Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2028
(560 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-1558|AAF54840.3| 389|Drosophila melanogaster CG18530-P... 30 2.5
AY118573-1|AAM49942.1| 898|Drosophila melanogaster LD43055p pro... 29 3.3
AY060910-1|AAL28458.1| 285|Drosophila melanogaster GM05651p pro... 29 3.3
AE014297-1147|AAF54528.1| 892|Drosophila melanogaster CG6325-PA... 29 3.3
BT011358-1|AAR96150.1| 169|Drosophila melanogaster RE70427p pro... 29 4.3
AE014296-2782|AAN11738.1| 169|Drosophila melanogaster CG3948-PB... 29 4.3
AE014296-2781|AAN11737.1| 163|Drosophila melanogaster CG3948-PC... 29 4.3
AE014296-2780|AAF49428.2| 174|Drosophila melanogaster CG3948-PA... 29 4.3
AB037672-1|BAA90485.1| 174|Drosophila melanogaster nonclathrin ... 29 4.3
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 28 9.9
>AE014297-1558|AAF54840.3| 389|Drosophila melanogaster CG18530-PA
protein.
Length = 389
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 307 FFFHNTFLKTIIRLSCSMYIV-FYFEYFFLV 396
F FHN L I+R C +++V Y FF++
Sbjct: 212 FMFHNRILNKILRRICGLFVVRVYCSTFFMI 242
>AY118573-1|AAM49942.1| 898|Drosophila melanogaster LD43055p
protein.
Length = 898
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/87 (24%), Positives = 38/87 (43%)
Frame = +1
Query: 283 SMIDIVKLFFFHNTFLKTIIRLSCSMYIVFYFEYFFLVNTML*FGLCILSCTVA*YFRM* 462
S + I + F TF +I L C + Y ++ ++ +C LS T+
Sbjct: 706 SSVVITQHSFDLETFTYYVISLLCQKHQKIYNVFYDWAYEVI--SVCPLSQTIVCMLTAQ 763
Query: 463 FSARKITYRICVIMSRKCICLYSNKVF 543
FSAR IC+ + + C++ N+ +
Sbjct: 764 FSARDQPLAICIHCTGRMDCVFHNRQY 790
>AY060910-1|AAL28458.1| 285|Drosophila melanogaster GM05651p
protein.
Length = 285
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/87 (24%), Positives = 38/87 (43%)
Frame = +1
Query: 283 SMIDIVKLFFFHNTFLKTIIRLSCSMYIVFYFEYFFLVNTML*FGLCILSCTVA*YFRM* 462
S + I + F TF +I L C + Y ++ ++ +C LS T+
Sbjct: 99 SSVVITQHSFDLETFTYYVISLLCQKHQKIYNVFYDWAYEVI--SVCPLSQTIVCMLTAQ 156
Query: 463 FSARKITYRICVIMSRKCICLYSNKVF 543
FSAR IC+ + + C++ N+ +
Sbjct: 157 FSARDQPLAICIHCTGRMDCVFHNRQY 183
>AE014297-1147|AAF54528.1| 892|Drosophila melanogaster CG6325-PA
protein.
Length = 892
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/87 (24%), Positives = 38/87 (43%)
Frame = +1
Query: 283 SMIDIVKLFFFHNTFLKTIIRLSCSMYIVFYFEYFFLVNTML*FGLCILSCTVA*YFRM* 462
S + I + F TF +I L C + Y ++ ++ +C LS T+
Sbjct: 706 SSVVITQHSFDLETFTYYVISLLCQKHQKIYNVFYDWAYEVI--SVCPLSQTIVCMLTAQ 763
Query: 463 FSARKITYRICVIMSRKCICLYSNKVF 543
FSAR IC+ + + C++ N+ +
Sbjct: 764 FSARDQPLAICIHCTGRMDCVFHNRQY 790
>BT011358-1|AAR96150.1| 169|Drosophila melanogaster RE70427p
protein.
Length = 169
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = -2
Query: 550 NNKILY*NINRCIYVTLLHKCDMLFYVLKTTYGNTMLQYKTKCTSQTKASYLLKKNIQNK 371
N +I+ + C+Y + D+ FYV+ Y N ++ S +LKKN++ +
Sbjct: 53 NTEIIMLDGLTCVYKS---NVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKR 109
Query: 370 I 368
+
Sbjct: 110 L 110
>AE014296-2782|AAN11738.1| 169|Drosophila melanogaster CG3948-PB,
isoform B protein.
Length = 169
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = -2
Query: 550 NNKILY*NINRCIYVTLLHKCDMLFYVLKTTYGNTMLQYKTKCTSQTKASYLLKKNIQNK 371
N +I+ + C+Y + D+ FYV+ Y N ++ S +LKKN++ +
Sbjct: 53 NTEIIMLDGLTCVYKS---NVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKR 109
Query: 370 I 368
+
Sbjct: 110 L 110
>AE014296-2781|AAN11737.1| 163|Drosophila melanogaster CG3948-PC,
isoform C protein.
Length = 163
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = -2
Query: 550 NNKILY*NINRCIYVTLLHKCDMLFYVLKTTYGNTMLQYKTKCTSQTKASYLLKKNIQNK 371
N +I+ + C+Y + D+ FYV+ Y N ++ S +LKKN++ +
Sbjct: 42 NTEIIMLDGLTCVYKS---NVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKR 98
Query: 370 I 368
+
Sbjct: 99 L 99
>AE014296-2780|AAF49428.2| 174|Drosophila melanogaster CG3948-PA,
isoform A protein.
Length = 174
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = -2
Query: 550 NNKILY*NINRCIYVTLLHKCDMLFYVLKTTYGNTMLQYKTKCTSQTKASYLLKKNIQNK 371
N +I+ + C+Y + D+ FYV+ Y N ++ S +LKKN++ +
Sbjct: 53 NTEIIMLDGLTCVYKS---NVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKR 109
Query: 370 I 368
+
Sbjct: 110 L 110
>AB037672-1|BAA90485.1| 174|Drosophila melanogaster nonclathrin
coat protein zeta-COP protein.
Length = 174
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = -2
Query: 550 NNKILY*NINRCIYVTLLHKCDMLFYVLKTTYGNTMLQYKTKCTSQTKASYLLKKNIQNK 371
N +I+ + C+Y + D+ FYV+ Y N ++ S +LKKN++ +
Sbjct: 53 NTEIIMLDGLTCVYKS---NVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKR 109
Query: 370 I 368
+
Sbjct: 110 L 110
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 152 NTKSIIHFSDLPIIVQKSHCLPALII 229
NT + IH S+ P+IV KS +P+ I+
Sbjct: 49 NTSTFIHTSNGPLIVNKSIIIPSKIL 74
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,529,850
Number of Sequences: 53049
Number of extensions: 374808
Number of successful extensions: 724
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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