Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2014
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical pr... 115 3e-26
U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical pr... 115 3e-26
AC006714-9|AAK29714.5| 430|Caenorhabditis elegans Patterned exp... 58 5e-09
AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical ... 49 4e-06
U00047-8|AAP68924.1| 510|Caenorhabditis elegans Hypothetical pr... 48 9e-06
U00047-7|AAA50693.2| 557|Caenorhabditis elegans Hypothetical pr... 48 9e-06
Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical p... 45 5e-05
Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr... 36 0.028
AC024089-1|AAK09071.1| 641|Caenorhabditis elegans Hypothetical ... 36 0.037
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 33 0.26
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 33 0.26
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 33 0.26
U88174-6|AAB42272.1| 680|Caenorhabditis elegans Hypothetical pr... 31 0.60
Z68751-4|CAA92974.1| 425|Caenorhabditis elegans Hypothetical pr... 29 2.4
U23177-8|AAM22054.1| 409|Caenorhabditis elegans Hypothetical pr... 28 7.4
U23177-7|AAM22053.1| 867|Caenorhabditis elegans Hypothetical pr... 28 7.4
AC025726-26|AAK73933.2| 129|Caenorhabditis elegans Hypothetical... 28 7.4
Z75542-2|CAA99862.2| 712|Caenorhabditis elegans Hypothetical pr... 27 9.8
AF098986-5|AAC67426.1| 671|Caenorhabditis elegans Hypothetical ... 27 9.8
>U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical
protein F26B1.2c protein.
Length = 380
Score = 115 bits (277), Expect = 3e-26
Identities = 73/202 (36%), Positives = 109/202 (53%), Gaps = 13/202 (6%)
Frame = +3
Query: 57 MKRDAYGDDGPAXKRHRQ--TDD----------EVTFLIPXKVAXXXXXXXXXXXXXXXX 200
MKR+ DDG RH++ TD EV L+ K A
Sbjct: 1 MKREHDNDDGDRTGRHKRPKTDGFTEAIQQGKFEVRLLVSSKSAGAIIGKGGENIKRLRA 60
Query: 201 QYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRML 380
++ A + VPD PERV ++TA D++T++ I+KD++P L + ++ +VRML
Sbjct: 61 EFNAHVQVPDSNTPERVCTVTA-DEKTVLNILKDVLPRLEDNFSER------DPCEVRML 113
Query: 381 IHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXVL 560
+HQS AG +IG+ GSKIKELREK ARLKIF+ AP S++R++ G+ +++ + V+
Sbjct: 114 VHQSHAGALIGRNGSKIKELREKCSARLKIFTGCAPGSTDRVLITSGEQKNVLGIIEEVM 173
Query: 561 DLVXXVPIXGPIQAYDP-HNYD 623
+ +PI G Y P NYD
Sbjct: 174 KELKEIPIKGSATPYLPAFNYD 195
>U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical
protein F26B1.2a protein.
Length = 397
Score = 115 bits (277), Expect = 3e-26
Identities = 73/202 (36%), Positives = 109/202 (53%), Gaps = 13/202 (6%)
Frame = +3
Query: 57 MKRDAYGDDGPAXKRHRQ--TDD----------EVTFLIPXKVAXXXXXXXXXXXXXXXX 200
MKR+ DDG RH++ TD EV L+ K A
Sbjct: 18 MKREHDNDDGDRTGRHKRPKTDGFTEAIQQGKFEVRLLVSSKSAGAIIGKGGENIKRLRA 77
Query: 201 QYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRML 380
++ A + VPD PERV ++TA D++T++ I+KD++P L + ++ +VRML
Sbjct: 78 EFNAHVQVPDSNTPERVCTVTA-DEKTVLNILKDVLPRLEDNFSER------DPCEVRML 130
Query: 381 IHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXVL 560
+HQS AG +IG+ GSKIKELREK ARLKIF+ AP S++R++ G+ +++ + V+
Sbjct: 131 VHQSHAGALIGRNGSKIKELREKCSARLKIFTGCAPGSTDRVLITSGEQKNVLGIIEEVM 190
Query: 561 DLVXXVPIXGPIQAYDP-HNYD 623
+ +PI G Y P NYD
Sbjct: 191 KELKEIPIKGSATPYLPAFNYD 212
>AC006714-9|AAK29714.5| 430|Caenorhabditis elegans Patterned
expression site protein 4 protein.
Length = 430
Score = 58.4 bits (135), Expect = 5e-09
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Frame = +3
Query: 210 ASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQELDVRML 380
A I + D PER+++IT TL I K +F + + + +R++
Sbjct: 103 AKINISDGSCPERIVTITG----TLGVIGKAFNMVCNKFEEDMLLLPNSVPKPPITMRVI 158
Query: 381 IHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
+ ++ G +IGK GSKIK++RE TGA +++ S P S+ER V L G D+I
Sbjct: 159 VPATQCGSLIGKGGSKIKDIREATGASIQVASEMLPHSTERAVTLSGTADAI 210
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/53 (41%), Positives = 34/53 (64%)
Frame = +3
Query: 363 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIG 521
L +R+L+ G +IGK G +IK++RE++GA++ I S P ERIV + G
Sbjct: 72 LTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDGSCP---ERIVTITG 121
>AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical
protein Y59A8B.10 protein.
Length = 413
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +3
Query: 336 GGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA--PXSSERIV 509
GG G L +++LI + G +IGK G ++ L+ R+++ NS P +SERI
Sbjct: 33 GGEEEGGDHLSIKILIPSNAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYPGTSERIC 92
Query: 510 XLIGKPDSIVSGVRXVLDLV 569
+ G+ ++I++ + + D +
Sbjct: 93 LVKGRLNNIMAVIESIQDKI 112
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/127 (25%), Positives = 65/127 (51%), Gaps = 11/127 (8%)
Frame = +3
Query: 234 PGPERVLSITAEDDETLVEIIKDIMPCLAE-FHNQGGSRMGDQE-----LDVRMLIHQSR 395
PG + + ++ +I+ I + E +QGGS D + ++++++ +
Sbjct: 85 PGTSERICLVKGRLNNIMAVIESIQDKIREKCADQGGSDAFDHKNTSRGAEIKIVMPNTS 144
Query: 396 AGCVIGKAGSKIKELREKTGARLKIF----SNSAPXSSERIVXLI-GKPDSIVSGVRXVL 560
AG VIGK+G+ IK++RE+ G +++++ S A S ER+V + + +++ VL
Sbjct: 145 AGMVIGKSGANIKDIREQFGCQIQVYPKAGSVEAKTSLERVVTVAHDEASALLQAASRVL 204
Query: 561 DLVXXVP 581
+ V P
Sbjct: 205 EKVASDP 211
>U00047-8|AAP68924.1| 510|Caenorhabditis elegans Hypothetical
protein ZK418.9b protein.
Length = 510
Score = 47.6 bits (108), Expect = 9e-06
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +3
Query: 333 QGGSRMGDQELDVR--MLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERI 506
Q G G QE + +++ + AG +IGK G IK L +TG +++ ++ P S +RI
Sbjct: 181 QFGGGYGAQEAQAKGEVIVPRLSAGMIIGKGGEMIKRLAAETGTKIQFKPDTNPNSEDRI 240
Query: 507 VXLIGKPDSIVSGVRXVLDLV 569
++G D I + ++V
Sbjct: 241 AVIMGTRDQIYRATERITEIV 261
Score = 36.7 bits (81), Expect = 0.016
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Frame = +3
Query: 330 NQGGSRMGDQ--ELDVRMLIHQSRAGCVIGKAGSKIKELREKTGAR-LKIFSNSAPXSSE 500
NQ G++ G E+ MLI + G VIGK G I+ ++E++G R + + + +
Sbjct: 78 NQTGAQPGAAPGEVTEEMLIPADKIGLVIGKGGETIRIVQEQSGLRNCNVVQETTTATGQ 137
Query: 501 -RIVXLIGKPDSIVSGVRXVLDLVXXVPIXGPIQAYDPH 614
+ + +IG P +I + V +++ P+ PH
Sbjct: 138 PKPLRMIGSPAAIETAKALVHNIMNNTQGNAPLLQRAPH 176
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/75 (22%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 348 MGDQELDVRML-IHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGK 524
MGD + + + + G VIGK GS+I+ +++ +G R+++ + + R + G
Sbjct: 1 MGDSDKITDIYPVPEKVVGLVIGKGGSEIRLIQQTSGCRVQMDPDHQSVNGFRNCTIEGP 60
Query: 525 PDSIVSGVRXVLDLV 569
PD + + + ++
Sbjct: 61 PDQVAVARQMITQVI 75
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 375 MLIHQSRAGCVIGKAGSKIKELREKTGA 458
M + + G VIGK G IK++ +TGA
Sbjct: 289 MHVPAGKCGLVIGKGGENIKQIERETGA 316
>U00047-7|AAA50693.2| 557|Caenorhabditis elegans Hypothetical
protein ZK418.9a protein.
Length = 557
Score = 47.6 bits (108), Expect = 9e-06
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +3
Query: 333 QGGSRMGDQELDVR--MLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERI 506
Q G G QE + +++ + AG +IGK G IK L +TG +++ ++ P S +RI
Sbjct: 228 QFGGGYGAQEAQAKGEVIVPRLSAGMIIGKGGEMIKRLAAETGTKIQFKPDTNPNSEDRI 287
Query: 507 VXLIGKPDSIVSGVRXVLDLV 569
++G D I + ++V
Sbjct: 288 AVIMGTRDQIYRATERITEIV 308
Score = 36.7 bits (81), Expect = 0.016
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Frame = +3
Query: 330 NQGGSRMGDQ--ELDVRMLIHQSRAGCVIGKAGSKIKELREKTGAR-LKIFSNSAPXSSE 500
NQ G++ G E+ MLI + G VIGK G I+ ++E++G R + + + +
Sbjct: 125 NQTGAQPGAAPGEVTEEMLIPADKIGLVIGKGGETIRIVQEQSGLRNCNVVQETTTATGQ 184
Query: 501 -RIVXLIGKPDSIVSGVRXVLDLVXXVPIXGPIQAYDPH 614
+ + +IG P +I + V +++ P+ PH
Sbjct: 185 PKPLRMIGSPAAIETAKALVHNIMNNTQGNAPLLQRAPH 223
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +3
Query: 336 GGSRMGDQELDVRML-IHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVX 512
G MGD + + + + G VIGK GS+I+ +++ +G R+++ + + R
Sbjct: 44 GDLNMGDSDKITDIYPVPEKVVGLVIGKGGSEIRLIQQTSGCRVQMDPDHQSVNGFRNCT 103
Query: 513 LIGKPDSIVSGVRXVLDLV 569
+ G PD + + + ++
Sbjct: 104 IEGPPDQVAVARQMITQVI 122
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 375 MLIHQSRAGCVIGKAGSKIKELREKTGA 458
M + + G VIGK G IK++ +TGA
Sbjct: 336 MHVPAGKCGLVIGKGGENIKQIERETGA 363
>Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical
protein C12D8.1c protein.
Length = 548
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/83 (27%), Positives = 40/83 (48%)
Frame = +3
Query: 321 EFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSE 500
+ H+ GG G +++ +S G +IGK G IK L +TG +++ + P + E
Sbjct: 174 QMHHAGGG--GGASARGEVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQFKPDDDPSTPE 231
Query: 501 RIVXLIGKPDSIVSGVRXVLDLV 569
R ++G D I + +LV
Sbjct: 232 RCAVIMGTRDQIYRATERITELV 254
Score = 40.3 bits (90), Expect = 0.001
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Frame = +3
Query: 225 PDCPGPERVLSITAEDDETLVEIIKDIM-PCLAEFHN---QGGSRMGDQELDVRMLIHQS 392
PD V +T E + VE K ++ +A N Q G +D+ I +
Sbjct: 44 PDADPSSGVRMVTLEGSRSNVETAKHLINEVVARSQNPRPQYGFPRAQTTIDIA--IPPN 101
Query: 393 RAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSE-RIVXLIGKPDSIVSGVRXVLDLV 569
R G +IGK+G I++L+EK+G ++ + ++ S + + + + G P I + V +++
Sbjct: 102 RCGLIIGKSGDTIRQLQEKSGCKMILVQDNQSVSDQSKPLRITGDPQKIELAKQLVAEIL 161
>Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical
protein C12D8.1b protein.
Length = 611
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/83 (27%), Positives = 40/83 (48%)
Frame = +3
Query: 321 EFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSE 500
+ H+ GG G +++ +S G +IGK G IK L +TG +++ + P + E
Sbjct: 237 QMHHAGGG--GGASARGEVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQFKPDDDPSTPE 294
Query: 501 RIVXLIGKPDSIVSGVRXVLDLV 569
R ++G D I + +LV
Sbjct: 295 RCAVIMGTRDQIYRATERITELV 317
Score = 40.3 bits (90), Expect = 0.001
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Frame = +3
Query: 225 PDCPGPERVLSITAEDDETLVEIIKDIM-PCLAEFHN---QGGSRMGDQELDVRMLIHQS 392
PD V +T E + VE K ++ +A N Q G +D+ I +
Sbjct: 107 PDADPSSGVRMVTLEGSRSNVETAKHLINEVVARSQNPRPQYGFPRAQTTIDIA--IPPN 164
Query: 393 RAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSE-RIVXLIGKPDSIVSGVRXVLDLV 569
R G +IGK+G I++L+EK+G ++ + ++ S + + + + G P I + V +++
Sbjct: 165 RCGLIIGKSGDTIRQLQEKSGCKMILVQDNQSVSDQSKPLRITGDPQKIELAKQLVAEIL 224
>Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical
protein C12D8.1a protein.
Length = 589
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/83 (27%), Positives = 40/83 (48%)
Frame = +3
Query: 321 EFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSE 500
+ H+ GG G +++ +S G +IGK G IK L +TG +++ + P + E
Sbjct: 215 QMHHAGGG--GGASARGEVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQFKPDDDPSTPE 272
Query: 501 RIVXLIGKPDSIVSGVRXVLDLV 569
R ++G D I + +LV
Sbjct: 273 RCAVIMGTRDQIYRATERITELV 295
Score = 40.3 bits (90), Expect = 0.001
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Frame = +3
Query: 225 PDCPGPERVLSITAEDDETLVEIIKDIM-PCLAEFHN---QGGSRMGDQELDVRMLIHQS 392
PD V +T E + VE K ++ +A N Q G +D+ I +
Sbjct: 85 PDADPSSGVRMVTLEGSRSNVETAKHLINEVVARSQNPRPQYGFPRAQTTIDIA--IPPN 142
Query: 393 RAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSE-RIVXLIGKPDSIVSGVRXVLDLV 569
R G +IGK+G I++L+EK+G ++ + ++ S + + + + G P I + V +++
Sbjct: 143 RCGLIIGKSGDTIRQLQEKSGCKMILVQDNQSVSDQSKPLRITGDPQKIELAKQLVAEIL 202
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 470
+RM H G +IGKAGS IKE+ +KTG + +
Sbjct: 277 LRMRAHNQLCGRLIGKAGSSIKEIMQKTGTNITV 310
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 470
VRM + S G +IG G IK + TGA +KI
Sbjct: 419 VRMWVPDSMIGALIGAKGKNIKMIIRDTGASVKI 452
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Frame = +3
Query: 234 PGPERVLSITAEDDETLVE---IIKDIMPCLAEFHNQG--GSRMGDQELDVRMLIHQSRA 398
P ER+++I +D + L + I + + G G R + + +
Sbjct: 510 PVSERMVTINGDDLQLLKAQSYVFSKIAETSSSLPSSGMDGDRSHMLRIRTEVSVPTRII 569
Query: 399 GCVIGKAGSKIKELREKTGARLKI 470
G +IGK G ++EL+ TGA +KI
Sbjct: 570 GRIIGKGGQNVRELQRITGAVVKI 593
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 470
+RM H G +IGKAGS IKE+ +KTG + +
Sbjct: 401 LRMRAHNQLCGRLIGKAGSSIKEIMQKTGTNITV 434
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 470
VRM + S G +IG G IK + TGA +KI
Sbjct: 543 VRMWVPDSMIGALIGAKGKNIKMIIRDTGASVKI 576
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Frame = +3
Query: 234 PGPERVLSITAEDDETLVE---IIKDIMPCLAEFHNQG--GSRMGDQELDVRMLIHQSRA 398
P ER+++I +D + L + I + + G G R + + +
Sbjct: 634 PVSERMVTINGDDLQLLKAQSYVFSKIAETSSSLPSSGMDGDRSHMLRIRTEVSVPTRII 693
Query: 399 GCVIGKAGSKIKELREKTGARLKI 470
G +IGK G ++EL+ TGA +KI
Sbjct: 694 GRIIGKGGQNVRELQRITGAVVKI 717
>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical
protein C08H9.2 protein.
Length = 1220
Score = 35.9 bits (79), Expect = 0.028
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = +3
Query: 405 VIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXVLDLVXXVPI 584
+IGK GSKI +LR+ R+ +F E I L+GK + + + D + +
Sbjct: 725 LIGKGGSKIAKLRDTLNVRV-MFPKEGDAEKETI-HLLGKKEDVPKAKAALEDAIKQLSE 782
Query: 585 XGPIQ-AYDPHNYDDFLCGKXMXASEMGQGNG 677
I+ DP Y +FL E+ + NG
Sbjct: 783 TVDIKITVDPKYYKNFLARGAALVKEIQEQNG 814
>AC024089-1|AAK09071.1| 641|Caenorhabditis elegans Hypothetical
protein C36E6.1b protein.
Length = 641
Score = 35.5 bits (78), Expect = 0.037
Identities = 13/58 (22%), Positives = 32/58 (55%)
Frame = +3
Query: 363 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSI 536
+ +++ + + G ++G G IK+L ++TG +++ + P ER + +IG + +
Sbjct: 246 MSLQVKVPRCTVGAIMGLQGKNIKKLSDETGTKIQFLPDDDPKLMERSLAIIGNKNKV 303
Score = 31.5 bits (68), Expect = 0.60
Identities = 15/74 (20%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +3
Query: 351 GD-QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKP 527
GD ++ + + I ++ G +IGK G ++++LR T +++ ++ + + + + G P
Sbjct: 152 GDPSKITIEIPIPANKCGAIIGKGGEQMRKLRSWTNCNVQLLQDNNIADTVKPLKITGDP 211
Query: 528 DSIVSGVRXVLDLV 569
+ V D++
Sbjct: 212 KQVEQCRLLVADIL 225
Score = 31.1 bits (67), Expect = 0.79
Identities = 15/67 (22%), Positives = 38/67 (56%)
Frame = +3
Query: 369 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGV 548
V + + + G VIG+ G++++ + +K+G R+++ + + R+V + G P++I
Sbjct: 57 VAVPVPEQCVGLVIGRNGAEVQAISQKSGCRVQV-TVQPSSTGFRLVEIYGIPENIERAK 115
Query: 549 RXVLDLV 569
+ ++V
Sbjct: 116 AYISEVV 122
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 372 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFS-NSAPXSSERIVXLIGKPDSI 536
++ I A VIGK GS + +RE TGA ++I + +ER V G P+ +
Sbjct: 1797 KLTIPAYAASRVIGKGGSNVNAVREATGAIIEINKIQESNKQAERTVLAKGTPEMV 1852
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 372 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFS-NSAPXSSERIVXLIGKPDSI 536
++ I A VIGK GS + +RE TGA ++I + +ER V G P+ +
Sbjct: 1797 KLTIPAYAASRVIGKGGSNVNAVREATGAIIEINKIQESNKQAERTVLAKGTPEMV 1852
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 372 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFS-NSAPXSSERIVXLIGKPDSI 536
++ I A VIGK GS + +RE TGA ++I + +ER V G P+ +
Sbjct: 618 KLTIPAYAASRVIGKGGSNVNAVREATGAIIEINKIQESNKQAERTVLAKGTPEMV 673
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 372 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFS-NSAPXSSERIVXLIGKPDSI 536
++ I A VIGK GS + +RE TGA ++I + +ER V G P+ +
Sbjct: 618 KLTIPAYAASRVIGKGGSNVNAVREATGAIIEINKIQESNKQAERTVLAKGTPEMV 673
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 372 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFS-NSAPXSSERIVXLIGKPDSI 536
++ I A VIGK GS + +RE TGA ++I + +ER V G P+ +
Sbjct: 1797 KLTIPAYAASRVIGKGGSNVNAVREATGAIIEINKIQESNKQAERTVLAKGTPEMV 1852
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 372 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFS-NSAPXSSERIVXLIGKPDSI 536
++ I A VIGK GS + +RE TGA ++I + +ER V G P+ +
Sbjct: 1797 KLTIPAYAASRVIGKGGSNVNAVREATGAIIEINKIQESNKQAERTVLAKGTPEMV 1852
>U88174-6|AAB42272.1| 680|Caenorhabditis elegans Hypothetical
protein M01A10.1 protein.
Length = 680
Score = 31.5 bits (68), Expect = 0.60
Identities = 17/73 (23%), Positives = 35/73 (47%)
Frame = +3
Query: 375 MLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRX 554
MLI S+ G VIG+ G I+++ +++GA ++ + + + E+ + G +
Sbjct: 415 MLIPASKCGLVIGRGGETIRQINKESGAYCEMSRDPSISAIEKQFVIRGSETQVEHAKHL 474
Query: 555 VLDLVXXVPIXGP 593
+ V +P P
Sbjct: 475 IRVKVGDIPPNTP 487
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/94 (17%), Positives = 42/94 (44%)
Frame = +3
Query: 288 EIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLK 467
++ ++ +PC + ++ + + I ++ G +IGK G ++++LR T
Sbjct: 218 KLSQEPLPCSVPQFQPIPAVSNSSKVTIIIPIPANKCGAIIGKKGEQMRKLRSWTNCDFI 277
Query: 468 IFSNSAPXSSERIVXLIGKPDSIVSGVRXVLDLV 569
+ + S + + + G+P + V D++
Sbjct: 278 LIQENNIADSVKPLQITGQPKEVEHAKALVADIL 311
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/63 (25%), Positives = 35/63 (55%)
Frame = +3
Query: 381 IHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPXSSERIVXLIGKPDSIVSGVRXVL 560
I + G VIG+ G +I+ + +K+G R++I + + + R V + G ++I + +
Sbjct: 152 IPEESVGLVIGRNGVEIQAISQKSGCRVQIVAEPS-TTGYRSVDIYGISENIEVAKKLIN 210
Query: 561 DLV 569
++V
Sbjct: 211 EVV 213
>Z68751-4|CAA92974.1| 425|Caenorhabditis elegans Hypothetical
protein T05E11.4 protein.
Length = 425
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/55 (32%), Positives = 22/55 (40%)
Frame = +3
Query: 519 GKPDSIVSGVRXVLDLVXXVPIXGPIQAYDPHNYDDFLCGKXMXASEMGQGNGPF 683
G PD V +L PI G A DPH + +L K E +G G F
Sbjct: 229 GYPDIATRNVLKMLSEKRKFPIYGLFDA-DPHGIEIYLTYKYGPTKEFAEGRGAF 282
>U23177-8|AAM22054.1| 409|Caenorhabditis elegans Hypothetical
protein C56G2.1b protein.
Length = 409
Score = 27.9 bits (59), Expect = 7.4
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = +3
Query: 315 LAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI--FSNSAP 488
LA H G + D I S G +IG G IKEL +T R+ I +
Sbjct: 55 LASPHEDGLTTEDDFLPMYEFEIPNSLVGLIIGVKGKTIKELSVRTNVRMLIRQHHETDK 114
Query: 489 XSSERIVXLIGKPDSI 536
+ +I + GK D I
Sbjct: 115 VKTHQICQVRGKRDEI 130
>U23177-7|AAM22053.1| 867|Caenorhabditis elegans Hypothetical
protein C56G2.1a protein.
Length = 867
Score = 27.9 bits (59), Expect = 7.4
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = +3
Query: 315 LAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI--FSNSAP 488
LA H G + D I S G +IG G IKEL +T R+ I +
Sbjct: 513 LASPHEDGLTTEDDFLPMYEFEIPNSLVGLIIGVKGKTIKELSVRTNVRMLIRQHHETDK 572
Query: 489 XSSERIVXLIGKPDSI 536
+ +I + GK D I
Sbjct: 573 VKTHQICQVRGKRDEI 588
>AC025726-26|AAK73933.2| 129|Caenorhabditis elegans Hypothetical
protein Y71G12B.7 protein.
Length = 129
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3
Query: 296 NDFHERFVIFSCYGEYPFGAGAIW 225
N H R IF C+GE+ F IW
Sbjct: 94 NCIHSRLSIFFCFGEFMFILKLIW 117
>Z75542-2|CAA99862.2| 712|Caenorhabditis elegans Hypothetical
protein F55D12.2 protein.
Length = 712
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 283 SWKSLKISCRAWQNFITRVD 342
SW S +I + WQN++ VD
Sbjct: 151 SWLSKRIEIKKWQNYLVEVD 170
>AF098986-5|AAC67426.1| 671|Caenorhabditis elegans Hypothetical
protein C36C9.4 protein.
Length = 671
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 505 MRSELWGAEFENIFSRAPVFSRNSLIFEPAF 413
+R EL +EF+ I R+P FS N + + AF
Sbjct: 361 IRKELLLSEFKKIKPRSPPFSNNKGVLKEAF 391
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,625,093
Number of Sequences: 27780
Number of extensions: 277929
Number of successful extensions: 643
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -