Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2023
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    25   3.0  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   7.0  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   7.0  
AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450 CY...    23   7.0  

>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = +1

Query: 418 PDQCLRARRVSMRVRIQAPHCAGALILVNCR*VSWRSGARSPAVPVIFTCQF 573
           P +C+   R S+  R+Q  H  G   ++ CR   W        +  I TCQ+
Sbjct: 75  PSKCVTIPR-SLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPIETCQY 125


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 91  SPAPIDILSLLPRMKYMLSPVH 26
           SP PI    LLP  +++L P H
Sbjct: 162 SPGPIHPAVLLPYPQHVLHPAH 183


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 91  SPAPIDILSLLPRMKYMLSPVH 26
           SP PI    LLP  +++L P H
Sbjct: 162 SPGPIHPAVLLPYPQHVLHPAH 183


>AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450
           CYPm3r5 protein.
          Length = 519

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +3

Query: 483 RRVNPSQLSLSKLEKRRALPRGPGDLYVSIQLN 581
           + ++P+ LS    E+ +A+P  PG + + I LN
Sbjct: 55  KSIHPAHLSQRFYEQYKAVPGSPGFVGLYIFLN 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,050
Number of Sequences: 2352
Number of extensions: 12061
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)