Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2014
(700 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1263 + 35316083-35316185,35317167-35317220,35317665-353179... 50 2e-06
09_04_0618 + 18988614-18989102,18989913-18990314,18990555-189908... 47 1e-05
10_08_0511 + 18435745-18436499,18436624-18436742,18436788-184373... 46 2e-05
10_08_0493 + 18299885-18299892,18300201-18300837,18301254-183016... 45 5e-05
03_03_0131 - 14706123-14706171,14706364-14706422,14706504-147067... 42 4e-04
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 41 8e-04
02_01_0198 + 1334563-1334994,1335872-1335919,1336096-1336351,133... 41 8e-04
08_01_0080 + 566509-566746,566904-567151,567347-567532,567639-56... 41 0.001
03_05_0388 + 23726957-23727418,23730016-23730262,23731072-237312... 38 0.008
08_01_0673 - 5805218-5805349,5805936-5806026,5806416-5806471,580... 38 0.010
01_01_0956 + 7505206-7505322,7505860-7506723,7506841-7507260,750... 37 0.018
10_08_0948 + 21754985-21755290,21756042-21756297,21756845-217569... 36 0.041
06_02_0257 - 13533689-13533714,13533799-13533925,13534013-135341... 35 0.054
12_02_0998 + 25126114-25126596,25129213-25129339,25129349-251294... 35 0.071
06_03_0766 - 24425486-24426245,24430766-24430855,24430951-244310... 35 0.071
10_07_0195 + 13972656-13972970,13973518-13973848,13975312-139754... 33 0.16
02_01_0703 + 5251901-5251950,5252783-5253554 33 0.16
07_03_0173 - 14721369-14721503,14722542-14722629,14723580-147237... 29 4.7
07_03_1772 + 29411874-29413218,29413355-29413421,29413749-294138... 28 6.2
06_01_1195 + 10280864-10280979,10281024-10281115,10281211-102821... 28 8.2
>02_05_1263 +
35316083-35316185,35317167-35317220,35317665-35317903,
35317989-35318089,35318390-35318583,35318885-35319003,
35319624-35319749,35320081-35320142,35320265-35320348,
35320580-35320664
Length = 388
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/67 (31%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Frame = +3
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA--PXSSERIVXLIGKPDSIVS 542
+R L+ + AGC+IGK GS I E + ++GAR+++ + P +++RI+ + G D ++
Sbjct: 61 LRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVIK 120
Query: 543 GVRXVLD 563
+ +L+
Sbjct: 121 AMELILE 127
Score = 35.1 bits (77), Expect = 0.054
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +3
Query: 381 IHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS--APXSSERIVXLIGKPDSIVSGVRX 554
I G V+G+AG I E+ + +GAR+KI +SER V + G ++I +
Sbjct: 291 IADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTITGTSEAIQAAESM 350
Query: 555 VLDLV 569
++ V
Sbjct: 351 IMQRV 355
>09_04_0618 +
18988614-18989102,18989913-18990314,18990555-18990806,
18991564-18991941,18992350-18992426,18992700-18992808,
18993424-18993574,18993810-18993903,18997072-18997474,
18997590-18997742,18998115-18998474
Length = 955
Score = 47.2 bits (107), Expect = 1e-05
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 6/129 (4%)
Frame = +3
Query: 216 ITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDV--RMLIHQ 389
I P+ ERV+ I+A ++ ++ + H++ D+ V R+L+
Sbjct: 279 IIEPNSDSEERVIVISAHENSEMMH--SPAQDAVLRVHSRISESSMDKSSAVTARLLVPS 336
Query: 390 SRAGCVIGKAGSKIKELREKTGARLKIFSN-SAPXSSER---IVXLIGKPDSIVSGVRXV 557
GC++GK GS I E+R+ TGA ++IF N P ++R +V + G SI + +
Sbjct: 337 QHIGCLLGKGGSIIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHI 396
Query: 558 LDLVXXVPI 584
+ V I
Sbjct: 397 TGRIRDVII 405
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 7/58 (12%)
Frame = +3
Query: 327 HNQGGSRM-GDQELDV------RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSN 479
H GG G++E +V RML + GCV+GK G ++ +R+++GA++++F N
Sbjct: 90 HRVGGDEAAGEEEREVPGVVGCRMLAASGQVGCVLGKGGKTVERMRQESGAQIRVFRN 147
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +3
Query: 354 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDS 533
+QE+ RM+ G +IGK GS I+ L+ +TGA +KI ++ S ER++ + +S
Sbjct: 241 EQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNS-DSEERVIVISAHENS 299
>10_08_0511 +
18435745-18436499,18436624-18436742,18436788-18437372,
18438534-18438667,18439128-18439148,18439656-18439739,
18439832-18440077,18440763-18440925,18441024-18441066,
18441392-18441773,18442212-18442267,18442351-18442417,
18442542-18442721
Length = 944
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/80 (22%), Positives = 47/80 (58%)
Frame = +3
Query: 243 ERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAG 422
ER++ ++++ E + + + L H++ + + +L R+++ ++ GC++G+ G
Sbjct: 557 ERLIVVSSQ--EIPDDPVSPTIEALILLHSKASTLAENHQLTTRLVVPSNKVGCILGEGG 614
Query: 423 SKIKELREKTGARLKIFSNS 482
I E+R +TGA ++++S +
Sbjct: 615 KVITEMRRRTGAEIRVYSKA 634
>10_08_0493 +
18299885-18299892,18300201-18300837,18301254-18301676,
18301769-18302014,18302124-18302789,18303228-18303283,
18303367-18303460,18303559-18303738
Length = 769
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/80 (23%), Positives = 46/80 (57%)
Frame = +3
Query: 243 ERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAG 422
ER++ ++++ E + + + L H++ + + L R+++ ++ GC+IG+ G
Sbjct: 347 ERLIVVSSQ--EIPDDPVSPTIEALILLHSKVSTLAENHHLTTRLVVPSNKVGCIIGEGG 404
Query: 423 SKIKELREKTGARLKIFSNS 482
I E+R +TGA ++++S +
Sbjct: 405 KVITEMRRRTGAEIRVYSKA 424
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = +3
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
V I S VIG G + E+R+ +GAR+K+ + P SSE IV + G PD +
Sbjct: 685 VEFRIPNSYLESVIGAGGVNLAEIRQISGARVKL-HEAHPGSSESIVEIQGIPDQV 739
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Frame = +3
Query: 372 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIF-SNSAP---XSSERIVXLIG 521
R+L+ ++ GC++GK GS I++LR TGA +++ S + P S+ +V + G
Sbjct: 165 RILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISG 218
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +3
Query: 357 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGK--PD 530
+E +++L G VIGK+G ++++ ++TGA +++ S ER++ + + PD
Sbjct: 300 EEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPD 359
Query: 531 SIVS 542
VS
Sbjct: 360 DPVS 363
>03_03_0131 -
14706123-14706171,14706364-14706422,14706504-14706770,
14706857-14707114,14707207-14707629,14707942-14708514
Length = 542
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +3
Query: 351 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSN 479
G ++ VR+L+ + GC+IGK G I+ +R TGA +++ SN
Sbjct: 134 GLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSN 176
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +3
Query: 372 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFS 476
R+L+ SR GC+IGK GS I E+R + A ++I S
Sbjct: 368 RLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILS 402
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Frame = +3
Query: 372 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP---XSSERIVXLIGKPDSIVS 542
+M I ++ G VIGK G IK ++ K+GAR+++ P ++ER V + G + I +
Sbjct: 261 QMKIANNKVGLVIGKGGETIKSMQAKSGARIQVVPLHLPPGDPATERTVYIDGTQEQIET 320
Query: 543 GVRXVLDLVXXVPIXGPI 596
+ V+++ PI
Sbjct: 321 AKQLVIEVTNVQSSLAPI 338
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +3
Query: 333 QGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFS--NSAPXSSERI 506
Q S G Q + I R G +IGK+G IK L+ ++GA++++ ++ P S R
Sbjct: 154 QYSSYGGYQGTSKTIEIPNGRVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRP 213
Query: 507 VXLIGKPDSI 536
V L G PD I
Sbjct: 214 VELSGTPDQI 223
>02_01_0198 +
1334563-1334994,1335872-1335919,1336096-1336351,
1336733-1336881,1336969-1337097,1337425-1337592,
1338416-1338610
Length = 458
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Frame = +3
Query: 357 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSN----SAPXSSERIVXLIGK 524
++ ++L+ ++A +IGK G +IK ++E TGA +KI S ERIV + G
Sbjct: 205 EKCSAKLLVPSAQATHLIGKQGVRIKSIQETTGATVKIIDKVELLSYDVVDERIVDIHGA 264
Query: 525 PDSIVSGVRXVLDLV 569
P ++ ++ VL ++
Sbjct: 265 PLKVLHALKSVLGVL 279
Score = 35.5 bits (78), Expect = 0.041
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3
Query: 372 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIV 509
R+++ + G +IG+ G IK L E T AR+++ +A ++ RIV
Sbjct: 100 RLVVATDKVGGLIGRRGDTIKRLCEDTRARVRVLEAAAAAAANRIV 145
>08_01_0080 +
566509-566746,566904-567151,567347-567532,567639-567734,
567836-567907,567990-568106,570531-571676
Length = 700
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +3
Query: 336 GGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXS---SERI 506
G + G ++ + ML+ ++ G +IGK G IK L+ ++GAR+++ P +ER
Sbjct: 239 GSGQSGSEQFE--MLVPDNKVGLIIGKGGETIKTLQTRSGARIQLIPQHPPEGVTLTERT 296
Query: 507 VXLIGKPDSI 536
V + G I
Sbjct: 297 VRITGNKKQI 306
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +3
Query: 333 QGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSS--ERI 506
+GG G QE + + ++ G +IGK+G I+ L+ +GA+++I ++ ++ R
Sbjct: 143 EGGGAPG-QETSRIINVPNNKVGVLIGKSGETIRNLQMNSGAKIQITKDAEADANAPTRS 201
Query: 507 VXLIGKPDSIVSGVRXVLDLVXXVPIXG 590
V L+G +SI R + +++ G
Sbjct: 202 VELVGTLESIDKAERLIKNVIAEADAGG 229
>03_05_0388 +
23726957-23727418,23730016-23730262,23731072-23731220,
23731313-23731597,23731665-23731889,23734251-23734445
Length = 520
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +3
Query: 372 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGK--PDSIVS 542
R+LI + G +IG+ G IK++ E++ AR+KI + P ER V + K PD+ +S
Sbjct: 111 RILIPAQKVGAIIGRKGEFIKKMCEESKARIKIL-DGPPGVPERTVMISAKDEPDAPIS 168
>08_01_0673 -
5805218-5805349,5805936-5806026,5806416-5806471,
5806571-5806852,5806924-5807057,5807088-5807163,
5807247-5807747,5808454-5809037,5809579-5809597
Length = 624
Score = 37.5 bits (83), Expect = 0.010
Identities = 25/88 (28%), Positives = 48/88 (54%)
Frame = +3
Query: 252 LSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKI 431
L+++A D + + I + ++P + ++ S EL +R+L + G VIGK G I
Sbjct: 283 LTVSA-DAHSRLPIYQSVLPVIPAYNTPKCSG----ELVLRVLCPAGKIGLVIGKGGVTI 337
Query: 432 KELREKTGARLKIFSNSAPXSSERIVXL 515
K +R+++GAR+ + +S E I+ +
Sbjct: 338 KSIRKESGARIDV-DDSKNDREESIITI 364
Score = 35.9 bits (79), Expect = 0.031
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 399 GCVIGKAGSKIKELREKTGARLKIFSNSAP---XSSERIVXLIGKPDSI 536
GC+IGK GS + ++R KT A + I P SS+ +V + G+ +++
Sbjct: 398 GCLIGKGGSIVNDMRSKTKAAIYISKGEKPRKASSSDELVEVFGEVENL 446
Score = 31.1 bits (67), Expect = 0.88
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +3
Query: 342 SRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 470
+R D E + +L+ S++ VIGK+G+ IK LR + A +K+
Sbjct: 139 TRDSDDE-EANILVPASQSASVIGKSGAVIKRLRSTSKAFIKV 180
>01_01_0956 +
7505206-7505322,7505860-7506723,7506841-7507260,
7508091-7508342,7508696-7508953,7509798-7509877,
7509959-7510070,7510492-7510541,7511070-7511171,
7511215-7511276,7511888-7511928
Length = 785
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +3
Query: 372 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXL 515
R+L S++G VIGK G I ++R++TG ++++ P ER++ +
Sbjct: 91 RILCPTSKSGNVIGKGGGIIAKIRQETGVKIRV-DEVVPGCDERVIVI 137
Score = 35.9 bits (79), Expect = 0.031
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = +3
Query: 372 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFS 476
R+++ ++ GC++GK GS I E+R+ +GA + + S
Sbjct: 501 RLIVSPNQVGCLLGKGGSIIAEMRKLSGAHIIVLS 535
>10_08_0948 +
21754985-21755290,21756042-21756297,21756845-21756999,
21757077-21757349,21757582-21757776,21757867-21758058
Length = 458
Score = 35.5 bits (78), Expect = 0.041
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Frame = +3
Query: 372 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFS---NSAP---XSSERIVXLIGKPDS 533
R+L+ ++A +IGK G+ IK ++E TGA +++ S P ERIV + G+ +
Sbjct: 152 RLLVPGAQAINLIGKQGASIKAIQEGTGATIRVISIDERERPFYVIEDERIVEIQGETEK 211
Query: 534 IVSGVRXV 557
++ ++ V
Sbjct: 212 VLKALQAV 219
>06_02_0257 -
13533689-13533714,13533799-13533925,13534013-13534121,
13534193-13534272,13534758-13534979,13536070-13536318,
13537032-13537484,13539834-13540556
Length = 662
Score = 35.1 bits (77), Expect = 0.054
Identities = 17/73 (23%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = +3
Query: 360 ELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIF--SNSAPXS---SERIVXLIGK 524
++ R+++ + GC++GK G I+++R +T ++I P SE +V ++G+
Sbjct: 186 KVTTRLIVPRLHVGCLLGKGGKIIEQMRAETKTHIRILPRDQHTPRCVSLSEEVVQVVGE 245
Query: 525 PDSIVSGVRXVLD 563
+ + V + D
Sbjct: 246 GNCVKKAVAIISD 258
>12_02_0998 +
25126114-25126596,25129213-25129339,25129349-25129459,
25130122-25130270,25130356-25130643,25130753-25130941,
25131445-25131619,25132219-25132316
Length = 539
Score = 34.7 bits (76), Expect = 0.071
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +3
Query: 372 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPD 530
R+L+ + G VIG+ G IK++ E++ AR+K+ + P +R V + K +
Sbjct: 118 RILVPAQKVGAVIGRKGEFIKKMCEESRARIKVL-DGPPGVPDRAVMISAKDE 169
>06_03_0766 -
24425486-24426245,24430766-24430855,24430951-24431070,
24431568-24431746,24432046-24432231,24432454-24432547,
24432679-24432743,24433652-24433987
Length = 609
Score = 34.7 bits (76), Expect = 0.071
Identities = 22/74 (29%), Positives = 35/74 (47%)
Frame = +3
Query: 372 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVR 551
++ + S AG +IGK G+ K + TGA+L I N + + + I L G D I
Sbjct: 484 KISVDASLAGGIIGKGGTNTKHISRMTGAKLAIRDNESNPNLKNI-ELEGTFDQIKHASA 542
Query: 552 XVLDLVXXVPIXGP 593
V +L+ + P
Sbjct: 543 MVTELIVRISGNAP 556
>10_07_0195 +
13972656-13972970,13973518-13973848,13975312-13975463,
13975573-13976280,13976424-13976615,13977264-13977425
Length = 619
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +3
Query: 372 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGK 524
RMLI ++ G VIG +G +++ L E+T A +++ ++ER V + K
Sbjct: 62 RMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHF-AAAERAVIIFAK 111
>02_01_0703 + 5251901-5251950,5252783-5253554
Length = 273
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/80 (27%), Positives = 38/80 (47%)
Frame = +3
Query: 372 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVR 551
++ + S AG +IG+ G K++ TGA+L I + + + + I L G D I +
Sbjct: 147 KISVDASLAGGIIGRGGVNTKQISRVTGAKLAIRDHESDTNLKNI-ELEGTFDQIKNASA 205
Query: 552 XVLDLVXXVPIXGPIQAYDP 611
V +L+ + P Q P
Sbjct: 206 MVRELIVSIGGGAPPQGKKP 225
>07_03_0173 -
14721369-14721503,14722542-14722629,14723580-14723752,
14727237-14727902
Length = 353
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +3
Query: 405 VIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXVLDLV 569
V G G+ +RE +GA + P +S+ ++ + G PD S + LDLV
Sbjct: 296 VCGDNGNDFTMIREMSGADVTAHY-PLPETSDGMIVISGTPDEAQSALAMFLDLV 349
>07_03_1772 + 29411874-29413218,29413355-29413421,29413749-29413896,
29415293-29415416,29416340-29416590,29416923-29418449,
29418786-29418896,29419576-29419734,29419827-29421734
Length = 1879
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 255 SITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRA 398
+I +DD ++ ++ P L+E N G +LD ++L HQ +A
Sbjct: 1258 NICLDDDILDPSLLANLAPELSELKNSGSVWSAISDLDPKLLPHQRKA 1305
>06_01_1195 +
10280864-10280979,10281024-10281115,10281211-10282156,
10282378-10283075,10283140-10284068
Length = 926
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +3
Query: 276 ETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTG 455
E + ++ DI CLAEF GS+ Q+L L H+ R I S+++E+ ++
Sbjct: 97 EQVRDLSFDIEDCLAEFMVHVGSKSLSQQL--MKLKHRHRIAIQIRDLKSRVEEVSDRNS 154
Query: 456 ARLKIFSNS 482
I N+
Sbjct: 155 RYSLISPNT 163
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,230,345
Number of Sequences: 37544
Number of extensions: 353068
Number of successful extensions: 807
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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