Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2028
         (560 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450 CY...    25   1.7  
AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450 CY...    25   2.2  
AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450 CY...    24   3.9  
DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        23   5.2  

>AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450
           CYPm3r9 protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 5/37 (13%)
 Frame = -3

Query: 303 FHYINHRWRSIKNISLPTY-----QILESTIIKAGRQ 208
           F+    +WRS++N   PT+     +++  TI+ AG+Q
Sbjct: 121 FNLEGQKWRSLRNKLSPTFTSGKMKMMFPTIVTAGKQ 157


>AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450
           CYP6M4 protein.
          Length = 424

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 10/37 (27%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
 Frame = -3

Query: 303 FHYINHRWRSIKNISLPTY-----QILESTIIKAGRQ 208
           F+   ++W+S++N   PT+     +++  T++ AG+Q
Sbjct: 61  FNLEGYKWKSLRNKITPTFTSGKMKMMFPTVVAAGKQ 97


>AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450
           CYP6M1 protein.
          Length = 503

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 10/37 (27%), Positives = 22/37 (59%), Gaps = 5/37 (13%)
 Frame = -3

Query: 303 FHYINHRWRSIKNISLPTY-----QILESTIIKAGRQ 208
           F+    +WR+++N   PT+     +++  T++ AG+Q
Sbjct: 122 FNLEGQKWRNLRNKMTPTFTSGKMKMMFPTVVAAGQQ 158


>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 11/50 (22%), Positives = 25/50 (50%)
 Frame = -1

Query: 545 QNTLLEYKQMHLRDIITQMRYVILRAENYIRKYYATVQDKMHKPN*SIVF 396
           Q+ LL+YKQ   ++++   R         ++KY++ +  + +    S+ F
Sbjct: 108 QDDLLQYKQQQQQNLLITDRIFYDTTVTLLQKYHSIIAARYNATTQSVDF 157


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,104
Number of Sequences: 2352
Number of extensions: 10271
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)