Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2044
         (629 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001400-1|AAN71155.1|  733|Drosophila melanogaster GH06606p pro...    74   1e-13
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical...    74   1e-13
U23420-1|AAB03640.1| 1607|Drosophila melanogaster unknown protein.     65   6e-11
AY119280-1|AAM51140.1| 1015|Drosophila melanogaster SD27140p pro...    65   6e-11
AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein.       57   2e-08

>BT001400-1|AAN71155.1|  733|Drosophila melanogaster GH06606p
           protein.
          Length = 733

 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 36/93 (38%), Positives = 52/93 (55%)
 Frame = +2

Query: 35  FWSRWVKEYLPTLLPRKIDGRAAGEDLQCGDTVLIVDSTLPRNTWPRGQVVHTYPGPDNR 214
           F +RW +EYL  L  R    +    +LQ  D V++ +  LP N W  G++V  +PG D R
Sbjct: 640 FSARWKEEYLKELHKRS-KWQFPTRNLQADDMVVVKEDNLPPNEWRLGRIVSAFPGADER 698

Query: 215 VRTVDVRTSGGLLKRPASKMILLVPATSDEPTP 313
           +R V++RTS G +KRP  K+ILL     +   P
Sbjct: 699 IRVVEIRTSRGTIKRPVHKVILLPMEDKESSVP 731


>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
            protein protein.
          Length = 1830

 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 36/93 (38%), Positives = 52/93 (55%)
 Frame = +2

Query: 35   FWSRWVKEYLPTLLPRKIDGRAAGEDLQCGDTVLIVDSTLPRNTWPRGQVVHTYPGPDNR 214
            F +RW +EYL  L  R    +    +LQ  D V++ +  LP N W  G++V  +PG D R
Sbjct: 1737 FSARWKEEYLKELHKRS-KWQFPTRNLQADDMVVVKEDNLPPNEWRLGRIVSAFPGADER 1795

Query: 215  VRTVDVRTSGGLLKRPASKMILLVPATSDEPTP 313
            +R V++RTS G +KRP  K+ILL     +   P
Sbjct: 1796 IRVVEIRTSRGTIKRPVHKVILLPMEDKESSVP 1828


>U23420-1|AAB03640.1| 1607|Drosophila melanogaster unknown protein.
          Length = 1607

 Score = 65.3 bits (152), Expect = 6e-11
 Identities = 33/89 (37%), Positives = 49/89 (55%)
 Frame = +2

Query: 17   QRMADHFWSRWVKEYLPTLLPRKIDGRAAGEDLQCGDTVLIVDSTLPRNTWPRGQVVHTY 196
            Q M   FW RW  EYL T L  +       E+L+    V++ +  LP + W  G++   +
Sbjct: 1517 QAMVQGFWKRWHMEYL-TSLHERTKWHLETENLKIDTLVVLKEPNLPPSKWILGRITAVH 1575

Query: 197  PGPDNRVRTVDVRTSGGLLKRPASKMILL 283
             G DN+VR V V+T+ GL KRP +K+ +L
Sbjct: 1576 AGIDNKVRVVTVKTAHGLYKRPIAKIAVL 1604


>AY119280-1|AAM51140.1| 1015|Drosophila melanogaster SD27140p protein.
          Length = 1015

 Score = 65.3 bits (152), Expect = 6e-11
 Identities = 33/89 (37%), Positives = 49/89 (55%)
 Frame = +2

Query: 17   QRMADHFWSRWVKEYLPTLLPRKIDGRAAGEDLQCGDTVLIVDSTLPRNTWPRGQVVHTY 196
            Q M   FW RW  EYL T L  +       E+L+    V++ +  LP + W  G++   +
Sbjct: 925  QAMVQGFWKRWHMEYL-TSLHERTKWHLETENLKIDTLVVLKEPNLPPSKWILGRITAVH 983

Query: 197  PGPDNRVRTVDVRTSGGLLKRPASKMILL 283
             G DN+VR V V+T+ GL KRP +K+ +L
Sbjct: 984  AGIDNKVRVVTVKTAHGLYKRPIAKIAVL 1012


>AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein.
          Length = 2360

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
 Frame = +2

Query: 8    RVAQRMADHFWSRWVKEYLPTLLPRKIDGRAAGEDLQCGDTVLIVDSTLPRNTWPRGQVV 187
            R+ Q++   FW +W  EYL TL  R    +    +++ G  VL+ D       WP G+V 
Sbjct: 1663 RLIQKIKKDFWVKWKSEYLHTLQQRN-KWKKEIPNIEEGQIVLLKDENCHPARWPLGKVE 1721

Query: 188  HTYPGPDNRVRTVDVRTSGGLLKRPASKMILLVPATS-DEPTPIESPRQGVGAT 346
              + G D++VR   V+   G + RP +K+  L    S D+    + P++   AT
Sbjct: 1722 KVHKGNDDKVRVAKVKMQEGYITRPITKICPLEGIKSVDKNEADQEPKRRTRAT 1775


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,668,740
Number of Sequences: 53049
Number of extensions: 557384
Number of successful extensions: 1961
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1959
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)