Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2047
         (360 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094816-1|AAM11169.1|  632|Drosophila melanogaster LD33222p pro...    37   0.009
AE014298-1845|AAF48225.1|  757|Drosophila melanogaster CG4351-PA...    37   0.009
BT016057-1|AAV36942.1|  961|Drosophila melanogaster LP14942p pro...    30   1.0  
AE014296-3038|AAG22572.1|  961|Drosophila melanogaster CG18811-P...    30   1.0  
AY241926-1|AAO85275.1|  827|Drosophila melanogaster chondroitin ...    27   5.4  
AE014298-2180|AAS65341.2|  832|Drosophila melanogaster CG9220-PC...    27   5.4  

>AY094816-1|AAM11169.1|  632|Drosophila melanogaster LD33222p
           protein.
          Length = 632

 Score = 36.7 bits (81), Expect = 0.009
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +1

Query: 142 ENDQLPLTESLADAVTVYPIMDTHRFYXIHAYISRVFLERDHE 270
           E  +L   E+  +A TVYP+     FY +HAY S+  LE+  E
Sbjct: 120 EFSELAKEEAFRNASTVYPVQTPEDFYRLHAYYSKHHLEKVQE 162


>AE014298-1845|AAF48225.1|  757|Drosophila melanogaster CG4351-PA
           protein.
          Length = 757

 Score = 36.7 bits (81), Expect = 0.009
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +1

Query: 142 ENDQLPLTESLADAVTVYPIMDTHRFYXIHAYISRVFLERDHE 270
           E  +L   E+  +A TVYP+     FY +HAY S+  LE+  E
Sbjct: 245 EFSELAKEEAFRNASTVYPVQTPEDFYRLHAYYSKHHLEKVQE 287


>BT016057-1|AAV36942.1|  961|Drosophila melanogaster LP14942p
           protein.
          Length = 961

 Score = 29.9 bits (64), Expect = 1.0
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +3

Query: 189 SVSHHGHSQVLRXTRLHITGVFGTRPRGGAETTXLHVAQLRAPPPRVQEQ 338
           S+ H  +S V + +    T V+   P+ G  TT +HV    APP + Q Q
Sbjct: 398 SLEHQQNSMVQQVS----TQVYQAAPQAGGTTTPVHVLYAPAPPAQQQPQ 443


>AE014296-3038|AAG22572.1|  961|Drosophila melanogaster CG18811-PA
           protein.
          Length = 961

 Score = 29.9 bits (64), Expect = 1.0
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +3

Query: 189 SVSHHGHSQVLRXTRLHITGVFGTRPRGGAETTXLHVAQLRAPPPRVQEQ 338
           S+ H  +S V + +    T V+   P+ G  TT +HV    APP + Q Q
Sbjct: 398 SLEHQQNSMVQQVS----TQVYQAAPQAGGTTTPVHVLYAPAPPAQQQPQ 443


>AY241926-1|AAO85275.1|  827|Drosophila melanogaster chondroitin
           synthase-like protein protein.
          Length = 827

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +1

Query: 166 ESLADAVTVYPIMDTHRFYXIHAYISRVFLERDHEEVLKL 285
           + + +A+T++PI      Y +H+Y+  +  E   +E L L
Sbjct: 272 KEIHNAITLHPIKQAPLMYRLHSYVQGLKAEEMRQESLLL 311


>AE014298-2180|AAS65341.2|  832|Drosophila melanogaster CG9220-PC
           protein.
          Length = 832

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +1

Query: 166 ESLADAVTVYPIMDTHRFYXIHAYISRVFLERDHEEVLKL 285
           + + +A+T++PI      Y +H+Y+  +  E   +E L L
Sbjct: 277 KEIHNAITLHPIKQAPLMYRLHSYVQGLKAEEMRQESLLL 316


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,232,146
Number of Sequences: 53049
Number of extensions: 199261
Number of successful extensions: 448
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 901135692
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)