Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2015
(620 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 250 2e-65
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 204 1e-51
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 189 4e-47
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 178 8e-44
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 164 1e-39
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 163 2e-39
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 149 5e-35
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 140 2e-32
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 138 1e-31
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 130 2e-29
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 128 8e-29
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 125 7e-28
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 107 2e-22
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 107 3e-22
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 107 3e-22
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 105 6e-22
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 103 3e-21
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 95 2e-18
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 94 2e-18
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 93 4e-18
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 92 1e-17
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 90 5e-17
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 89 1e-16
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 88 1e-16
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 83 5e-15
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 83 7e-15
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 81 2e-14
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 80 5e-14
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 78 2e-13
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 77 5e-13
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 76 8e-13
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 74 3e-12
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 61 2e-08
UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1; ... 59 7e-08
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 56 5e-07
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 56 7e-07
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 40 0.048
UniRef50_Q8XPL8 Cluster: Putative surface-exposed adhesin protei... 33 4.2
UniRef50_A6EPW1 Cluster: Putative uncharacterized protein; n=1; ... 33 4.2
UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster ye... 33 5.5
UniRef50_Q1RK02 Cluster: Ankyrin repeat; n=2; Rickettsia bellii|... 32 9.6
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 32 9.6
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 250 bits (612), Expect = 2e-65
Identities = 121/167 (72%), Positives = 136/167 (81%)
Frame = +2
Query: 62 VKXXLATXKGPXGVLKXNFKHLAVDIRXVNPXLLXVDXWFGSKKELAAXXTVCSHVENMI 241
VK + T G G LK +FKHLA+D+ + L V+ WFG+KKELAA TVCSH+ENMI
Sbjct: 20 VKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFGTKKELAAVRTVCSHIENMI 79
Query: 242 KGVTKGXQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVTVVNSPKQK 421
KGVT G QYKMRAVYAHFPINCVT+E N++IEIRNFLG+KYIRRV+MAPGVTVVNS QK
Sbjct: 80 KGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQK 139
Query: 422 DELIIEXNSLEDVSSSAALIQQSTTVKXXDIXKFLDGLYVSEKTTVV 562
DELI+E N +E VS SAALIQQSTTVK DI KFLDGLYVSEKTTVV
Sbjct: 140 DELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 186
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 204 bits (499), Expect = 1e-51
Identities = 100/168 (59%), Positives = 123/168 (73%), Gaps = 2/168 (1%)
Frame = +2
Query: 62 VKXXLATXKGPXGVLKXNFKHLAVDIRXVNPXL--LXVDXWFGSKKELAAXXTVCSHVEN 235
+K KGP G L+ +F H+ V++ + L VD W+G++KELA T+CSHV+N
Sbjct: 20 LKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKWWGNRKELATVRTICSHVQN 79
Query: 236 MIKGVTKGXQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVTVVNSPK 415
MIKGVT G +YKMR+VYAHFPIN V E S++EIRNFLG+KYIRRV+M PGV S
Sbjct: 80 MIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQA 139
Query: 416 QKDELIIEXNSLEDVSSSAALIQQSTTVKXXDIXKFLDGLYVSEKTTV 559
QKDELI+E N +E VS+SAALIQQ+TTVK DI KFLDG+YVSEK TV
Sbjct: 140 QKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 189 bits (461), Expect = 4e-47
Identities = 93/175 (53%), Positives = 119/175 (68%), Gaps = 1/175 (0%)
Frame = +2
Query: 47 GLTXHVKXXLATXKGPXGVLKXNFKHLAVDIRXVNPXL-LXVDXWFGSKKELAAXXTVCS 223
G+T V + T +GP G L NFKHL +D + + L VD WFG+++ +AA T S
Sbjct: 15 GVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWFGTRRTMAAIRTAIS 74
Query: 224 HVENMIKGVTKGXQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVTVV 403
HV+N+I GVTKG +YKMR VYAHFPIN T N+ IEIRNFLG+K +R+V M GVT++
Sbjct: 75 HVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTIL 134
Query: 404 NSPKQKDELIIEXNSLEDVSSSAALIQQSTTVKXXDIXKFLDGLYVSEKTTVVLD 568
S K KDEL+++ N +E VS SAALI Q VK DI KFLDG+YVS+K T+ D
Sbjct: 135 RSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGTITED 189
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 178 bits (434), Expect = 8e-44
Identities = 81/170 (47%), Positives = 111/170 (65%)
Frame = +2
Query: 50 LTXHVKXXLATXKGPXGVLKXNFKHLAVDIRXVNPXLLXVDXWFGSKKELAAXXTVCSHV 229
+T VK GP G L +F H +VDI V L VD WFG++K++A T+ S +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSII 93
Query: 230 ENMIKGVTKGXQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVTVVNS 409
ENMI GVTKG +YKMR VYAHFPIN T+G ++EIRNF G+K +RR+++ G+T +
Sbjct: 94 ENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRN 153
Query: 410 PKQKDELIIEXNSLEDVSSSAALIQQSTTVKXXDIXKFLDGLYVSEKTTV 559
K KDE+++ NSLE +S S A IQ + +K D+ KFLDG+YVSE+ +
Sbjct: 154 EKAKDEIVLTGNSLELLSQSCATIQLRSAIKYKDVRKFLDGIYVSERNVL 203
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 164 bits (399), Expect = 1e-39
Identities = 82/171 (47%), Positives = 111/171 (64%)
Frame = +2
Query: 47 GLTXHVKXXLATXKGPXGVLKXNFKHLAVDIRXVNPXLLXVDXWFGSKKELAAXXTVCSH 226
G+T +K T GP G LK N +H+ ++++ + + W GS+K A +V S
Sbjct: 16 GVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKKQGNTIKFI-VWHGSRKHNACIRSVYSI 74
Query: 227 VENMIKGVTKGXQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVTVVN 406
+ NMI GVT+G +YKMR VYAHFPIN TE +++EIRNFLG++ R +K PGVTV
Sbjct: 75 INNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSI 134
Query: 407 SPKQKDELIIEXNSLEDVSSSAALIQQSTTVKXXDIXKFLDGLYVSEKTTV 559
S KDE+I+E NSLE+VS SAA I+Q V+ DI KFLDG+YVSE+ +
Sbjct: 135 SSAVKDEIILEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNI 185
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 163 bits (397), Expect = 2e-39
Identities = 87/176 (49%), Positives = 109/176 (61%), Gaps = 2/176 (1%)
Frame = +2
Query: 47 GLTXHVKXXLATXKGPXGVLKXNFKHLAVDIRXVNPXLLXVDXWFGSKKELAAXXTVCSH 226
G+T +K + GP G L N KH+ V VN L+ V G +K +AA TV S
Sbjct: 15 GVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNGGRKHVAALRTVKSL 74
Query: 227 VENMIKGVTKGXQYKMRAVYAHFPINC--VTTEGNSIIEIRNFLGDKYIRRVKMAPGVTV 400
V+NMI GVTKG +YKMR VYAHFPIN V +G IE+RNFLGDK IR V + GVT+
Sbjct: 75 VDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTI 134
Query: 401 VNSPKQKDELIIEXNSLEDVSSSAALIQQSTTVKXXDIXKFLDGLYVSEKTTVVLD 568
S KDE+++ NS+EDVS +AA +QQ V+ DI KFLDG+YVS K + D
Sbjct: 135 EFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIYVSHKGFITED 190
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 149 bits (361), Expect = 5e-35
Identities = 75/163 (46%), Positives = 94/163 (57%)
Frame = +2
Query: 62 VKXXLATXKGPXGVLKXNFKHLAVDIRXVNPXLLXVDXWFGSKKELAAXXTVCSHVENMI 241
+ + T KG G L +F H +DI N + V WF K A T+CSH+ENM
Sbjct: 19 INKRVVTVKGKKGTLVRDFSHAPLDITHANDTI-SVAVWFPRGKRNALPRTICSHIENMF 77
Query: 242 KGVTKGXQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVTVVNSPKQK 421
KGVT G +YKMR YAHFPI + N IEIRNF+ RR++ PGVT+ S K
Sbjct: 78 KGVTYGFEYKMRLAYAHFPIAATVVDNNKAIEIRNFMHQIKTRRIECLPGVTIAMSTNVK 137
Query: 422 DELIIEXNSLEDVSSSAALIQQSTTVKXXDIXKFLDGLYVSEK 550
DELI+ S+EDVS +AA I +S V D+ KFLDG YVS +
Sbjct: 138 DELILRGISIEDVSHTAARIHESLKVPNKDLRKFLDGCYVSSR 180
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 140 bits (339), Expect = 2e-32
Identities = 73/169 (43%), Positives = 102/169 (60%), Gaps = 9/169 (5%)
Frame = +2
Query: 89 GPXGVLKXNFKHLAVDI-------RXVNPX--LLXVDXWFGSKKELAAXXTVCSHVENMI 241
GP G L F+H VDI + P ++ +D W+G++++ A T+ SH++NMI
Sbjct: 30 GPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMWYGNRRDSAVVRTIASHIKNMI 89
Query: 242 KGVTKGXQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVTVVNSPKQK 421
GVTKG QYKMR VYAHFP+ V + I+++NFLG+K R ++M GV V K
Sbjct: 90 TGVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGEKRTRHIEMYDGVVV--KKLGK 147
Query: 422 DELIIEXNSLEDVSSSAALIQQSTTVKXXDIXKFLDGLYVSEKTTVVLD 568
DE+ +E N +E VS SAA I + V+ DI +FLDG+YVSEK + D
Sbjct: 148 DEICLEGNDVEKVSQSAANIHAANLVRNKDIRQFLDGVYVSEKCLIEND 196
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 138 bits (333), Expect = 1e-31
Identities = 70/157 (44%), Positives = 94/157 (59%), Gaps = 3/157 (1%)
Frame = +2
Query: 101 VLKXNFKHLAVDIRXVNPXL---LXVDXWFGSKKELAAXXTVCSHVENMIKGVTKGXQYK 271
V + + KH+ +D R + + W +K A T + V NMIKGVT G QYK
Sbjct: 92 VSQQSLKHMNLDARIIKSPAGQKIKFVVWHAGRKHAACLRTAQACVANMIKGVTVGFQYK 151
Query: 272 MRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVTVVNSPKQKDELIIEXNSL 451
MRAVYAHFPIN + EIRNFLG+K +R + M GVT+ QKD++++E N +
Sbjct: 152 MRAVYAHFPINIIIAGDKKSAEIRNFLGEKRVRNIAMLEGVTIQEDKAQKDQVLVEGNDI 211
Query: 452 EDVSSSAALIQQSTTVKXXDIXKFLDGLYVSEKTTVV 562
+ VS SAAL+ +T V+ DI KFLDG+Y + K TVV
Sbjct: 212 DLVSQSAALLHGATLVRNKDIRKFLDGIYCTGKDTVV 248
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 130 bits (315), Expect = 2e-29
Identities = 59/112 (52%), Positives = 77/112 (68%)
Frame = +2
Query: 47 GLTXHVKXXLATXKGPXGVLKXNFKHLAVDIRXVNPXLLXVDXWFGSKKELAAXXTVCSH 226
G+T VK + GP G LK +F+HL +++ V L V WFG +KE+AA TVCSH
Sbjct: 15 GVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFGVRKEIAAIRTVCSH 74
Query: 227 VENMIKGVTKGXQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKM 382
++NMIKGVTKG +YKMR+VYAHFPIN +G +EIRNFLG+K +R V +
Sbjct: 75 IQNMIKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKIVRPVPL 126
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 128 bits (310), Expect = 8e-29
Identities = 71/172 (41%), Positives = 98/172 (56%), Gaps = 10/172 (5%)
Frame = +2
Query: 65 KXXLATXKGPXGVLKXNFKHLAVDIRX---------VNPXLLXVDXWFGSKKELAAXXTV 217
K + KGP G L NF+H A+DI+ V + V W +K+ +V
Sbjct: 21 KSKVVKVKGPRGELTKNFRHSALDIQVQKKVNKKNNVAKSRVSVRMWQSYRKQRCQVNSV 80
Query: 218 CSHVENMIKGVTKGXQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVT 397
S + NMI+GVT G ++KM YAHFPI +EI+NFLG+K IR +K PGVT
Sbjct: 81 ASQIRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVEIKNFLGEKIIRTIKCLPGVT 140
Query: 398 VV-NSPKQKDELIIEXNSLEDVSSSAALIQQSTTVKXXDIXKFLDGLYVSEK 550
+ N ++K+ L ++ N L +VS + ALI Q+ VK DI +FLDG+YVSEK
Sbjct: 141 ITRNEAEEKNVLTLQGNDLNNVSLTCALIHQACAVKNKDIRQFLDGIYVSEK 192
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 125 bits (302), Expect = 7e-28
Identities = 63/155 (40%), Positives = 92/155 (59%), Gaps = 1/155 (0%)
Frame = +2
Query: 89 GPXGVLKXNFKHLAVDIRXVNPXL-LXVDXWFGSKKELAAXXTVCSHVENMIKGVTKGXQ 265
G G + +F+ + IR + + W KK+LA T+ SH+ NMI GV+ G +
Sbjct: 29 GSLGSIIRSFEKTQISIRYFEKKKEIILLLWMAGKKQLAKLNTIASHITNMIVGVSLGFE 88
Query: 266 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVTVVNSPKQKDELIIEXN 445
Y ++ +YAHFPIN T+ S +EIRNFLG+K IR++ M GV + + +KDE+ + +
Sbjct: 89 YILQPIYAHFPINLSITDDGSCLEIRNFLGEKRIRKIYMGQGVKIKKNEAKKDEISVFGS 148
Query: 446 SLEDVSSSAALIQQSTTVKXXDIXKFLDGLYVSEK 550
L VS +AA IQQS K D+ KFLDG+Y+ K
Sbjct: 149 DLNLVSLNAASIQQSCQAKNKDLRKFLDGIYIIMK 183
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 107 bits (258), Expect = 2e-22
Identities = 62/123 (50%), Positives = 78/123 (63%)
Frame = +2
Query: 191 KELAAXXTVCSHVENMIKGVTKGXQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIR 370
KELA T+CSHV+NMIKGV+ G +YK+R+VYAHFP+N V
Sbjct: 30 KELATVRTICSHVQNMIKGVSLGFRYKVRSVYAHFPLNVV-------------------- 69
Query: 371 RVKMAPGVTVVNSPKQKDELIIEXNSLEDVSSSAALIQQSTTVKXXDIXKFLDGLYVSEK 550
+M GV S QKDELI+E N E VS+SAALIQ++T V+ DI KF+DG+YVSEK
Sbjct: 70 --QMRTGVACSVSQAQKDELILEGNDTELVSNSAALIQKATAVENQDIRKFVDGIYVSEK 127
Query: 551 TTV 559
T+
Sbjct: 128 GTM 130
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 107 bits (256), Expect = 3e-22
Identities = 62/168 (36%), Positives = 94/168 (55%)
Frame = +2
Query: 47 GLTXHVKXXLATXKGPXGVLKXNFKHLAVDIRXVNPXLLXVDXWFGSKKELAAXXTVCSH 226
G+ V+ KGP G L+ K+ V I + + F KK++A T +H
Sbjct: 16 GVEVTVEGNTVKVKGPKGELQRELKYPGVQI-FTEDGKVVIYKEFPRKKDVAIVRTFKAH 74
Query: 227 VENMIKGVTKGXQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVTVVN 406
+ NMIKGVT+G +Y+++ VY+HFP+ V +G+ ++ I NFLG+K RR K+ PGVTV
Sbjct: 75 INNMIKGVTEGFKYRLKVVYSHFPMT-VKVQGDEVV-IENFLGEKNPRRAKILPGVTV-- 130
Query: 407 SPKQKDELIIEXNSLEDVSSSAALIQQSTTVKXXDIXKFLDGLYVSEK 550
+ E+ +E E V +AA I+Q+T + D F DG+Y+ EK
Sbjct: 131 -KVKGSEIEVEGIDKEAVGQTAANIEQATRITKWDRRVFQDGIYIVEK 177
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 107 bits (256), Expect = 3e-22
Identities = 63/168 (37%), Positives = 95/168 (56%)
Frame = +2
Query: 47 GLTXHVKXXLATXKGPXGVLKXNFKHLAVDIRXVNPXLLXVDXWFGSKKELAAXXTVCSH 226
G+ V+ KGP G L+ F + I + ++ F +K++A T +H
Sbjct: 16 GVEVTVEGYKVKVKGPKGELEREFFWPGIQIFTEDGNVVIYKD-FPRRKDVAIARTFAAH 74
Query: 227 VENMIKGVTKGXQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVTVVN 406
+ NMIKGVT+G YK++ VY+HFPI+ V +G+ +I I NFLG+K R+ K+ PGVTV
Sbjct: 75 IRNMIKGVTEGFTYKLKVVYSHFPIS-VKVQGDEVI-IENFLGEKAPRKAKILPGVTV-- 130
Query: 407 SPKQKDELIIEXNSLEDVSSSAALIQQSTTVKXXDIXKFLDGLYVSEK 550
+ E+I+E E V +AA I+Q+T + D F DG+Y+ EK
Sbjct: 131 -KVRGQEIIVEGIDKEAVGQTAANIEQATRITKWDRRIFQDGIYIVEK 177
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 105 bits (253), Expect = 6e-22
Identities = 62/159 (38%), Positives = 88/159 (55%), Gaps = 2/159 (1%)
Frame = +2
Query: 80 TXKGPXG-VLKXNFKH-LAVDIRXVNPXLLXVDXWFGSKKELAAXXTVCSHVENMIKGVT 253
T +GP G +++ +H L DI N + + W G +K +A TV S + N IK VT
Sbjct: 46 TFQGPKGSIVEDCTRHPLTFDIHEGN---IRIRLWNGKRKAMALAITVESLLRNAIKAVT 102
Query: 254 KGXQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVTVVNSPKQKDELI 433
G Y M+AVY HF IN E I+ ++NFLG+K ++R +M G V ++KD ++
Sbjct: 103 VGFAYTMKAVYNHFSINMEIKEDGKILLVKNFLGEKNVKRFRMR-GAARVRLDERKDTIV 161
Query: 434 IEXNSLEDVSSSAALIQQSTTVKXXDIXKFLDGLYVSEK 550
IE SL DVS SA I K D FLDG++V+E+
Sbjct: 162 IEGPSLSDVSQSAGTITNECKAKNRDSRVFLDGIFVTER 200
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 103 bits (247), Expect = 3e-21
Identities = 59/148 (39%), Positives = 78/148 (52%), Gaps = 2/148 (1%)
Frame = +2
Query: 104 LKXNFKHLAVDIRX-VNPXLLXVDXWFGSKKELAAXXTVCSHVENMIKGVTKGXQYKMRA 280
L + HL +D N + WFG++K LA T+ V+NMI GVT G +YKM
Sbjct: 41 LVKDLSHLKLDFEYDENDHQIVARCWFGNRKLLARIGTLFGIVKNMITGVTLGWRYKMHF 100
Query: 281 VYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVTV-VNSPKQKDELIIEXNSLED 457
VY+HFPI +E + F+G K + V GV + N KDE+ IE +LED
Sbjct: 101 VYSHFPIKHTCSEDGRTFDFNGFMGHKEHKIVTAPEGVRIWSNESVAKDEINIEGANLED 160
Query: 458 VSSSAALIQQSTTVKXXDIXKFLDGLYV 541
VS I Q T +K D+ KFLDG+YV
Sbjct: 161 VSLVCGQIHQLTKIKDKDLRKFLDGIYV 188
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 94.7 bits (225), Expect = 2e-18
Identities = 59/168 (35%), Positives = 93/168 (55%)
Frame = +2
Query: 47 GLTXHVKXXLATXKGPXGVLKXNFKHLAVDIRXVNPXLLXVDXWFGSKKELAAXXTVCSH 226
G++ + + T KGP G ++ F + + I V + VD K++ A T SH
Sbjct: 14 GVSVSLSQDVFTAKGPKGTVERTFWYPGIKIE-VREGEVVVDAESSRKEQKAMVGTFASH 72
Query: 227 VENMIKGVTKGXQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVTVVN 406
++N+I GV++G + KM VYAHFP+ V EG +++ I NFLG+K R K+ G T V
Sbjct: 73 LKNLIIGVSEGFECKMNIVYAHFPMQ-VKVEGKTLV-IGNFLGEKKPRIAKIL-GETKVK 129
Query: 407 SPKQKDELIIEXNSLEDVSSSAALIQQSTTVKXXDIXKFLDGLYVSEK 550
+E+++ + EDV +AA I+Q T +K D F DG+Y+ +K
Sbjct: 130 --VSGNEIVVSGINKEDVGQTAANIEQKTKIKRFDPRIFQDGIYIVQK 175
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 94.3 bits (224), Expect = 2e-18
Identities = 46/89 (51%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Frame = +2
Query: 89 GPXGVLKXNFKHLAVDIRXVNPXL-LXVDXWFGSKKELAAXXTVCSHVENMIKGVTKGXQ 265
G G L+ F+H+ VD++ V + V+ WFG K A TVCSH+ENMI GV + Q
Sbjct: 91 GKYGKLERTFRHIPVDMKLVEDGRKITVEMWFGLTKNKACIRTVCSHIENMITGVRQRYQ 150
Query: 266 YKMRAVYAHFPINCVTTEGNSIIEIRNFL 352
YK+R VYAHFPIN T S IEIRNFL
Sbjct: 151 YKLRFVYAHFPINSNITNDGSTIEIRNFL 179
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 93.5 bits (222), Expect = 4e-18
Identities = 58/168 (34%), Positives = 90/168 (53%)
Frame = +2
Query: 47 GLTXHVKXXLATXKGPXGVLKXNFKHLAVDIRXVNPXLLXVDXWFGSKKELAAXXTVCSH 226
G+ + + T GP G L + + +D+ V + V K+ LA T+ +H
Sbjct: 12 GVDVTLDGGVLTVSGPKGTLVRDMRFPQIDLM-VEGGEVVVSTASEKKRILAMTGTLEAH 70
Query: 227 VENMIKGVTKGXQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVTVVN 406
+NMI+GV G +Y+M+ VY+HFPI + +GN +EI NFLG+K R K+ GVTV
Sbjct: 71 AKNMIRGVADGYEYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEKQPRIAKIIEGVTVKI 128
Query: 407 SPKQKDELIIEXNSLEDVSSSAALIQQSTTVKXXDIXKFLDGLYVSEK 550
DE+ I E V ++AA I+ +T + D F DG+Y++E+
Sbjct: 129 G---NDEVTITGIDKEKVGNTAANIEHATRITKRDPRVFQDGIYITER 173
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 91.9 bits (218), Expect = 1e-17
Identities = 49/162 (30%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Frame = +2
Query: 86 KGPXGVLKXNFKHLAVDIRX-VNPXLLXVDXWFGSKKELAAXXTVCSHVENMIKGVTKGX 262
KGP G + +F + A IR +N + ++ F +++ A ++ +H++NMI G G
Sbjct: 31 KGPKGEVIKDFSY-AKGIRIQLNEGKIILETTFADRRKKALLYSIIAHIKNMITGTINGY 89
Query: 263 QYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVTVVNSPKQKDELIIEX 442
+Y ++ + HFPI+ V G+ +++ N +G+K IRR K+ PGV V + +++++E
Sbjct: 90 RYYLKVISTHFPIS-VKVSGDE-VQVSNLIGEKNIRRAKILPGVKVT---VKGEDIVVEG 144
Query: 443 NSLEDVSSSAALIQQSTTVKXXDIXKFLDGLYVSEKTTVVLD 568
+ + +V+ +AA I+ ST + D F DG+Y+ +K + L+
Sbjct: 145 SDIYNVAQTAANIESSTKIVGYDRRIFSDGIYIYKKEVIGLE 186
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 89.8 bits (213), Expect = 5e-17
Identities = 57/162 (35%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
Frame = +2
Query: 20 KSXSHKSQHGLTXHVKXXLATXKGPXGVLKXNFKHLA-VDIRXVNPXLLXVDXWFGSKKE 196
K+ S G+ HV +GP G ++ +F H + IR V + V+ + +KK+
Sbjct: 6 KTESVPIPEGVKVHVNGKRVEVEGPLGKVEKDFSHARRISIR-VEGNSVVVETFHATKKD 64
Query: 197 LAAXXTVCSHVENMIKGVTKGXQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRV 376
A T+ S + NMI GVTKG +YK++ VYAHFP++ + E + II I NFLG++ R
Sbjct: 65 YALVGTIASIINNMIIGVTKGYRYKLKIVYAHFPMS-LKVEKDKII-IENFLGERGKRIA 122
Query: 377 KMAPGVTVVNSPKQKDELIIEXNSLEDVSSSAALIQQSTTVK 502
+ PG V +KD++I+E L+ V+ +AA I +T ++
Sbjct: 123 GIMPGAKV---KIEKDDVIVEGIDLDAVAQTAANIHLATHLR 161
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 88.6 bits (210), Expect = 1e-16
Identities = 54/154 (35%), Positives = 81/154 (52%)
Frame = +2
Query: 89 GPXGVLKXNFKHLAVDIRXVNPXLLXVDXWFGSKKELAAXXTVCSHVENMIKGVTKGXQY 268
GP G K+ V I V + V KK A T H+EN+I GV +G +Y
Sbjct: 48 GPKGENTRYLKYRGVFIE-VGDGKVRVYTTSPKKKHKAMVGTFAGHIENLITGVKEGFEY 106
Query: 269 KMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVTVVNSPKQKDELIIEXNS 448
++ VYAHFPI V EGN +I I NF+G+K+ RR K+ V S + ++ +
Sbjct: 107 HLKVVYAHFPIK-VRVEGNEVI-IENFIGEKHPRRAKIVGRAQVEISGQ---DIYVRGID 161
Query: 449 LEDVSSSAALIQQSTTVKXXDIXKFLDGLYVSEK 550
+E+ +AA ++Q+T +K D F DG+Y+ +K
Sbjct: 162 IEECGQTAANLEQATKIKRKDPRVFQDGIYIVKK 195
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 88.2 bits (209), Expect = 1e-16
Identities = 55/155 (35%), Positives = 87/155 (56%)
Frame = +2
Query: 86 KGPXGVLKXNFKHLAVDIRXVNPXLLXVDXWFGSKKELAAXXTVCSHVENMIKGVTKGXQ 265
KG G +F+ + V IR ++ + + K++LA T S V N+ +GV G
Sbjct: 13 KGKLGSAHKSFRKIPVGIR-IDGSSVVLKAEGTRKRDLAILNTARSIVRNLCEGVGVGYT 71
Query: 266 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVTVVNSPKQKDELIIEXN 445
K++ VYAHFPI + +G I+ + NF G++ R+ K+ G VV+ + +++I+ +
Sbjct: 72 IKLKVVYAHFPIT-IKQDGAMIL-VENFQGERSARKAKIVGGTKVVS---KGEDVIVTGH 126
Query: 446 SLEDVSSSAALIQQSTTVKXXDIXKFLDGLYVSEK 550
L DVS +AA ++Q T VK D FLDG+YV EK
Sbjct: 127 VLTDVSQTAANLEQGTKVKNKDHRVFLDGVYVYEK 161
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 83.0 bits (196), Expect = 5e-15
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 2/165 (1%)
Frame = +2
Query: 62 VKXXLATXKGPXGVLKXNFKHLAVDI--RXVNPXLLXVDXWFGSKKELAAXXTVCSHVEN 235
+K KG G L F + V+I + + L V ++ +K A T+ S + N
Sbjct: 20 IKEKTIYTKGINGELSKKFNNKNVNIIYKKNDSNSLIVRCYYNNKSSSAIVRTITSIIYN 79
Query: 236 MIKGVTKGXQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVTVVNSPK 415
MI GV+KG Y ++ VY+HFPI+ + + +EI N G K I + V V +
Sbjct: 80 MIIGVSKGFTYLLKIVYSHFPISVKYIQNENTLEITNLFGLKRIDSFFIPSSVQVCTNNL 139
Query: 416 QKDELIIEXNSLEDVSSSAALIQQSTTVKXXDIXKFLDGLYVSEK 550
K E+I+ +E + ++LIQ ++ D F+DG+Y++ K
Sbjct: 140 NKKEIILLSKDIETLGILSSLIQNKCSINNKDCRVFIDGIYLASK 184
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 82.6 bits (195), Expect = 7e-15
Identities = 51/157 (32%), Positives = 83/157 (52%)
Frame = +2
Query: 80 TXKGPXGVLKXNFKHLAVDIRXVNPXLLXVDXWFGSKKELAAXXTVCSHVENMIKGVTKG 259
T +G G + + +D+ V+ + ++ + K ++ T SH+ENM GVT+G
Sbjct: 22 TVEGDNGSVTRRLWYPDIDVS-VDGDTVVIESDEDNAKTMSTIGTFQSHIENMFHGVTEG 80
Query: 260 XQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVTVVNSPKQKDELIIE 439
+Y M Y+HFP+ V EG+ ++ I NFLG+K RR + G T V +EL +
Sbjct: 81 WEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEKAPRRTTI-HGDTDVEI--DGEELTVS 135
Query: 440 XNSLEDVSSSAALIQQSTTVKXXDIXKFLDGLYVSEK 550
+E V +AA I+Q T + D+ F DG+Y++ K
Sbjct: 136 GPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRK 172
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 81.0 bits (191), Expect = 2e-14
Identities = 49/159 (30%), Positives = 85/159 (53%), Gaps = 5/159 (3%)
Frame = +2
Query: 89 GPXGVLKXNFKHLAVDIRXVNPXLLXVDXWFGSKKELAAXXTVCSHVENMIKGVTKGXQY 268
GP G ++ F H + + VN + ++ +F +++E T SH++NM++GV Y
Sbjct: 29 GPKGEVERKFYHPLIKLS-VNDNKIILETYFATRREKRLINTWRSHIKNMLEGVQNPFVY 87
Query: 269 KMRAVYAHFPINCVTTEGNSIIEIRNFLGDK--YIRRVKMAPGVTV-VNSPKQKDELIIE 439
+++ Y HFP+ V EGN +I + NFLG+K I+ + V V + K + E+++E
Sbjct: 88 RLKVCYTHFPMR-VKLEGNKLI-VENFLGEKAPIIKELPYLDKVKVKIEQNKDETEIVVE 145
Query: 440 XNSLEDVSSSAALIQQSTTV--KXXDIXKFLDGLYVSEK 550
E A++I+QST K D +F DG+++ K
Sbjct: 146 SPDKEKAGIVASMIEQSTRFLHKRKDRRRFTDGIWLYYK 184
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 79.8 bits (188), Expect = 5e-14
Identities = 53/168 (31%), Positives = 86/168 (51%)
Frame = +2
Query: 47 GLTXHVKXXLATXKGPXGVLKXNFKHLAVDIRXVNPXLLXVDXWFGSKKELAAXXTVCSH 226
G+T + +GP G NF+++ V I + + + K++ A T S
Sbjct: 18 GVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIADGKV-NLKTIGERKRDYAILHTARSI 76
Query: 227 VENMIKGVTKGXQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVTVVN 406
+ N+ +G+ +G KM+ V+AHFPI V EG I+ I NF G++ R + V+
Sbjct: 77 IRNICEGLVEGYTIKMKVVFAHFPIT-VKVEGKKIL-IENFQGERAPRSTHIMGNTKVI- 133
Query: 407 SPKQKDELIIEXNSLEDVSSSAALIQQSTTVKXXDIXKFLDGLYVSEK 550
PK +D +++ D++ +AA I+ +T VK D FLDG+YV EK
Sbjct: 134 -PKGED-VLLTGEVWTDITQTAANIELTTKVKNKDHRVFLDGIYVYEK 179
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 77.8 bits (183), Expect = 2e-13
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 1/158 (0%)
Frame = +2
Query: 80 TXKGPXGVLKXNFKHLAVDIRXVNPXLLXVDXWFGSKKELAAXXTVCSHVENMIKGVTKG 259
T KGP G + F + V + V + + ++++ A + +++ENM KGVT+G
Sbjct: 44 TVKGPKGEVTKEFYYPDVYL-WVEDDEVVIAATRSNRRQKAILGMIKAYIENMQKGVTEG 102
Query: 260 XQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMA-PGVTVVNSPKQKDELII 436
+YK++ VY+HFP + + I NF+G+ R ++ P T V Q ++I+
Sbjct: 103 HEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGENVPRVAEIVDPENTEV--IVQGQDIIV 160
Query: 437 EXNSLEDVSSSAALIQQSTTVKXXDIXKFLDGLYVSEK 550
E V +AA ++Q+T +K D F DG+Y+ EK
Sbjct: 161 RGIDKEAVGQTAANLEQATYIKDRDPRVFQDGIYIVEK 198
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 76.6 bits (180), Expect = 5e-13
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 2/170 (1%)
Frame = +2
Query: 47 GLTXHVKXXLATXKGPXGVLKXNFKHLAVDIRXVNPXLLXVDXWFGSKKELAAXXTVCSH 226
G+T V T L F+H +++R + L V KKE A T +H
Sbjct: 16 GVTAAVNGNDVTVAKDGNSLTREFRHPRIEVRDSSGEL-EVFVNLPRKKEKALAGTWAAH 74
Query: 227 VENMIKGVTKGXQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAP--GVTV 400
+ NM +GV G +YK++AVY+HFP+ + GN + + N G+K + RV P V
Sbjct: 75 LTNMARGVDSGFEYKLKAVYSHFPMT-IRVNGNQ-MTVTNLFGEK-VPRVAALPWSPAEV 131
Query: 401 VNSPKQKDELIIEXNSLEDVSSSAALIQQSTTVKXXDIXKFLDGLYVSEK 550
+ K ++ + E V +AA I++S +K D F DG+Y+ K
Sbjct: 132 EVKVQNKTDVTVSGADREKVGQTAANIERSCRIKNRDRRVFQDGIYIVSK 181
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 75.8 bits (178), Expect = 8e-13
Identities = 46/136 (33%), Positives = 75/136 (55%)
Frame = +2
Query: 86 KGPXGVLKXNFKHLAVDIRXVNPXLLXVDXWFGSKKELAAXXTVCSHVENMIKGVTKGXQ 265
KGP G + FK+ V + + + ++ + K+E A T ++NM GVT+G +
Sbjct: 33 KGPLGEVTKEFKNTPV-VMSLQDGKIVMEVFKARKREYAILGTYKGILKNMFLGVTRGWR 91
Query: 266 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVTVVNSPKQKDELIIEXN 445
YK++ +Y HFP+ V +GN ++ I NFLG K + + GV V K K++++IE
Sbjct: 92 YKLKVIYTHFPM-LVKVQGNQLV-IENFLGRKSKITLNIPKGVKV--EVKGKEDIVIEGI 147
Query: 446 SLEDVSSSAALIQQST 493
E VS+ AA +Q +T
Sbjct: 148 DRELVSTFAAAVQAAT 163
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 73.7 bits (173), Expect = 3e-12
Identities = 41/122 (33%), Positives = 71/122 (58%)
Frame = +2
Query: 185 SKKELAAXXTVCSHVENMIKGVTKGXQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKY 364
+ +E T S + NM+KG+ +G QY+M+ Y+HFP+ V+ +G +++ I NF G++
Sbjct: 60 NSRERGIVGTWASEISNMVKGLKEGFQYEMKIDYSHFPMR-VSVKGKTVV-IENFFGERS 117
Query: 365 IRRVKMAPGVTVVNSPKQKDELIIEXNSLEDVSSSAALIQQSTTVKXXDIXKFLDGLYVS 544
R ++ G T V+ + D L + S +DV +AA I+++T +K D F DG+Y+
Sbjct: 118 PRTAEIV-GETQVS--VKGDRLFLNGPSKKDVGETAANIERATIIKGFDPRVFQDGIYLI 174
Query: 545 EK 550
K
Sbjct: 175 SK 176
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 61.3 bits (142), Expect = 2e-08
Identities = 34/107 (31%), Positives = 59/107 (55%)
Frame = +2
Query: 221 SHVENMIKGVTKGXQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVTV 400
S + +I+GVTKG +Y M+ + HFP+ V+ G+ +I + NFLG+K R K+ G V
Sbjct: 72 SETKLLIEGVTKGFEYHMKIDFTHFPMR-VSVRGDKLI-VENFLGEKSPRSAKIVDGCKV 129
Query: 401 VNSPKQKDELIIEXNSLEDVSSSAALIQQSTTVKXXDIXKFLDGLYV 541
+ D + I + +AA I+++T ++ D F DG+++
Sbjct: 130 ---SVKGDRITINGIDKRKIGETAANIERATYIRHFDARVFQDGIFL 173
>UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 140
Score = 59.3 bits (137), Expect = 7e-08
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Frame = -2
Query: 562 HNSCFLRYIKTIQELXDIXXLDCSRLLDESSRARDIFQGVAFND*FILLFGRVNDSHTRC 383
+N R I TIQE DI D + LL+ SS R+ FQGV N+ FILL R T
Sbjct: 21 NNGTSFRNINTIQEFTDILVSDTTDLLNISSILRNSFQGVTRNNQFILLSRRNFHGDTFM 80
Query: 382 HLYPSDVFIPQEVTYLNN*ITL--SGDTVNGEVSIHSTHLVLXAFSYSFNHV 233
S+ F QE++ N +T+ + VN E+ I+ +HLV FS + + V
Sbjct: 81 DFNFSNSFFTQEISNFNVILTIFFNNVNVNWEMRINKSHLVFVTFSDTSDQV 132
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 56.4 bits (130), Expect = 5e-07
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = +2
Query: 62 VKXXLATXKGPXGVLKXNFKHLAVDIRXVNPXL--LXVDXWFGSKKELAAXXTVCSHVEN 235
+K KGP G L +F H+ V++ + L VD W+G++KELA T+CS V+N
Sbjct: 20 LKGRTVIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKWWGNRKELATVHTICSPVQN 79
Query: 236 MIKGVTKG 259
IK VT G
Sbjct: 80 TIKWVTLG 87
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 56.0 bits (129), Expect = 7e-07
Identities = 32/84 (38%), Positives = 47/84 (55%)
Frame = +2
Query: 182 GSKKELAAXXTVCSHVENMIKGVTKGXQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDK 361
G KELA +H+++ + G Y+MR+VYA FP N + E S+IE + +G K
Sbjct: 12 GLTKELANQ----NHLQSCSEHDQGGFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKK 67
Query: 362 YIRRVKMAPGVTVVNSPKQKDELI 433
YI RV++ V S QK+EL+
Sbjct: 68 YIHRVQIRTSVAFYASQAQKNELM 91
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 39.9 bits (89), Expect = 0.048
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +2
Query: 86 KGPXGVLKXNFKHLAVDIRXV--NPXLLXVDXWFGSKKELAAXXTVCSHVENMIKGV 250
K G L+ +F H+ +++R + L VD W + K LA T+ SHV+NMIK V
Sbjct: 22 KDTRGTLQRDFNHINIELRLLAKRKKQLQVDKWLKTMK-LATAHTIYSHVQNMIKRV 77
>UniRef50_Q8XPL8 Cluster: Putative surface-exposed adhesin protein;
n=1; Ralstonia solanacearum|Rep: Putative
surface-exposed adhesin protein - Ralstonia solanacearum
(Pseudomonas solanacearum)
Length = 1309
Score = 33.5 bits (73), Expect = 4.2
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 443 NSLEDVSSSAALIQQSTTVKXXDIXKFLDG 532
NS++ +SSSA+L+QQS K + K LDG
Sbjct: 150 NSIKSISSSASLVQQSAAGKDITVAKDLDG 179
>UniRef50_A6EPW1 Cluster: Putative uncharacterized protein; n=1;
unidentified eubacterium SCB49|Rep: Putative
uncharacterized protein - unidentified eubacterium SCB49
Length = 378
Score = 33.5 bits (73), Expect = 4.2
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = -3
Query: 477 RAAELETSSKELXSMINSSFCLGELTTVTPGAIFTLLMYLSPKKLRISIIELPSVVTQL 301
RAAEL T+ +++ + N F GEL T T + L PKKL I I + + Q+
Sbjct: 35 RAAELATAKRQVEILSNGIFANGELPTFAKKIKETNQLPLRPKKLEILQINVGYMCNQV 93
>UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster
yellows phytoplasma|Rep: 50S ribosomal protein L6 -
Aster yellows phytoplasma
Length = 175
Score = 33.1 bits (72), Expect = 5.5
Identities = 31/134 (23%), Positives = 57/134 (42%), Gaps = 1/134 (0%)
Frame = +2
Query: 86 KGPXGVLKXNFKHLAVDIRXV-NPXLLXVDXWFGSKKELAAXXTVCSHVENMIKGVTKGX 262
KGP G L + + DI + N + V KK A + NMIKGV+ G
Sbjct: 35 KGPLGKLN---QEIIGDINIIINHNNIIVKRKHNDKKNRALHGLYRMLIYNMIKGVSNGF 91
Query: 263 QYKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVTVVNSPKQKDELIIEX 442
+ K+ + F N + N I+ + +G + +K+ +T+ + ++I++
Sbjct: 92 KKKLELIGVGFRAN-INNNNNQILNLN--IGYSHNIMIKLPQSITLEVKMDKNPQIILKS 148
Query: 443 NSLEDVSSSAALIQ 484
+ + AA I+
Sbjct: 149 YDKQLLGIVAAKIR 162
>UniRef50_Q1RK02 Cluster: Ankyrin repeat; n=2; Rickettsia
bellii|Rep: Ankyrin repeat - Rickettsia bellii (strain
RML369-C)
Length = 629
Score = 32.3 bits (70), Expect = 9.6
Identities = 17/90 (18%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +2
Query: 134 DIRXVNPXLLXVDXWFGSKKELAAXXTVCSHVENMIKGVTKGXQYKMRAVYAHFPI-NCV 310
D R L+ D KK++ A + CS ++N + + + K+R + +PI
Sbjct: 508 DRRKAVESLVKYDNDLNKKKDITATLSYCSAIDNSFRAIDRNNLSKLRVLLDVYPILQEK 567
Query: 311 TTEGNSIIEIRNFLGDKYIRRVKMAPGVTV 400
+G++++ + + Y+ + + G+ +
Sbjct: 568 NNKGDTLLTAAVYKDNYYLAKYLVIRGIKI 597
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 32.3 bits (70), Expect = 9.6
Identities = 33/133 (24%), Positives = 59/133 (44%)
Frame = +2
Query: 86 KGPXGVLKXNFKHLAVDIRXVNPXLLXVDXWFGSKKELAAXXTVCSHVENMIKGVTKGXQ 265
KGP G L F H ++I+ V +L V K+ A T S + NM++GV+KG +
Sbjct: 28 KGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKEHRALHGTTRSLLGNMVEGVSKGFE 85
Query: 266 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGDKYIRRVKMAPGVTVVNSPKQKDELIIEXN 445
+ V + + GN ++ L Y V++ P + + +++++
Sbjct: 86 RGLELVGVGYR---ASKSGNKLV-----LNVGYSHPVEIVPEEGIEIEVPSQTKVVVKGT 137
Query: 446 SLEDVSSSAALIQ 484
E V + AA I+
Sbjct: 138 DKERVGAIAANIR 150
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,994,131
Number of Sequences: 1657284
Number of extensions: 7324716
Number of successful extensions: 13131
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 12897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13103
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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