Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2058
         (780 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...   111   2e-26
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    33   0.013
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            27   0.65 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            27   0.86 
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          24   4.6  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          24   4.6  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          24   4.6  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          24   4.6  
AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.         24   6.1  
AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.         24   6.1  
AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.         24   6.1  
AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.         24   6.1  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   8.0  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   8.0  

>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
            calcium/calmodulin-dependentprotein kinase, CAKI protein.
          Length = 872

 Score =  111 bits (268), Expect = 2e-26
 Identities = 71/227 (31%), Positives = 117/227 (51%), Gaps = 5/227 (2%)
 Frame = +2

Query: 104  EQAELAIIVSRAHFKALIEAHDQIGK-IWLERGSGIDDKLIPNEFPDLIEFSKESPEGN- 277
            E++EL  ++   H +AL+  HD + + ++ E    +     P   P L   + E   G+ 
Sbjct: 409  EKSELINLLGSPHIQALLHTHDVVAREVYGEEALRVTP---PPIAPYLNGGNDELDNGDA 465

Query: 278  GDMP-IETVKVVGLRKVPGQPLGLTVTTDEHGQLIVARILAGSAAAKQALVSVGDVLLEV 454
            G++  +  V++V  +K   +P+G+T+   E G+ IVARI+ G    +QA + VGD + E+
Sbjct: 466  GELQHVTRVRLVQFQKNTDEPMGITLKMTEDGRCIVARIMHGGMIHRQATLHVGDEIREI 525

Query: 455  DGVHIESE--EQLKEAVAKPNDRVTLKVGPNLXEKSSQLTNKLTCYVRTLFDYYPTQDTL 628
            +G  ++ +   QL+  +      VT K+ P+       +      +VR  FDY P  D L
Sbjct: 526  NGQPVQHQTVSQLQRLLRDARGSVTFKIVPSYRSAPPPVE----IFVRAQFDYDPLDDEL 581

Query: 629  IPXKEIGLTFKXGDILQISDRXDPNWXQASHVXRARIXXLVPSPELK 769
            IP  + G+ F+ GDILQI  + D +W QA H        L+PSPEL+
Sbjct: 582  IPCAQAGIAFRVGDILQIISKDDHHWWQARHDAAGGSAGLIPSPELQ 628


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 32.7 bits (71), Expect = 0.013
 Identities = 18/58 (31%), Positives = 25/58 (43%)
 Frame = +2

Query: 587 VRTLFDYYPTQDTLIPXKEIGLTFKXGDILQISDRXDPNWXQASHVXRARIXXLVPSP 760
           VRT   Y  + D   P     ++F+ GD L I ++ D NW     V        +PSP
Sbjct: 89  VRTNVSYDGSLDDDSPVHGSAVSFEVGDFLHIKEKYDNNWWIGRLVKEGCEVGFIPSP 146


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 27.1 bits (57), Expect = 0.65
 Identities = 21/81 (25%), Positives = 35/81 (43%)
 Frame = +2

Query: 302  KVVGLRKVPGQPLGLTVTTDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIESEE 481
            KV+  R  P Q  G     D+H QLI A+   G    K A ++      E+ G+     +
Sbjct: 2256 KVLSTRSFPYQ-YGHRYDYDDHDQLIKAKYFHGLEELKLAPLTYHTFHKEIKGIDEAKSK 2314

Query: 482  QLKEAVAKPNDRVTLKVGPNL 544
             + +A+ + +   T    P+L
Sbjct: 2315 NIWDALREKSFLTTDCTNPSL 2335


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 26.6 bits (56), Expect = 0.86
 Identities = 21/81 (25%), Positives = 36/81 (44%)
 Frame = +2

Query: 302  KVVGLRKVPGQPLGLTVTTDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIESEE 481
            KV+  R  P Q  G     D+H QLI A+   G    K A ++      E+ G+     +
Sbjct: 2266 KVLSTRSFPYQ-YGHRYDYDDHDQLIKAKYFHGLEELKLAPLTHHTFHKEIKGIDEAKSK 2324

Query: 482  QLKEAVAKPNDRVTLKVGPNL 544
            ++ +A+ + +   T    P+L
Sbjct: 2325 KIWDALREKSFLTTDCTNPSL 2345


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 437 DVLLEVDGVHIESEEQLKEAVAKPNDRVTLKV 532
           D L E   V  +    LKE VAKP+D V  +V
Sbjct: 68  DTLKEAKMVEEQILRLLKEPVAKPSDMVKQEV 99


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 437 DVLLEVDGVHIESEEQLKEAVAKPNDRVTLKV 532
           D L E   V  +    LKE VAKP+D V  +V
Sbjct: 68  DTLKEAKMVEEQILRLLKEPVAKPSDMVKQEV 99


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 437 DVLLEVDGVHIESEEQLKEAVAKPNDRVTLKV 532
           D L E   V  +    LKE VAKP+D V  +V
Sbjct: 68  DTLKEAKMVEEQILRLLKEPVAKPSDMVKQEV 99


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 437 DVLLEVDGVHIESEEQLKEAVAKPNDRVTLKV 532
           D L E   V  +    LKE VAKP+D V  +V
Sbjct: 68  DTLKEAKMVEEQILRLLKEPVAKPSDMVKQEV 99


>AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 16/54 (29%), Positives = 23/54 (42%)
 Frame = -1

Query: 387 LATISCPCSSVVTVKPKGCPGTFLRPTTFTVSIGISPLPSGLSFENSIRSGNSF 226
           +A  S   ++  TVKP         PT  T + G       L FE++   G+SF
Sbjct: 121 VAPKSTTTTTTTTVKPTTTTPPPCPPTLTTFNGGQPTCAGKLLFEDTFEQGSSF 174


>AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 16/54 (29%), Positives = 23/54 (42%)
 Frame = -1

Query: 387 LATISCPCSSVVTVKPKGCPGTFLRPTTFTVSIGISPLPSGLSFENSIRSGNSF 226
           +A  S   ++  TVKP         PT  T + G       L FE++   G+SF
Sbjct: 121 VAPKSTTTTTTTTVKPTTTTPPPCPPTLTTFNGGQPTCAGKLLFEDTFEQGSSF 174


>AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 16/54 (29%), Positives = 23/54 (42%)
 Frame = -1

Query: 387 LATISCPCSSVVTVKPKGCPGTFLRPTTFTVSIGISPLPSGLSFENSIRSGNSF 226
           +A  S   ++  TVKP         PT  T + G       L FE++   G+SF
Sbjct: 121 VAPKSTTTTTTTTVKPTTTTPPPCPPTLTTFNGGQPTCAGKLLFEDTFEQGSSF 174


>AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 16/54 (29%), Positives = 23/54 (42%)
 Frame = -1

Query: 387 LATISCPCSSVVTVKPKGCPGTFLRPTTFTVSIGISPLPSGLSFENSIRSGNSF 226
           +A  S   ++  TVKP         PT  T + G       L FE++   G+SF
Sbjct: 121 VAPKSTTTTTTTTVKPTTTTPPPCPPTLTTFNGGQPTCAGKLLFEDTFEQGSSF 174


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 11/48 (22%), Positives = 19/48 (39%)
 Frame = +2

Query: 452 VDGVHIESEEQLKEAVAKPNDRVTLKVGPNLXEKSSQLTNKLTCYVRT 595
           VD +     EQ +   +KP + + +       ++ S     L CY  T
Sbjct: 222 VDHLLPSPAEQCRILASKPAETIKIDTSGRAFDRMSSTRKSLVCYTTT 269


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 11/48 (22%), Positives = 19/48 (39%)
 Frame = +2

Query: 452 VDGVHIESEEQLKEAVAKPNDRVTLKVGPNLXEKSSQLTNKLTCYVRT 595
           VD +     EQ +   +KP + + +       ++ S     L CY  T
Sbjct: 223 VDHLLPSPAEQCRILASKPAETIKIDTSGRAFDRMSSTRKSLVCYTTT 270


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 753,610
Number of Sequences: 2352
Number of extensions: 15491
Number of successful extensions: 24
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)