Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2044
(629 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK126441-1|BAC86552.1| 154|Homo sapiens protein ( Homo sapiens ... 33 0.63
DQ496100-1|ABF47089.1| 1158|Homo sapiens hephaestin protein. 31 2.5
BC011561-1|AAH11561.1| 1158|Homo sapiens hephaestin protein. 31 2.5
AY358990-1|AAQ89349.1| 1160|Homo sapiens HEPH protein. 31 2.5
AL157698-2|CAI41472.1| 1158|Homo sapiens hephaestin protein. 31 2.5
AL157698-1|CAI41471.1| 891|Homo sapiens hephaestin protein. 31 2.5
AL030998-3|CAI42809.1| 811|Homo sapiens hephaestin protein. 31 2.5
AL030998-2|CAI42808.1| 1158|Homo sapiens hephaestin protein. 31 2.5
AL030998-1|CAI42807.1| 891|Homo sapiens hephaestin protein. 31 2.5
AJ296162-1|CAC35365.2| 1158|Homo sapiens hephaestin protein. 31 2.5
AF148860-1|AAK08131.1| 1158|Homo sapiens hephaestin protein. 31 2.5
AB014598-1|BAA31673.2| 1104|Homo sapiens KIAA0698 protein protein. 31 2.5
>AK126441-1|BAC86552.1| 154|Homo sapiens protein ( Homo sapiens
cDNA FLJ44477 fis, clone UTERU2031703. ).
Length = 154
Score = 33.5 bits (73), Expect = 0.63
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 3/112 (2%)
Frame = -3
Query: 363 HPSPSCVAPTPCRGDSMGVGSSLVAGTSRIILEAGLLSRP---PLVLTSTVRTRLSGPG* 193
HP + +P P RG + G ++ AG + AG RP P+ S R L G
Sbjct: 35 HPDWAVGSPLPRRGGTRGRHAAAGAGETTEKEPAGGRKRPRPRPMAAQSLDRGFLEG--- 91
Query: 192 VWTTCPRGHVLRGSVESTMRTVSPHCKSSPAALPSIFLGSSVGRYSLTHLLQ 37
W C H LR + S + S + P LP + L GR T L Q
Sbjct: 92 AWDPC--CHCLRLGIHSRLLDPSLQPRWDPCLLPLLPLAPGRGRAEETSLEQ 141
>DQ496100-1|ABF47089.1| 1158|Homo sapiens hephaestin protein.
Length = 1158
Score = 31.5 bits (68), Expect = 2.5
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Frame = -2
Query: 331 LSWRLYGRGLVARCRHQQDHLGGRSLKQTAARSDVDSSYTVVGAWVGVDNLPARP---CV 161
++W L+G G H G+ L +DV + + +V + +P P +
Sbjct: 290 VAWHLFGMGNEIDVHTAFFH--GQMLTTRGHHTDVANIFPAT--FVTAEMVPWEPGTWLI 345
Query: 160 AWQRGVHYEDGIPTLQVLASCS---PVDLPGQQRRQVFLD 50
+ Q H+ DG+ L + SCS PVDL + RQ F++
Sbjct: 346 SCQVNSHFRDGMQALYKVKSCSMAPPVDLLTGKVRQYFIE 385
>BC011561-1|AAH11561.1| 1158|Homo sapiens hephaestin protein.
Length = 1158
Score = 31.5 bits (68), Expect = 2.5
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Frame = -2
Query: 331 LSWRLYGRGLVARCRHQQDHLGGRSLKQTAARSDVDSSYTVVGAWVGVDNLPARP---CV 161
++W L+G G H G+ L +DV + + +V + +P P +
Sbjct: 290 VAWHLFGMGNEIDVHTAFFH--GQMLTTRGHHTDVANIFPAT--FVTAEMVPWEPGTWLI 345
Query: 160 AWQRGVHYEDGIPTLQVLASCS---PVDLPGQQRRQVFLD 50
+ Q H+ DG+ L + SCS PVDL + RQ F++
Sbjct: 346 SCQVNSHFRDGMQALYKVKSCSMAPPVDLLTGKVRQYFIE 385
>AY358990-1|AAQ89349.1| 1160|Homo sapiens HEPH protein.
Length = 1160
Score = 31.5 bits (68), Expect = 2.5
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Frame = -2
Query: 331 LSWRLYGRGLVARCRHQQDHLGGRSLKQTAARSDVDSSYTVVGAWVGVDNLPARP---CV 161
++W L+G G H G+ L +DV + + +V + +P P +
Sbjct: 293 VAWHLFGMGNEIDVHTAFFH--GQMLTTRGHHTDVANIFPAT--FVTAEMVPWEPGTWLI 348
Query: 160 AWQRGVHYEDGIPTLQVLASCS---PVDLPGQQRRQVFLD 50
+ Q H+ DG+ L + SCS PVDL + RQ F++
Sbjct: 349 SCQVNSHFRDGMQALYKVKSCSMAPPVDLLTGKVRQYFIE 388
>AL157698-2|CAI41472.1| 1158|Homo sapiens hephaestin protein.
Length = 1158
Score = 31.5 bits (68), Expect = 2.5
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Frame = -2
Query: 331 LSWRLYGRGLVARCRHQQDHLGGRSLKQTAARSDVDSSYTVVGAWVGVDNLPARP---CV 161
++W L+G G H G+ L +DV + + +V + +P P +
Sbjct: 290 VAWHLFGMGNEIDVHTAFFH--GQMLTTRGHHTDVANIFPAT--FVTAEMVPWEPGTWLI 345
Query: 160 AWQRGVHYEDGIPTLQVLASCS---PVDLPGQQRRQVFLD 50
+ Q H+ DG+ L + SCS PVDL + RQ F++
Sbjct: 346 SCQVNSHFRDGMQALYKVKSCSMAPPVDLLTGKVRQYFIE 385
>AL157698-1|CAI41471.1| 891|Homo sapiens hephaestin protein.
Length = 891
Score = 31.5 bits (68), Expect = 2.5
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Frame = -2
Query: 331 LSWRLYGRGLVARCRHQQDHLGGRSLKQTAARSDVDSSYTVVGAWVGVDNLPARP---CV 161
++W L+G G H G+ L +DV + + +V + +P P +
Sbjct: 23 VAWHLFGMGNEIDVHTAFFH--GQMLTTRGHHTDVANIFPAT--FVTAEMVPWEPGTWLI 78
Query: 160 AWQRGVHYEDGIPTLQVLASCS---PVDLPGQQRRQVFLD 50
+ Q H+ DG+ L + SCS PVDL + RQ F++
Sbjct: 79 SCQVNSHFRDGMQALYKVKSCSMAPPVDLLTGKVRQYFIE 118
>AL030998-3|CAI42809.1| 811|Homo sapiens hephaestin protein.
Length = 811
Score = 31.5 bits (68), Expect = 2.5
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Frame = -2
Query: 331 LSWRLYGRGLVARCRHQQDHLGGRSLKQTAARSDVDSSYTVVGAWVGVDNLPARP---CV 161
++W L+G G H G+ L +DV + + +V + +P P +
Sbjct: 290 VAWHLFGMGNEIDVHTAFFH--GQMLTTRGHHTDVANIFPAT--FVTAEMVPWEPGTWLI 345
Query: 160 AWQRGVHYEDGIPTLQVLASCS---PVDLPGQQRRQVFLD 50
+ Q H+ DG+ L + SCS PVDL + RQ F++
Sbjct: 346 SCQVNSHFRDGMQALYKVKSCSMAPPVDLLTGKVRQYFIE 385
>AL030998-2|CAI42808.1| 1158|Homo sapiens hephaestin protein.
Length = 1158
Score = 31.5 bits (68), Expect = 2.5
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Frame = -2
Query: 331 LSWRLYGRGLVARCRHQQDHLGGRSLKQTAARSDVDSSYTVVGAWVGVDNLPARP---CV 161
++W L+G G H G+ L +DV + + +V + +P P +
Sbjct: 290 VAWHLFGMGNEIDVHTAFFH--GQMLTTRGHHTDVANIFPAT--FVTAEMVPWEPGTWLI 345
Query: 160 AWQRGVHYEDGIPTLQVLASCS---PVDLPGQQRRQVFLD 50
+ Q H+ DG+ L + SCS PVDL + RQ F++
Sbjct: 346 SCQVNSHFRDGMQALYKVKSCSMAPPVDLLTGKVRQYFIE 385
>AL030998-1|CAI42807.1| 891|Homo sapiens hephaestin protein.
Length = 891
Score = 31.5 bits (68), Expect = 2.5
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Frame = -2
Query: 331 LSWRLYGRGLVARCRHQQDHLGGRSLKQTAARSDVDSSYTVVGAWVGVDNLPARP---CV 161
++W L+G G H G+ L +DV + + +V + +P P +
Sbjct: 23 VAWHLFGMGNEIDVHTAFFH--GQMLTTRGHHTDVANIFPAT--FVTAEMVPWEPGTWLI 78
Query: 160 AWQRGVHYEDGIPTLQVLASCS---PVDLPGQQRRQVFLD 50
+ Q H+ DG+ L + SCS PVDL + RQ F++
Sbjct: 79 SCQVNSHFRDGMQALYKVKSCSMAPPVDLLTGKVRQYFIE 118
>AJ296162-1|CAC35365.2| 1158|Homo sapiens hephaestin protein.
Length = 1158
Score = 31.5 bits (68), Expect = 2.5
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Frame = -2
Query: 331 LSWRLYGRGLVARCRHQQDHLGGRSLKQTAARSDVDSSYTVVGAWVGVDNLPARP---CV 161
++W L+G G H G+ L +DV + + +V + +P P +
Sbjct: 290 VAWHLFGMGNEIDVHTAFFH--GQMLTTRGHHTDVANIFPAT--FVTAEMVPWEPGTWLI 345
Query: 160 AWQRGVHYEDGIPTLQVLASCS---PVDLPGQQRRQVFLD 50
+ Q H+ DG+ L + SCS PVDL + RQ F++
Sbjct: 346 SCQVNSHFRDGMQALYKVKSCSMAPPVDLLTGKVRQYFIE 385
>AF148860-1|AAK08131.1| 1158|Homo sapiens hephaestin protein.
Length = 1158
Score = 31.5 bits (68), Expect = 2.5
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Frame = -2
Query: 331 LSWRLYGRGLVARCRHQQDHLGGRSLKQTAARSDVDSSYTVVGAWVGVDNLPARP---CV 161
++W L+G G H G+ L +DV + + +V + +P P +
Sbjct: 290 VAWHLFGMGNEIDVHTAFFH--GQMLTTRGHHTDVANIFPAT--FVTAEMVPWEPGTWLI 345
Query: 160 AWQRGVHYEDGIPTLQVLASCS---PVDLPGQQRRQVFLD 50
+ Q H+ DG+ L + SCS PVDL + RQ F++
Sbjct: 346 SCQVNSHFRDGMQALYKVKSCSMAPPVDLLTGKVRQYFIE 385
>AB014598-1|BAA31673.2| 1104|Homo sapiens KIAA0698 protein protein.
Length = 1104
Score = 31.5 bits (68), Expect = 2.5
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Frame = -2
Query: 331 LSWRLYGRGLVARCRHQQDHLGGRSLKQTAARSDVDSSYTVVGAWVGVDNLPARP---CV 161
++W L+G G H G+ L +DV + + +V + +P P +
Sbjct: 236 VAWHLFGMGNEIDVHTAFFH--GQMLTTRGHHTDVANIFPAT--FVTAEMVPWEPGTWLI 291
Query: 160 AWQRGVHYEDGIPTLQVLASCS---PVDLPGQQRRQVFLD 50
+ Q H+ DG+ L + SCS PVDL + RQ F++
Sbjct: 292 SCQVNSHFRDGMQALYKVKSCSMAPPVDLLTGKVRQYFIE 331
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,017,636
Number of Sequences: 237096
Number of extensions: 1855524
Number of successful extensions: 5836
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5833
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -