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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2041
         (760 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical pr...    56   2e-08
AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical...    56   2e-08
U61949-2|AAB03152.1|  884|Caenorhabditis elegans Puromycin-sensi...    54   1e-07
U61949-1|AAY44009.1|  948|Caenorhabditis elegans Puromycin-sensi...    54   1e-07
Z77669-5|CAK12563.1|  976|Caenorhabditis elegans Hypothetical pr...    52   6e-07
Z77669-4|CAB01242.1|  988|Caenorhabditis elegans Hypothetical pr...    52   6e-07
Z69794-3|CAA93680.1|  747|Caenorhabditis elegans Hypothetical pr...    50   2e-06
Z77662-8|CAB01196.1|  206|Caenorhabditis elegans Hypothetical pr...    48   1e-05
Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical pr...    45   7e-05
AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical ...    44   1e-04
Z77662-6|CAB01195.1|  210|Caenorhabditis elegans Hypothetical pr...    43   2e-04
Z69794-2|CAA93681.1|  786|Caenorhabditis elegans Hypothetical pr...    37   0.018
U61944-6|ABP49529.1|  529|Caenorhabditis elegans Hypothetical pr...    36   0.024
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr...    32   0.51 
AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical...    32   0.51 
Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical pr...    31   0.89 
AF025465-8|AAO38628.1|  233|Caenorhabditis elegans Hypothetical ...    31   1.2  
Z46812-2|CAA86844.1| 1027|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z74030-11|CAA98446.1|  481|Caenorhabditis elegans Hypothetical p...    28   6.3  
Z71262-8|CAA95812.1|  302|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z92827-2|CAB07327.2|  394|Caenorhabditis elegans Hypothetical pr...    28   8.3  
AF000191-1|AAB52884.1|  533|Caenorhabditis elegans Hypothetical ...    28   8.3  

>Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical
           protein F49B2.6 protein.
          Length = 1082

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 1/195 (0%)
 Frame = +3

Query: 102 EEVSASHIIKARSIDLNNAYGLAMETRLEKIVEPTGYKLDLEPFLDDGVYRGTVKIQLKW 281
           EE S    +KA     N  +     +RL +  EP  Y L L P L +G    +V I++  
Sbjct: 176 EEQSGEKFVKANKECTNITW---YSSRLPRTAEPIDYDLTLHPNLTNGEVEASVSIRILI 232

Query: 282 LQESDELSLHCDHELGISFWDVQAYPASDAEHPVERVVVKELRMDVKKPILTLYFEKPIP 461
             ++  L L+ ++ L +  +D+    A      V+  V+ +    + K +          
Sbjct: 233 KNDTKLLILNAEN-LEMKSFDITKKGAKVKADFVKCAVMTQWAWKLAKRL---------H 282

Query: 462 KGTEGHIELTYRGNIHM-GVTEGFFKSTYTTDQGEEIMVAATQLRPNNARRMFPCFDEPG 638
           KG   HI LT   +  M    +G + ST+    G++   AATQ  P  AR+M PCFDEP 
Sbjct: 283 KGD--HIVLTIYYSAQMKSDLQGLYFSTHLGTDGKKTKSAATQFEPTFARKMLPCFDEPN 340

Query: 639 IQDPVRNQRSTTPEH 683
            +   +      P H
Sbjct: 341 FKATFQVAIIRNPHH 355


>AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical
           protein F49B2.6 protein.
          Length = 1082

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 1/195 (0%)
 Frame = +3

Query: 102 EEVSASHIIKARSIDLNNAYGLAMETRLEKIVEPTGYKLDLEPFLDDGVYRGTVKIQLKW 281
           EE S    +KA     N  +     +RL +  EP  Y L L P L +G    +V I++  
Sbjct: 176 EEQSGEKFVKANKECTNITW---YSSRLPRTAEPIDYDLTLHPNLTNGEVEASVSIRILI 232

Query: 282 LQESDELSLHCDHELGISFWDVQAYPASDAEHPVERVVVKELRMDVKKPILTLYFEKPIP 461
             ++  L L+ ++ L +  +D+    A      V+  V+ +    + K +          
Sbjct: 233 KNDTKLLILNAEN-LEMKSFDITKKGAKVKADFVKCAVMTQWAWKLAKRL---------H 282

Query: 462 KGTEGHIELTYRGNIHM-GVTEGFFKSTYTTDQGEEIMVAATQLRPNNARRMFPCFDEPG 638
           KG   HI LT   +  M    +G + ST+    G++   AATQ  P  AR+M PCFDEP 
Sbjct: 283 KGD--HIVLTIYYSAQMKSDLQGLYFSTHLGTDGKKTKSAATQFEPTFARKMLPCFDEPN 340

Query: 639 IQDPVRNQRSTTPEH 683
            +   +      P H
Sbjct: 341 FKATFQVAIIRNPHH 355


>U61949-2|AAB03152.1|  884|Caenorhabditis elegans
           Puromycin-sensitive aminopeptidaseprotein 1, isoform a
           protein.
          Length = 884

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 43/152 (28%), Positives = 67/152 (44%)
 Frame = +3

Query: 180 RLEKIVEPTGYKLDLEPFLDDGVYRGTVKIQLKWLQESDELSLHCDHELGISFWDVQAYP 359
           RL    EPT Y + L P L+   + G   I +   + +D L +H    L      +Q+  
Sbjct: 15  RLPTFAEPTHYNVRLSPCLNQFSFDGHATIDVTIKEATDVLKVHAQSLL------IQS-- 66

Query: 360 ASDAEHPVERVVVKELRMDVKKPILTLYFEKPIPKGTEGHIELTYRGNIHMGVTEGFFKS 539
            S    P +     E   D K  ILT+     + +  +  ++  + G ++  +  GF++S
Sbjct: 67  VSLITQPGDASKSLETSYDDKLNILTIKLPTTM-QPQKVQLDFKFVGELNDKM-RGFYRS 124

Query: 540 TYTTDQGEEIMVAATQLRPNNARRMFPCFDEP 635
            Y    G E  +A+TQ     AR  FPCFDEP
Sbjct: 125 QYKDKNGTEKFLASTQFESTYARYAFPCFDEP 156


>U61949-1|AAY44009.1|  948|Caenorhabditis elegans
           Puromycin-sensitive aminopeptidaseprotein 1, isoform b
           protein.
          Length = 948

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 43/152 (28%), Positives = 67/152 (44%)
 Frame = +3

Query: 180 RLEKIVEPTGYKLDLEPFLDDGVYRGTVKIQLKWLQESDELSLHCDHELGISFWDVQAYP 359
           RL    EPT Y + L P L+   + G   I +   + +D L +H    L      +Q+  
Sbjct: 79  RLPTFAEPTHYNVRLSPCLNQFSFDGHATIDVTIKEATDVLKVHAQSLL------IQS-- 130

Query: 360 ASDAEHPVERVVVKELRMDVKKPILTLYFEKPIPKGTEGHIELTYRGNIHMGVTEGFFKS 539
            S    P +     E   D K  ILT+     + +  +  ++  + G ++  +  GF++S
Sbjct: 131 VSLITQPGDASKSLETSYDDKLNILTIKLPTTM-QPQKVQLDFKFVGELNDKM-RGFYRS 188

Query: 540 TYTTDQGEEIMVAATQLRPNNARRMFPCFDEP 635
            Y    G E  +A+TQ     AR  FPCFDEP
Sbjct: 189 QYKDKNGTEKFLASTQFESTYARYAFPCFDEP 220


>Z77669-5|CAK12563.1|  976|Caenorhabditis elegans Hypothetical
           protein T07F10.1b protein.
          Length = 976

 Score = 51.6 bits (118), Expect = 6e-07
 Identities = 21/37 (56%), Positives = 26/37 (70%)
 Frame = +3

Query: 525 GFFKSTYTTDQGEEIMVAATQLRPNNARRMFPCFDEP 635
           G +++TYT  +GE  M A TQ+ P  ARRM PCFDEP
Sbjct: 192 GLYQTTYTNSKGESKMAAVTQMEPVYARRMVPCFDEP 228


>Z77669-4|CAB01242.1|  988|Caenorhabditis elegans Hypothetical
           protein T07F10.1a protein.
          Length = 988

 Score = 51.6 bits (118), Expect = 6e-07
 Identities = 21/37 (56%), Positives = 26/37 (70%)
 Frame = +3

Query: 525 GFFKSTYTTDQGEEIMVAATQLRPNNARRMFPCFDEP 635
           G +++TYT  +GE  M A TQ+ P  ARRM PCFDEP
Sbjct: 204 GLYQTTYTNSKGESKMAAVTQMEPVYARRMVPCFDEP 240


>Z69794-3|CAA93680.1|  747|Caenorhabditis elegans Hypothetical
           protein R03G8.6 protein.
          Length = 747

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 9/180 (5%)
 Frame = +3

Query: 123 IIKARSIDLNNAYGLAMETRLEKIVEPTGYKLDLEPFL-------DDG--VYRGTVKIQL 275
           IIK  + +L+         RL + V P+ Y + ++ +L       D+    + G V I L
Sbjct: 12  IIKPFASELDARIADVASYRLPRHVSPSHYDIHIKTYLPGYGWKADENKITFEGNVNILL 71

Query: 276 KWLQESDELSLHCDHELGISFWDVQAYPASDAEHPVERVVVKELRMDVKKPILTLYFEKP 455
              + +D+L LH    L I    + A   SD ++    V +    +  +   LT Y    
Sbjct: 72  DIKETTDKLVLHSS-SLNI----ISATFQSDEQN----VSISHWNVQTESQFLTFYLNNT 122

Query: 456 IPKGTEGHIELTYRGNIHMGVTEGFFKSTYTTDQGEEIMVAATQLRPNNARRMFPCFDEP 635
           +   +   I++ ++G +      G F +  T + G  +   ATQ     AR M PCFDEP
Sbjct: 123 VKVQSSAGIQINFQGKVRTDGL-GLFATNSTREDGTVMTNFATQFETIFARNMIPCFDEP 181


>Z77662-8|CAB01196.1|  206|Caenorhabditis elegans Hypothetical
           protein F47B8.8 protein.
          Length = 206

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 5/153 (3%)
 Frame = +3

Query: 201 PTGYKLDLEPFLDDGVYRGTVKIQLKWLQESDELSLHCDHELGISFWDVQAYPASDAEHP 380
           PT Y L L+P + +  Y G V++  ++  E+ E+ +    +   +   +  + A   E P
Sbjct: 10  PTRYMLQLDPNMANKTYCGKVRVDYEFTAETSEIKIQASRDFQWTSIRLINFYAVYLECP 69

Query: 381 V-ERVVVKELRMDVKKPILTLYFEKPI-PKGTEG--HIELTYRGNIHM-GVTEGFFKSTY 545
           +   V+  +   D++  ILTL  + P+ P  T+   +IEL + G I + G T G F    
Sbjct: 70  IYASVLCDDYNHDLESEILTLSLDTPLTPDNTQNGFYIELEFTGPIIIAGQTTGLF---- 125

Query: 546 TTDQGEEIMVAATQLRPNNARRMFPCFDEPGIQ 644
             D+          ++  NA ++ PC++   I+
Sbjct: 126 AVDENS----ITANMKDGNAHKVAPCYEGVAIK 154


>Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical
           protein T16G12.1 protein.
          Length = 1890

 Score = 44.8 bits (101), Expect = 7e-05
 Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
 Frame = +3

Query: 249 YRGTVKIQLKWLQESDELSLHCDHELGISFWDVQAYPASDAEHPVERVVVKELRMDVKKP 428
           + G   IQ++ L  SD   L+  +      + +Q+Y   D +  V  V +  +  D    
Sbjct: 113 FDGRASIQVEALVASDRFILNAYN------FKIQSYKVVDIDGTV--VPINSISQDDTTQ 164

Query: 429 ILTLYFE-KPIPKGTEGHIELTYRGNIHMGVTEGFFKSTYTTDQGEEIMVAATQLRPNNA 605
            L+L      +  G   +IE  Y G I+     G + ++Y   QG    + AT + P +A
Sbjct: 165 QLSLITNANGVVAGQIYNIEFVYTGIINPYTDGGVYYTSYNDPQGNTHYMIATHMEPFSA 224

Query: 606 RRMFPCFDEP 635
           R++FP  DEP
Sbjct: 225 RKVFPSLDEP 234


>AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical
           protein Y42A5A.1 protein.
          Length = 1045

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 23/72 (31%), Positives = 39/72 (54%)
 Frame = +3

Query: 429 ILTLYFEKPIPKGTEGHIELTYRGNIHMGVTEGFFKSTYTTDQGEEIMVAATQLRPNNAR 608
           IL L  E  +  G    +++ ++  I++ +  G F + YT +  E   V ATQL+ + AR
Sbjct: 236 ILDLNLETDMIHGMNYTLDVAFKSAINLNLAYGLFAAPYTFEN-ETRYVVATQLQISEAR 294

Query: 609 RMFPCFDEPGIQ 644
            +FPC D P ++
Sbjct: 295 TVFPCIDVPDMK 306


>Z77662-6|CAB01195.1|  210|Caenorhabditis elegans Hypothetical
           protein F47B8.6 protein.
          Length = 210

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 5/148 (3%)
 Frame = +3

Query: 201 PTGYKLDLEPFLDDGVYRGTVKIQLKWLQESDELSLHCDHELGISFWDVQAYPASDAEHP 380
           P    L L+P L +  Y G VKI  ++  E+ E+ +    +   +   +  +   +   P
Sbjct: 10  PIKILLQLDPNLGNNSYNGRVKIDYEFTGETSEIKIQTSRDFQWTSVRLATFYDFNEGCP 69

Query: 381 VERVVVKELRM-DVKKPILTLYFEKPI-PKGTEG--HIELTYRGNIH-MGVTEGFFKSTY 545
           V   V  E  + D +  ILTL    P+ P+ TE   +IEL + G I+  G T G     Y
Sbjct: 70  VYASVDCENYVHDAESEILTLPLGNPLTPETTENGFYIELEWTGPINPQGETTGL----Y 125

Query: 546 TTDQGEEIMVAATQLRPNNARRMFPCFD 629
             D+          ++  NA ++FPC++
Sbjct: 126 AIDES----TIEANMKDGNAHKVFPCYE 149


>Z69794-2|CAA93681.1|  786|Caenorhabditis elegans Hypothetical
           protein R03G8.4 protein.
          Length = 786

 Score = 36.7 bits (81), Expect = 0.018
 Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
 Frame = +3

Query: 180 RLEKIVEPTGYKLDLEPFL-------DDGVYR--GTVKIQLKWLQESDELSLHCDHELGI 332
           RL + V PT Y+L +  FL       D+  +   G VKIQ++  +E+D + LH D  L I
Sbjct: 31  RLPRNVFPTEYRLHITTFLPGYKWEADEKSFTFIGDVKIQIEVKEETDTIVLHTD-SLNI 89

Query: 333 SFWDVQAYPASDAEHPVERVVVKELRMDVKKPILTLYFEKPIPKGTEGHIELTYR-GNIH 509
           +  +V  + A    +   + +++  R+ + K      FE    + T     L  + G I 
Sbjct: 90  N--NVLLHNACVCANL--KNLIQYFRLAITK------FENR--QQTNSKYSLYGKIGKIR 137

Query: 510 MGVTEGFFKSTYTTDQGEEIMV-AATQLRPNNARRMFPCFDEP 635
               EG+++ T +    E  M  A TQ  P  AR M PCFDEP
Sbjct: 138 ED-GEGYYR-TISPGLNETTMYNAVTQFEPTAARFMVPCFDEP 178


>U61944-6|ABP49529.1|  529|Caenorhabditis elegans Hypothetical
           protein T12E12.6 protein.
          Length = 529

 Score = 36.3 bits (80), Expect = 0.024
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +3

Query: 570 MVAATQLRPNNARRMFPCFDEPGIQ 644
           ++  T L+PN+ARR+FPC D P ++
Sbjct: 20  LLYTTHLQPNHARRLFPCIDHPAVK 44


>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
           protein F29G6.1 protein.
          Length = 1170

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
 Frame = +3

Query: 396 VKELRMDVKKPILTLYFEKPIPK-GTEGHIELTYRGNIHMGVTEGFFKSTYTTDQGEEIM 572
           + E+ ++   P+   +F+ P P   T+G       GN+H  + E  +       +G +I 
Sbjct: 514 ILEIEIETTTPLDVAFFDCPKPNCPTDGQPVCDSAGNLHGNLCEFTYSRCIAASKGHQIH 573

Query: 573 VAATQLRPNNARRMFPCFDE 632
           +A  +   +      PC D+
Sbjct: 574 IATEENCISKEACQMPCTDD 593


>AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical
           protein Y67D8C.9 protein.
          Length = 1073

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 582 TQLRPNNARRMFPCFDEPGIQ 644
           T+  P  AR  FPC+DEPG++
Sbjct: 240 TKFEPTLARAFFPCWDEPGVK 260


>Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical
           protein AC3.5 protein.
          Length = 1090

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 18/87 (20%), Positives = 38/87 (43%)
 Frame = +3

Query: 390 VVVKELRMDVKKPILTLYFEKPIPKGTEGHIELTYRGNIHMGVTEGFFKSTYTTDQGEEI 569
           + V  +  D     +TL  ++ + KG+   +++ +   +      G  +  Y   +G+E 
Sbjct: 267 IKVTNIEFDENLEKVTLTLDQELKKGSTVVLKIPFTSKVSNN--NGLKEYKYKNSEGKEQ 324

Query: 570 MVAATQLRPNNARRMFPCFDEPGIQDP 650
            +  TQ   +  R +FP FD+   + P
Sbjct: 325 SMFTTQPSYSYLRHVFPSFDQEAFKAP 351


>AF025465-8|AAO38628.1|  233|Caenorhabditis elegans Hypothetical
           protein K02E7.4 protein.
          Length = 233

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
 Frame = -3

Query: 548 RVRRFEESLGDTHVNIASIRQLYMTFGSLGDRLFEIQSQYRL---FDVHTKLLHNDTFYW 378
           R+  F      THV + S+ + Y  F +  + +F+I +   L   F V   L +   FY+
Sbjct: 124 RLDNFVSEFLKTHVQMLSVEEQYKLFMNSTNFMFKISNLRSLNPDFQVFFVLKNLKMFYF 183

Query: 377 MFRVRCWIRLYIPKANAK 324
           + +++ ++  Y+P+   K
Sbjct: 184 LSQIQGFMFKYVPQKGTK 201


>Z46812-2|CAA86844.1| 1027|Caenorhabditis elegans Hypothetical
           protein ZK675.2 protein.
          Length = 1027

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = +3

Query: 69  LGACVAYSLPPEEVSASHIIKARSIDLNNAYGLAMETRLEKIVEPTGYKLDLE-PFLDDG 245
           L  C      P++  A+H+ K+ S D+N  YG+    R E I   T    +LE   +D  
Sbjct: 668 LRQCRGIEEDPDDFWATHVRKSVSCDIN--YGIRFTKRGEVIQLMTAIGAELERKLIDSK 725

Query: 246 VYRGTVKIQL 275
           +  G++ ++L
Sbjct: 726 LTAGSITLKL 735


>Z74030-11|CAA98446.1|  481|Caenorhabditis elegans Hypothetical
           protein D1054.13 protein.
          Length = 481

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
 Frame = +3

Query: 24  RIXTXMNIEVILLAALGACVAYSLPPEEVSASHIIKARSID--LNNAYGLAMETRLEKI 194
           RI      E++ +    +C A   P    + S I  A  +   +NNAYGL  E  + KI
Sbjct: 201 RIIEQRGEEILCVMTTTSCFAPRSPDNVEAISAICAAHDVPHLVNNAYGLQSEETIRKI 259


>Z71262-8|CAA95812.1|  302|Caenorhabditis elegans Hypothetical
           protein F22D6.10 protein.
          Length = 302

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +1

Query: 601 TRGVCSPASTSR-GYKTPFEISVARPRNMGGPXQYXDR--ENREXNRGTECXDGLL 759
           TRGV  P S  + G + P E    +P NMG P +Y D     +  N G +  DG++
Sbjct: 204 TRGVGQPGSPGQPGSRGP-EGPRGQPGNMGRPGEYGDAGPAGQPGNDGEQGPDGVV 258


>Z92827-2|CAB07327.2|  394|Caenorhabditis elegans Hypothetical
           protein C29F7.2 protein.
          Length = 394

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
 Frame = +3

Query: 315 DHELGISFWDV--QAYPASDAEHPVERVVVKELRMDVKKPILTLYFEK 452
           D   GI  W +  +  P  D  H +      E R ++ KP+L  YF+K
Sbjct: 268 DDIAGIIDWQITHRGSPMEDFHHIMSTCTSVENRKNLTKPLLDYYFDK 315


>AF000191-1|AAB52884.1|  533|Caenorhabditis elegans Hypothetical
           protein T23C6.3 protein.
          Length = 533

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 8/36 (22%), Positives = 17/36 (47%)
 Frame = -3

Query: 635 RLVEAGEHTPRVVWTKLCGCYHNLFTLICRVRRFEE 528
           +L E      + +W  +   YH +FT+ C+   + +
Sbjct: 246 QLQEYNNELKKDIWNNILAVYHQIFTMFCKYPEYAD 281


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,547,460
Number of Sequences: 27780
Number of extensions: 390498
Number of successful extensions: 1130
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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