Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2045
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...   398   e-111
AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...   398   e-111
U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...   397   e-111
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...   397   e-111
BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p pro...   185   4e-47
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    29   8.0  

>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score =  398 bits (980), Expect = e-111
 Identities = 180/197 (91%), Positives = 189/197 (95%)
 Frame = +2

Query: 14  ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 193
           + MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 12  VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 71

Query: 194 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 373
           QLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA
Sbjct: 72  QLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 131

Query: 374 FGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 553
           FGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER
Sbjct: 132 FGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 191

Query: 554 DEFXKLREXGRLANDGC 604
           + + +LR+  RL  DGC
Sbjct: 192 ERYEELRDDNRLEPDGC 208


>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score =  398 bits (980), Expect = e-111
 Identities = 180/197 (91%), Positives = 189/197 (95%)
 Frame = +2

Query: 14  ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 193
           + MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 18  VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 77

Query: 194 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 373
           QLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA
Sbjct: 78  QLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 137

Query: 374 FGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 553
           FGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER
Sbjct: 138 FGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 197

Query: 554 DEFXKLREXGRLANDGC 604
           + + +LR+  RL  DGC
Sbjct: 198 ERYEELRDDNRLEPDGC 214


>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score =  397 bits (978), Expect = e-111
 Identities = 180/195 (92%), Positives = 188/195 (96%)
 Frame = +2

Query: 20  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 199
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 200 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 379
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 380 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDE 559
           KPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ 
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERER 180

Query: 560 FXKLREXGRLANDGC 604
           + +LR+  RL  DGC
Sbjct: 181 YEELRDDNRLEPDGC 195


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score =  397 bits (978), Expect = e-111
 Identities = 180/195 (92%), Positives = 188/195 (96%)
 Frame = +2

Query: 20  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 199
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 200 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 379
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 380 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDE 559
           KPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ 
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERER 180

Query: 560 FXKLREXGRLANDGC 604
           + +LR+  RL  DGC
Sbjct: 181 YEELRDDNRLEPDGC 195


>BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p
           protein.
          Length = 197

 Score =  185 bits (451), Expect = 4e-47
 Identities = 112/199 (56%), Positives = 127/199 (63%), Gaps = 2/199 (1%)
 Frame = +2

Query: 14  ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 193
           + MGRRPARCYRY           C+  P PK R F  G     +  F L          
Sbjct: 5   VEMGRRPARCYRY-----------CKNKPYPKSR-FCRGVPDPKIRIFDL---------- 42

Query: 194 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRI--NKMLSCAGADRLQTGMR 367
                 +E   +C   +LV     D++  ++        RI  NKMLSCAGADRLQTGMR
Sbjct: 43  GRKKATVEDFPLCV--HLVS----DEYE-QLSSEALEAGRICCNKMLSCAGADRLQTGMR 95

Query: 368 GAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKY 547
           GAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKY
Sbjct: 96  GAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKY 155

Query: 548 ERDEFXKLREXGRLANDGC 604
           ER+ + +LR+  RL  DGC
Sbjct: 156 ERERYEELRDDNRLEPDGC 174


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -3

Query: 218 PPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRTS 78
           PPK  S+    +RTP+         + S+   R   SWD V+  R S
Sbjct: 544 PPKKESAQSAAKRTPADSVFTKATANTSARKPRASDSWDYVYKQRAS 590


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,364,149
Number of Sequences: 53049
Number of extensions: 747487
Number of successful extensions: 2242
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2241
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)