Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2025
(800 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 351 3e-97
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 351 3e-97
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 351 3e-97
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 351 3e-97
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 351 3e-97
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 351 3e-97
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 351 3e-97
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 350 8e-97
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 338 2e-93
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 315 3e-86
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 263 9e-71
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 198 3e-51
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 177 1e-44
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 177 1e-44
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 177 1e-44
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 173 9e-44
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 164 8e-41
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 120 2e-27
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 84 1e-16
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 46 4e-05
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 46 4e-05
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 6.8
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 6.8
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 6.8
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 6.8
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 28 8.9
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 28 8.9
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 351 bits (864), Expect = 3e-97
Identities = 173/210 (82%), Positives = 176/210 (83%)
Frame = +3
Query: 81 MCDEXVAALVVDNGSGMCKAGFAXDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 260
MCD+ VAALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 261 XKRGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVXPXEHPXLLTXAPLNPXANRXKM 440
KRGILTLKYPIEHGIVTNWDDM KIWHHTFYNELRV P EHP LLT APLNP ANR KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 441 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGGRCLPHRAHLRXIRTPPRHPGVW 620
TQIMFETFNTPAMYVAIQAVLSLYA GRTTGIVLDSG + H + P
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDG-VTHTVPIYEGYALPHAILRL 179
Query: 621 T*PGRDLTDYLMKILTERGYSFTTTGEREI 710
GRDLTDYLMKILTERGYSFTTT EREI
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREI 209
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +2
Query: 728 EXLXYVALDFXQEMGTAASSSS 793
E L YVALDF QEM TAASSSS
Sbjct: 215 EKLCYVALDFEQEMATAASSSS 236
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 351 bits (863), Expect = 3e-97
Identities = 172/210 (81%), Positives = 176/210 (83%)
Frame = +3
Query: 81 MCDEXVAALVVDNGSGMCKAGFAXDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 260
MCD+ VAALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 261 XKRGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVXPXEHPXLLTXAPLNPXANRXKM 440
KRGILTLKYPIEHGIVTNWDDM KIWHHTFYNELRV P EHP LLT APLNP ANR KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 441 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGGRCLPHRAHLRXIRTPPRHPGVW 620
TQIMFETFNTPAMYVAIQAVLSLYA GRTTG+VLDSG + H + P
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDG-VTHTVPIYEGYALPHAILRL 179
Query: 621 T*PGRDLTDYLMKILTERGYSFTTTGEREI 710
GRDLTDYLMKILTERGYSFTTT EREI
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREI 209
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +2
Query: 728 EXLXYVALDFXQEMGTAASSSS 793
E L YVALDF QEM TAASSSS
Sbjct: 215 EKLCYVALDFEQEMATAASSSS 236
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 351 bits (863), Expect = 3e-97
Identities = 172/210 (81%), Positives = 176/210 (83%)
Frame = +3
Query: 81 MCDEXVAALVVDNGSGMCKAGFAXDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 260
MCD+ VAALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 261 XKRGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVXPXEHPXLLTXAPLNPXANRXKM 440
KRGILTLKYPIEHGIVTNWDDM KIWHHTFYNELRV P EHP LLT APLNP ANR KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 441 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGGRCLPHRAHLRXIRTPPRHPGVW 620
TQIMFETFNTPAMYVAIQAVLSLYA GRTTG+VLDSG + H + P
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDG-VTHTVPIYEGYALPHAILRL 179
Query: 621 T*PGRDLTDYLMKILTERGYSFTTTGEREI 710
GRDLTDYLMKILTERGYSFTTT EREI
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREI 209
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +2
Query: 728 EXLXYVALDFXQEMGTAASSSS 793
E L YVALDF QEM TAASSSS
Sbjct: 215 EKLCYVALDFEQEMATAASSSS 236
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 351 bits (863), Expect = 3e-97
Identities = 172/210 (81%), Positives = 176/210 (83%)
Frame = +3
Query: 81 MCDEXVAALVVDNGSGMCKAGFAXDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 260
MCD+ VAALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 261 XKRGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVXPXEHPXLLTXAPLNPXANRXKM 440
KRGILTLKYPIEHGIVTNWDDM KIWHHTFYNELRV P EHP LLT APLNP ANR KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 441 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGGRCLPHRAHLRXIRTPPRHPGVW 620
TQIMFETFNTPAMYVAIQAVLSLYA GRTTG+VLDSG + H + P
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDG-VTHTVPIYEGYALPHAILRL 179
Query: 621 T*PGRDLTDYLMKILTERGYSFTTTGEREI 710
GRDLTDYLMKILTERGYSFTTT EREI
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREI 209
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +2
Query: 728 EXLXYVALDFXQEMGTAASSSS 793
E L YVALDF QEM TAASSSS
Sbjct: 215 EKLCYVALDFEQEMATAASSSS 236
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 351 bits (863), Expect = 3e-97
Identities = 172/210 (81%), Positives = 176/210 (83%)
Frame = +3
Query: 81 MCDEXVAALVVDNGSGMCKAGFAXDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 260
MCD+ VAALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 261 XKRGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVXPXEHPXLLTXAPLNPXANRXKM 440
KRGILTLKYPIEHGIVTNWDDM KIWHHTFYNELRV P EHP LLT APLNP ANR KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 441 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGGRCLPHRAHLRXIRTPPRHPGVW 620
TQIMFETFNTPAMYVAIQAVLSLYA GRTTG+VLDSG + H + P
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDG-VTHTVPIYEGYALPHAILRL 179
Query: 621 T*PGRDLTDYLMKILTERGYSFTTTGEREI 710
GRDLTDYLMKILTERGYSFTTT EREI
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREI 209
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +2
Query: 728 EXLXYVALDFXQEMGTAASSSS 793
E L YVALDF QEM TAASSSS
Sbjct: 215 EKLCYVALDFEQEMATAASSSS 236
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 351 bits (863), Expect = 3e-97
Identities = 172/210 (81%), Positives = 176/210 (83%)
Frame = +3
Query: 81 MCDEXVAALVVDNGSGMCKAGFAXDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 260
MCD+ VAALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 261 XKRGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVXPXEHPXLLTXAPLNPXANRXKM 440
KRGILTLKYPIEHGIVTNWDDM KIWHHTFYNELRV P EHP LLT APLNP ANR KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 441 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGGRCLPHRAHLRXIRTPPRHPGVW 620
TQIMFETFNTPAMYVAIQAVLSLYA GRTTG+VLDSG + H + P
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDG-VTHTVPIYEGYALPHAILRL 179
Query: 621 T*PGRDLTDYLMKILTERGYSFTTTGEREI 710
GRDLTDYLMKILTERGYSFTTT EREI
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREI 209
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +2
Query: 728 EXLXYVALDFXQEMGTAASSSS 793
E L YVALDF QEM TAASSSS
Sbjct: 215 EKLCYVALDFEQEMATAASSSS 236
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 351 bits (863), Expect = 3e-97
Identities = 172/210 (81%), Positives = 176/210 (83%)
Frame = +3
Query: 81 MCDEXVAALVVDNGSGMCKAGFAXDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 260
MCD+ VAALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 261 XKRGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVXPXEHPXLLTXAPLNPXANRXKM 440
KRGILTLKYPIEHGIVTNWDDM KIWHHTFYNELRV P EHP LLT APLNP ANR KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 441 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGGRCLPHRAHLRXIRTPPRHPGVW 620
TQIMFETFNTPAMYVAIQAVLSLYA GRTTG+VLDSG + H + P
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDG-VTHTVPIYEGYALPHAILRL 179
Query: 621 T*PGRDLTDYLMKILTERGYSFTTTGEREI 710
GRDLTDYLMKILTERGYSFTTT EREI
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREI 209
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +2
Query: 728 EXLXYVALDFXQEMGTAASSSS 793
E L YVALDF QEM TAASSSS
Sbjct: 215 EKLCYVALDFEQEMATAASSSS 236
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 350 bits (860), Expect = 8e-97
Identities = 171/210 (81%), Positives = 176/210 (83%)
Frame = +3
Query: 81 MCDEXVAALVVDNGSGMCKAGFAXDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 260
MCD+ VAAL++DNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 261 XKRGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVXPXEHPXLLTXAPLNPXANRXKM 440
KRGILTLKYPIEHGIVTNWDDM KIWHHTFYNELRV P EHP LLT APLNP ANR KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 441 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGGRCLPHRAHLRXIRTPPRHPGVW 620
TQIMFETFNTPAMYVAIQAVLSLYA GRTTGIVLDSG + H + P
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDG-VTHTVPIYEGYALPHAILRL 179
Query: 621 T*PGRDLTDYLMKILTERGYSFTTTGEREI 710
GRDLTDYLMKILTERGYSFTTT EREI
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREI 209
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +2
Query: 728 EXLXYVALDFXQEMGTAASSSS 793
E L YVALDF QEM TAASSSS
Sbjct: 215 EKLCYVALDFEQEMATAASSSS 236
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 338 bits (832), Expect = 2e-93
Identities = 164/208 (78%), Positives = 173/208 (83%)
Frame = +3
Query: 87 DEXVAALVVDNGSGMCKAGFAXDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQXK 266
+E +AALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ K
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 267 RGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVXPXEHPXLLTXAPLNPXANRXKMTQ 446
RGILTLKYPIEHGIVTNWDDM KIWHHTFYNELR+ P EHP LLT APLNP +NR KMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 447 IMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGGRCLPHRAHLRXIRTPPRHPGVWT* 626
IMFETFNTPAMYV IQAVLSLYA GRTTGIVLD+G + H + P
Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDG-VTHTVPIYEGYALPHAIQRLDL 180
Query: 627 PGRDLTDYLMKILTERGYSFTTTGEREI 710
GRDLTDY+MKILTERGY+FTTT EREI
Sbjct: 181 AGRDLTDYMMKILTERGYTFTTTAEREI 208
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +2
Query: 728 EXLXYVALDFXQEMGTAASSSS 793
E L YVA DF E+ AASSSS
Sbjct: 214 EKLCYVAHDFESELAAAASSSS 235
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 315 bits (773), Expect = 3e-86
Identities = 155/192 (80%), Positives = 159/192 (82%)
Frame = +3
Query: 135 KAGFAXDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQXKRGILTLKYPIEHGIVT 314
+AGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ KRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 315 NWDDMXKIWHHTFYNELRVXPXEHPXLLTXAPLNPXANRXKMTQIMFETFNTPAMYVAIQ 494
NWDDM KIWHHTFYNELRV P EHP LLT APLNP ANR KMTQIMFETFNTPAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 495 AVLSLYAXGRTTGIVLDSGGRCLPHRAHLRXIRTPPRHPGVWT*PGRDLTDYLMKILTER 674
AVLSLYA GRTTG+VLDSG + H + P GRDLTDYLMKILTER
Sbjct: 125 AVLSLYASGRTTGVVLDSGDG-VTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 183
Query: 675 GYSFTTTGEREI 710
GYSFTTT EREI
Sbjct: 184 GYSFTTTAEREI 195
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +2
Query: 728 EXLXYVALDFXQEMGTAASSSS 793
E L YVALDF QEM TAASSSS
Sbjct: 201 EKLCYVALDFEQEMATAASSSS 222
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 263 bits (645), Expect = 9e-71
Identities = 131/166 (78%), Positives = 134/166 (80%)
Frame = +3
Query: 213 MVGMGQKDSYVGDEAQXKRGILTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVXPXEHPX 392
MVGMGQKDSYVGDEAQ KRGILTLKYPIEHGIVTNWDDM KIWHHTFYNELRV P EHP
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 393 LLTXAPLNPXANRXKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGGRCLPHR 572
LLT APLNP ANR KMTQIMFETFNTPAMYVAIQAVLSLYA GRTTG+VLDSG + H
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDG-VTHT 119
Query: 573 AHLRXIRTPPRHPGVWT*PGRDLTDYLMKILTERGYSFTTTGEREI 710
+ P GRDLTDYLMKILTERGYSFTTT EREI
Sbjct: 120 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 165
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +2
Query: 728 EXLXYVALDFXQEMGTAASSSS 793
E L YVALDF QEM TAASSSS
Sbjct: 171 EKLCYVALDFEQEMATAASSSS 192
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 198 bits (484), Expect = 3e-51
Identities = 96/203 (47%), Positives = 130/203 (64%), Gaps = 1/203 (0%)
Frame = +3
Query: 105 LVVDNGSGMCKAGFAXDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQXKRGILTL 284
+V+DNGSG+ KAGFA + P+ F + VGRP++ VM G D ++G +A+ RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 285 KYPIEHGIVTNWDDMXKIWHHTF-YNELRVXPXEHPXLLTXAPLNPXANRXKMTQIMFET 461
+YP+EHGIV NW DM KIW + F ++L++ P EHP LLT APLNP NR + +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 462 FNTPAMYVAIQAVLSLYAXGRTTGIVLDSGGRCLPHRAHLRXIRTPPRHPGVWT*PGRDL 641
FN PA+Y+ +QAVLSLYA GRTTG+VLDSG + H + GRD+
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVLDSGDG-VTHAVPIVKGFAMKHAIQRMDLAGRDV 189
Query: 642 TDYLMKILTERGYSFTTTGEREI 710
T+YL +L GY F + E EI
Sbjct: 190 TEYLRVLLRREGYEFHRSNEFEI 212
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 177 bits (430), Expect = 1e-44
Identities = 81/86 (94%), Positives = 82/86 (95%)
Frame = +3
Query: 81 MCDEXVAALVVDNGSGMCKAGFAXDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 260
MCD+ VAALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 261 XKRGILTLKYPIEHGIVTNWDDMXKI 338
KRGILTLKYPIEHGIVTNWDDM KI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 177 bits (430), Expect = 1e-44
Identities = 81/86 (94%), Positives = 82/86 (95%)
Frame = +3
Query: 81 MCDEXVAALVVDNGSGMCKAGFAXDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 260
MCD+ VAALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 261 XKRGILTLKYPIEHGIVTNWDDMXKI 338
KRGILTLKYPIEHGIVTNWDDM KI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 177 bits (430), Expect = 1e-44
Identities = 81/86 (94%), Positives = 82/86 (95%)
Frame = +3
Query: 81 MCDEXVAALVVDNGSGMCKAGFAXDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 260
MCD+ VAALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 261 XKRGILTLKYPIEHGIVTNWDDMXKI 338
KRGILTLKYPIEHGIVTNWDDM KI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 173 bits (422), Expect = 9e-44
Identities = 79/83 (95%), Positives = 80/83 (96%)
Frame = +3
Query: 81 MCDEXVAALVVDNGSGMCKAGFAXDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 260
MCD+ VAALVVDNGSGMCKAGFA DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 261 XKRGILTLKYPIEHGIVTNWDDM 329
KRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 164 bits (398), Expect = 8e-41
Identities = 90/204 (44%), Positives = 124/204 (60%), Gaps = 3/204 (1%)
Frame = +3
Query: 105 LVVDNGSGMCKAGFAXDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQXKRGIL 278
+VVDNG+G K G+A + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 279 TLKYPIEHGIVTNWDDMXKIWHHTFYNE-LRVXPXEHPXLLTXAPLNPXANRXKMTQIMF 455
+ YP+++GIV NWDDM +W HTF E L + P E LLT PLNP +NR KM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 456 ETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGGRCLPHRAHLRXIRTPPRHPGVWT*PGR 635
E + ++YVA+QAVL+LYA G TG+V+DSG + H + GR
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDG-VTHICPVYEGFALHHLTRRLDIAGR 187
Query: 636 DLTDYLMKILTERGYSFTTTGERE 707
D+T YL+K+L +RGY+F + + E
Sbjct: 188 DITKYLIKLLLQRGYNFNHSADFE 211
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 120 bits (288), Expect = 2e-27
Identities = 80/234 (34%), Positives = 116/234 (49%), Gaps = 24/234 (10%)
Frame = +3
Query: 81 MCDEXVAALVVDNGSGMCKAGFAXDDAPRAVFPSI------VGRPRHQG------VMVGM 224
M + A V+DNG+G K G+A + P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 225 GQKDSYVGDEAQXKRGI-LTLKYPIEHGIVTNWDDMXKIWHHTFYNELRVXPXEHPXLLT 401
D ++GDEA T+KYPI HGIV +WD M + W + LR P +H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 402 XAPLNPXANRXKMTQIMFETFNTPAMYVAIQAVLSLYAXGRT--------TGIVLDSGG- 554
PLN NR +IMFE+FN P +Y+A+QAVL+L A + TG+V+DSG
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDG 180
Query: 555 --RCLPHRAHLRXIRTPPRHPGVWT*PGRDLTDYLMKILTERGYSFTTTGEREI 710
C+P A I + +H + GRD+T ++ +L +R ++ E+
Sbjct: 181 VTHCIP-VADGYVIGSCIKHIPI---AGRDITYFIQSLLRDREHTIPAEQSYEV 230
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 84.2 bits (199), Expect = 1e-16
Identities = 56/171 (32%), Positives = 84/171 (49%), Gaps = 17/171 (9%)
Frame = +3
Query: 90 EXVAALVVDNGSGMCKAGFAXDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QX 263
+ V+ LV D GS + GFA ++ P+ PS + Q+ GD + Q
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 264 KR------GILTLKYP---------IEHGIVTNWDDMXKIWHHTFYNELRVXPXEHPXLL 398
KR G + P ++ G++ +W+ KI H++ N L P EHP L
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 399 TXAPLNPXANRXKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSG 551
+ + N A R K+T+IMFE F PA Y++ VLS +A GRT G+++DSG
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSG 179
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 45.6 bits (103), Expect = 4e-05
Identities = 27/86 (31%), Positives = 42/86 (48%)
Frame = +3
Query: 96 VAALVVDNGSGMCKAGFAXDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQXKRGI 275
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 276 LTLKYPIEHGIVTNWDDMXKIWHHTF 353
++ PIE G V NWD +IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 45.6 bits (103), Expect = 4e-05
Identities = 27/86 (31%), Positives = 42/86 (48%)
Frame = +3
Query: 96 VAALVVDNGSGMCKAGFAXDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQXKRGI 275
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 276 LTLKYPIEHGIVTNWDDMXKIWHHTF 353
++ PIE G V NWD +IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 42.3 bits (95), Expect = 4e-04
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 2/153 (1%)
Frame = +3
Query: 105 LVVDNGSGMCKAGFAXDDA--PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQXKRGIL 278
L+++ GS +AG + P++ FP+I R + VG + R I
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240
Query: 279 TLKYPIEHGIVTNWDDMXKIWHHTFYNELRVXPXEHPXLLTXAPLNPXANRXKMTQIMFE 458
+E + D+ K EL+V P ++ LL+ P ++ QI E
Sbjct: 241 ATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298
Query: 459 TFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGGR 557
+ + Q L LYA TTG+V+D G R
Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGVVVDIGER 331
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 463 STRPPCTSPSKPCSRCTRXVVPPVSCWTPADGVSHT 570
ST P T+P P S T VPPV+ TP S T
Sbjct: 659 STTAP-TAPVNPTSPTTAPTVPPVTTTTPTTTTSTT 693
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 463 STRPPCTSPSKPCSRCTRXVVPPVSCWTPADGVSHT 570
ST P T+P P S T VPPV+ TP S T
Sbjct: 715 STTAP-TAPVNPTSPTTAPTVPPVTTTTPTTTTSTT 749
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 463 STRPPCTSPSKPCSRCTRXVVPPVSCWTPADGVSHT 570
ST P T+P P S T VPPV+ TP S T
Sbjct: 538 STTAP-TAPVNPTSPTTAPTVPPVTTTTPTTTTSTT 572
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.3 bits (60), Expect = 6.8
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = -2
Query: 337 IXSMSSQLVTIPCSMGYLRVRIPLLXCASSPT*ESFCPIPTITP*WRGLPTIEGN-TARG 161
I + ++ T+ S PL+ +SS S TITP +G+PT N
Sbjct: 442 ITPSTPKVSTLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPS 501
Query: 160 ASSXAXPALHIPEPLSTTNAATXSS 86
S+ P + STT A + +S
Sbjct: 502 TSNPTTPKSTVTASPSTTGATSTAS 526
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 442 PRSCSKHSTRPPCTSPSKPCSRCTRXVV 525
P + +K T P P+ PC CT VV
Sbjct: 730 PTTTTKRPTTIPGIDPNNPCMNCTNLVV 757
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 442 PRSCSKHSTRPPCTSPSKPCSRCTRXVV 525
P + +K T P P+ PC CT VV
Sbjct: 730 PTTTTKRPTTIPGIDPNNPCMNCTNLVV 757
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 442 PRSCSKHSTRPPCTSPSKPCSRCTRXVV 525
P + +K T P P+ PC CT VV
Sbjct: 730 PTTTTKRPTTIPGIDPNNPCMNCTNLVV 757
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 442 PRSCSKHSTRPPCTSPSKPCSRCTRXVV 525
P + +K T P P+ PC CT VV
Sbjct: 730 PTTTTKRPTTIPGIDPNNPCMNCTNLVV 757
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,086,571
Number of Sequences: 27780
Number of extensions: 310528
Number of successful extensions: 1091
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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