbjct: 162 CPISCA 167
>U41545-7|AAK39136.1| 687|Caenorhabditis elegans Hypothetical
protein C02F12.8 protein.
Length = 687
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +2
Query: 62 KSIFHKINRTVAAMEVDRIASDS---ENVAMDEKPVVEQGAGDAATSNPERLRRKNKKYA 232
K + K R +AA + +++ +D E + + VEQ GD ++S + ++K K
Sbjct: 496 KKLTKKEKRLMAAQKANQLETDDDVLEAAYRERQKHVEQAGGDYSSSGQKDQKKKRGK-- 553
Query: 233 RSNSKDGPSAVTP 271
R S PS ++P
Sbjct: 554 RPVSNPPPSLISP 566
>U41542-14|ABO16444.1| 331|Caenorhabditis elegans Hsn abnormal
migration protein2, isoform c protein.
Length = 331
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 395 EEYVEDQNDPNYDSEAV--TNGDIEFKQVIVEAEPEDIIRKSEPVILEYFEH 544
++ ++ N +YD V T DI+F+ + P +I K+EP EH
Sbjct: 141 KDSIQSSNISDYDDLEVQTTEEDIKFEVESSDVSPRSVIVKTEPTFKRELEH 192
>U41542-13|ABO16442.1| 390|Caenorhabditis elegans Hsn abnormal
migration protein2, isoform a protein.
Length = 390
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 395 EEYVEDQNDPNYDSEAV--TNGDIEFKQVIVEAEPEDIIRKSEPVILEYFEH 544
++ ++ N +YD V T DI+F+ + P +I K+EP EH
Sbjct: 200 KDSIQSSNISDYDDLEVQTTEEDIKFEVESSDVSPRSVIVKTEPTFKRELEH 251
>U41542-12|ABO16443.1| 392|Caenorhabditis elegans Hsn abnormal
migration protein2, isoform b protein.
Length = 392
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 395 EEYVEDQNDPNYDSEAV--TNGDIEFKQVIVEAEPEDIIRKSEPVILEYFEH 544
++ ++ N +YD V T DI+F+ + P +I K+EP EH
Sbjct: 202 KDSIQSSNISDYDDLEVQTTEEDIKFEVESSDVSPRSVIVKTEPTFKRELEH 253
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -3
Query: 443 PPPNRSSDRSGPPRTPRASQIRADPTRLCLPPHLSSVTPCRG 318
PP ++ PP+ R Q R+ P +PP + S P G
Sbjct: 529 PPVHQQPPPQQPPQQQRQKQQRSQPAPARVPPQVPSQVPVTG 570
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -3
Query: 443 PPPNRSSDRSGPPRTPRASQIRADPTRLCLPPHLSSVTPCRG 318
PP ++ PP+ R Q R+ P +PP + S P G
Sbjct: 529 PPVHQQPPPQQPPQQQRQKQQRSQPAPARVPPQVPSQVPVTG 570
>Z75533-8|CAA99821.1| 464|Caenorhabditis elegans Hypothetical
protein C54G4.9 protein.
Length = 464
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/75 (21%), Positives = 32/75 (42%)
Frame = +2
Query: 419 DPNYDSEAVTNGDIEFKQVIVEAEPEDIIRKSEPVILEYFEHGDTNAAAEEFLXFVTAAR 598
D + +E + + Q I+ + + SE V+ + + A EE ++ +
Sbjct: 31 DEEFSAEKCEDVFVRCLQEIISWDLTVSLEISETVVRQMMNRLENQAVLEEMCNYIIKQQ 90
Query: 599 SHLVCETIVEIALDH 643
S + E VEI ++H
Sbjct: 91 SSVTVEIAVEIMIEH 105
>AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical
protein Y17G7A.1 protein.
Length = 315
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/84 (25%), Positives = 36/84 (42%)
Frame = +2
Query: 47 CLTVLKSIFHKINRTVAAMEVDRIASDSENVAMDEKPVVEQGAGDAATSNPERLRRKNKK 226
C +++ HK+N T+A + V + +EN +E G +S+ +R N
Sbjct: 26 CADLIEKELHKLNATIARVPVGEFVAYAENAVKNETDSEAVG-----SSSVKRENSANDS 80
Query: 227 YARSNSKDGPSAVTPLPKYRSWKN 298
A +N D S+ + R KN
Sbjct: 81 PANTNDVDIVSSPVKRGRGRKAKN 104
>AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility
group protein I beta protein.
Length = 315
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/84 (25%), Positives = 36/84 (42%)
Frame = +2
Query: 47 CLTVLKSIFHKINRTVAAMEVDRIASDSENVAMDEKPVVEQGAGDAATSNPERLRRKNKK 226
C +++ HK+N T+A + V + +EN +E G +S+ +R N
Sbjct: 26 CADLIEKELHKLNATIARVPVGEFVAYAENAVKNETDSEAVG-----SSSVKRENSANDS 80
Query: 227 YARSNSKDGPSAVTPLPKYRSWKN 298
A +N D S+ + R KN
Sbjct: 81 PANTNDVDIVSSPVKRGRGRKAKN 104
>Z72511-4|CAA96660.1| 395|Caenorhabditis elegans Hypothetical
protein F55A11.7 protein.
Length = 395
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 437 PNRSSDRSGPPRTPRASQIRADPTRLCLPPHLSSVTPC 324
P +++ R P +T R PT+ LP +L S T C
Sbjct: 123 PEQATPRQSPTKTTRPVFTTKTPTKTSLPYNLESGTSC 160
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.2 protein.
Length = 1263
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +2
Query: 383 SEML--EEYVEDQNDPNYDSEAVTNGDIEFKQV 475
+EML E+ V ++++ +YD E NG+I FK V
Sbjct: 354 AEMLIKEDNVIEKDETDYDVEVEVNGNISFKNV 386
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 386 EMLEEYVEDQNDPNYDSEAVTNGDIEFKQVIVEAEPED 499
E+LEEY D+ + + D ++V + D+E + V+ EP +
Sbjct: 858 EVLEEY-GDEEEEDIDMKSVESSDVEEESVMEVLEPSE 894
>Z93397-8|CAB07716.2| 545|Caenorhabditis elegans Hypothetical
protein ZC482.2 protein.
Length = 545
Score = 27.9 bits (59), Expect = 8.3
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +2
Query: 50 LTVLKSIFHKINRTVAAMEVDRIASDSENVAMDEKPVVEQGAGDAATSN-PERLRRKNKK 226
+ LK F+ N ++ ++ V +D E + V A +T ERL++KN
Sbjct: 88 MRTLKGGFNIENTSLTSLSV--FTADKEKGNFNVVGVGNSAAAMTSTKLLAERLKQKNGV 145
Query: 227 YARSNSK-DGPSAVTPLPKYR 286
Y R+NS+ + PS + L YR
Sbjct: 146 YIRNNSQLNDPSVLYDLYLYR 166
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +1
Query: 340 ERWGGRQRRVGSARI*DARGVRGGPERSELRFGGGHQRR-HRIQAGHSRSGARG 498
+R+GG +R G D G GG R+GGG RR + G RSG G
Sbjct: 197 DRYGGDRRGGGGGGGGDRYGGGGGDRYGGDRYGGGGGRRGSPDRRGGFRSGGGG 250
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = +2
Query: 110 DRIASDSENVAMDEKPVVE-QGAGDAATS----NPERLRRKNKKYARSNSKDGPSAVTPL 274
DR +E+V PV + +G G + T NP + R + RS S++ P
Sbjct: 241 DRRDIKNEDVKTRGSPVKKTRGTGRSRTPEAILNPRKQRTPVNHHKRSKSQETKLVAMPS 300
Query: 275 PKYRSWKNSRRPRN 316
P ++ N+ R RN
Sbjct: 301 PNSMAYYNTSRARN 314
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 27.9 bits (59), Expect = 8.3
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = -3
Query: 668 RPFRSASPCDPTLSPQLSRTPDDSSRRSQSXGTPRRPRSCLHAQNTLISQ-APIYG*YPR 492
RP R A P SR P SR + + PR+ + ++ T++++ AP R
Sbjct: 254 RPTRPAVPAASAPRALTSRAPAGPSRPTTTRNAAPAPRTAVPSRATVLTKTAPASKAPTR 313
Query: 491 APLRL*PA*IRCRRW*PPPNRSSDRSGPPRTPRASQIRADP 369
AP+ PA R P P R G P P A+ +A+P
Sbjct: 314 APV---PA-----RSAPAPPR-----GAPAKPAANTAKAEP 341
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 27.9 bits (59), Expect = 8.3
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = -3
Query: 668 RPFRSASPCDPTLSPQLSRTPDDSSRRSQSXGTPRRPRSCLHAQNTLISQ-APIYG*YPR 492
RP R A P SR P SR + + PR+ + ++ T++++ AP R
Sbjct: 254 RPTRPAVPAASAPRALTSRAPAGPSRPTTTRNAAPAPRTAVPSRATVLTKTAPASKAPTR 313
Query: 491 APLRL*PA*IRCRRW*PPPNRSSDRSGPPRTPRASQIRADP 369
AP+ PA R P P R G P P A+ +A+P
Sbjct: 314 APV---PA-----RSAPAPPR-----GAPAKPAANTAKAEP 341
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 27.9 bits (59), Expect = 8.3
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = -3
Query: 668 RPFRSASPCDPTLSPQLSRTPDDSSRRSQSXGTPRRPRSCLHAQNTLISQ-APIYG*YPR 492
RP R A P SR P SR + + PR+ + ++ T++++ AP R
Sbjct: 254 RPTRPAVPAASAPRALTSRAPAGPSRPTTTRNAAPAPRTAVPSRATVLTKTAPASKAPTR 313
Query: 491 APLRL*PA*IRCRRW*PPPNRSSDRSGPPRTPRASQIRADP 369
AP+ PA R P P R G P P A+ +A+P
Sbjct: 314 APV---PA-----RSAPAPPR-----GAPAKPAANTAKAEP 341
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = +2
Query: 110 DRIASDSENVAMDEKPVVE-QGAGDAATS----NPERLRRKNKKYARSNSKDGPSAVTPL 274
DR +E+V PV + +G G + T NP + R + RS S++ P
Sbjct: 241 DRRDIKNEDVKTRGSPVKKTRGTGRSRTPEAILNPRKQRTPVNHHKRSKSQETKLVAMPS 300
Query: 275 PKYRSWKNSRRPRN 316
P ++ N+ R RN
Sbjct: 301 PNSMAYYNTSRARN 314
>AL132904-27|CAC35854.1| 545|Caenorhabditis elegans Hypothetical
protein ZC482.2 protein.
Length = 545
Score = 27.9 bits (59), Expect = 8.3
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +2
Query: 50 LTVLKSIFHKINRTVAAMEVDRIASDSENVAMDEKPVVEQGAGDAATSN-PERLRRKNKK 226
+ LK F+ N ++ ++ V +D E + V A +T ERL++KN
Sbjct: 88 MRTLKGGFNIENTSLTSLSV--FTADKEKGNFNVVGVGNSAAAMTSTKLLAERLKQKNGV 145
Query: 227 YARSNSK-DGPSAVTPLPKYR 286
Y R+NS+ + PS + L YR
Sbjct: 146 YIRNNSQLNDPSVLYDLYLYR 166
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = -3
Query: 443 PPPNRSSDRSGPPRTPRASQIRADPTRLCLPPHLSSVTPCRG 318
PPP +S+ + GPP A + T P ++ P G
Sbjct: 29 PPPPKSASKMGPPPPAPAPPTAPEATPAAPAPDAAAAAPAEG 70
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,760,630
Number of Sequences: 27780
Number of extensions: 327796
Number of successful extensions: 1345
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1342
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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