Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2040
         (620 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase...    28   0.28 
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    27   0.48 
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         25   1.5  
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    25   1.9  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   2.6  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   4.5  
AF203339-1|AAF19834.1|  156|Anopheles gambiae immune-responsive ...    23   7.8  

>AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase
           protein.
          Length = 309

 Score = 27.9 bits (59), Expect = 0.28
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = -1

Query: 452 TVFQEVTPTYSGAGPAASRGPSLPPNSAADNNLHVSFFRKQYSISSTKCADTVILPVY 279
           T+    T   +  G  A     L P +   +N   SF+R + S+++  CA++VI  V+
Sbjct: 174 TILDTATEIQNEVGKEALLRGKLSPYNLLPSN-RTSFYRYEGSLTTPACAESVIWTVF 230


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 27.1 bits (57), Expect = 0.48
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 43  LLVDHKETFTNVFYNSALDDSDKIAYAYKNISMI 144
           L+ +    F  + ++  LDD D + Y YK+IS I
Sbjct: 68  LIFEWNVLFGMLLFSLKLDDYDDLVYRYKDISKI 101


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -1

Query: 509 SXSCVPVSKASRCPANTGATVFQEVTPTYSGAGPAASRGPSL 384
           S SC   +  S CP +  A+V     P  S   PA  + PS+
Sbjct: 246 SASCSSSAAGSLCPTSPPASVSNGEQPASSVGDPANPQQPSV 287


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 274 HRQLFDIVHELKPSPTEISLLECQFLSSNHLL*VQLWI 161
           H+Q+   VH+L    T + LLE  FLS   +L   L++
Sbjct: 237 HKQIIQYVHDLNSLVTHLCLLE--FLSFGMMLCALLFL 272


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -1

Query: 467 ANTGATVFQEVTPTYSGAGPAASRGPSLPPNSAADNNLHVS 345
           +N+G+      TPT  G G   S   +   +S++ NN HVS
Sbjct: 133 SNSGSATTTTTTPTNPGNGNGGSNNNNNSNSSSSCNN-HVS 172


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 307 HLVDEMLYCFLKNETCKLL 363
           H    +LYCF +N  CK L
Sbjct: 432 HNQQRILYCFCRNVECKEL 450


>AF203339-1|AAF19834.1|  156|Anopheles gambiae immune-responsive
           serpin-related proteinISerpF1 protein.
          Length = 156

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 19  ESGEMLEMLLVDHKETFTNVFYNSALDDSDKIAYAYKNIS 138
           E G +LE    D+K+   N+  N  +DD  ++   Y+ I+
Sbjct: 2   EFGLLLESAQQDNKDYDLNIATNFFVDDFIEVINKYQQIA 41


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,078
Number of Sequences: 2352
Number of extensions: 11051
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)