Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2013
(530 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41094 Cluster: 40S ribosomal protein S18; n=137; Eukar... 210 2e-53
UniRef50_P62269 Cluster: 40S ribosomal protein S18; n=58; Eukary... 194 1e-48
UniRef50_UPI00006CC3CE Cluster: ribosomal protein S13p/S18e cont... 132 6e-30
UniRef50_UPI00001C91B1 Cluster: PREDICTED: similar to ribosomal ... 132 6e-30
UniRef50_Q7QRY7 Cluster: GLP_549_8004_7540; n=1; Giardia lamblia... 113 3e-24
UniRef50_A2E0E1 Cluster: Ribosomal protein S13p/S18e, putative; ... 101 1e-20
UniRef50_P54019 Cluster: 30S ribosomal protein S13P; n=9; Euryar... 97 2e-19
UniRef50_Q9HJD6 Cluster: 30S ribosomal protein S13P; n=4; Thermo... 93 4e-18
UniRef50_Q4V607 Cluster: IP07925p; n=3; Sophophora|Rep: IP07925p... 93 5e-18
UniRef50_Q8TRR2 Cluster: 30S ribosomal protein S13P; n=4; Euryar... 91 1e-17
UniRef50_Q8SRP2 Cluster: 40S ribosomal protein S18; n=1; Encepha... 89 6e-17
UniRef50_Q96YV7 Cluster: 30S ribosomal protein S13P; n=10; Archa... 89 8e-17
UniRef50_Q0W1V6 Cluster: 30S ribosomal protein S13P; n=11; Archa... 86 4e-16
UniRef50_Q8H583 Cluster: Ribosomal protein S18-like; n=1; Oryza ... 85 1e-15
UniRef50_Q6LXN1 Cluster: 30S ribosomal protein S13P; n=4; Methan... 83 3e-15
UniRef50_Q00861 Cluster: 30S ribosomal protein S13P; n=5; Haloba... 80 4e-14
UniRef50_A0EBZ1 Cluster: Chromosome undetermined scaffold_89, wh... 79 6e-14
UniRef50_Q3LW54 Cluster: Ribosomal protein S18; n=1; Bigelowiell... 78 1e-13
UniRef50_A0RY01 Cluster: 30S ribosomal protein S13P; n=2; Thermo... 77 3e-13
UniRef50_A0SNY5 Cluster: SSU ribosomal protein S13AB; n=1; uncul... 71 2e-11
UniRef50_Q74M95 Cluster: 30S ribosomal protein S13P; n=1; Nanoar... 70 4e-11
UniRef50_A4WM28 Cluster: 30S ribosomal protein S13P; n=2; Thermo... 69 7e-11
UniRef50_Q00VP7 Cluster: Chromosome 14 contig 1, DNA sequence; n... 59 5e-08
UniRef50_UPI0001555DA0 Cluster: PREDICTED: similar to olfactory ... 58 1e-07
UniRef50_Q9X1I5 Cluster: 30S ribosomal protein S13; n=14; Bacter... 52 1e-05
UniRef50_Q7QRY8 Cluster: GLP_549_7513_8304; n=1; Giardia lamblia... 41 0.021
UniRef50_O66486 Cluster: 30S ribosomal protein S13; n=28; cellul... 40 0.027
UniRef50_Q601J1 Cluster: 30S ribosomal protein S13; n=3; Mycopla... 38 0.14
UniRef50_A0CSW0 Cluster: Chromosome undetermined scaffold_26, wh... 36 0.58
UniRef50_A6RYD3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.58
UniRef50_P46747 Cluster: Mitochondrial ribosomal protein S13; n=... 36 0.77
UniRef50_A6PT06 Cluster: Ribosomal protein S13; n=1; Victivallis... 35 1.0
UniRef50_Q4WP11 Cluster: 40S ribosomal protein S13; n=5; Eurotio... 35 1.3
UniRef50_Q4PDK9 Cluster: Putative uncharacterized protein; n=2; ... 35 1.3
UniRef50_A1CXK9 Cluster: 40S ribosomal protein S13; n=7; Pezizom... 35 1.3
UniRef50_Q0QIP8 Cluster: Ribosomal protein S13; n=1; Oltmannsiel... 34 1.8
UniRef50_Q5B4R2 Cluster: Putative uncharacterized protein; n=1; ... 34 1.8
UniRef50_O59772 Cluster: Mitochondrial ribosomal protein subunit... 34 2.4
UniRef50_Q8FS35 Cluster: 30S ribosomal protein S13; n=42; Bacter... 34 2.4
UniRef50_Q9TCB7 Cluster: Ribosomal protein S13; n=1; Nephroselmi... 33 3.1
UniRef50_Q5NQ42 Cluster: 30S ribosomal protein S13; n=107; cellu... 33 3.1
UniRef50_A7PUB9 Cluster: Chromosome chr7 scaffold_31, whole geno... 33 4.1
UniRef50_O21258 Cluster: Ribosomal protein S13; n=1; Reclinomona... 33 4.1
UniRef50_Q6CFI9 Cluster: Yarrowia lipolytica chromosome B of str... 33 4.1
UniRef50_A6LXE0 Cluster: Putative uncharacterized protein precur... 33 5.4
UniRef50_Q8W9S0 Cluster: Ribosomal protein S13; n=1; Mesostigma ... 33 5.4
UniRef50_Q026Q4 Cluster: Trigger factor; n=1; Solibacter usitatu... 32 7.2
UniRef50_A6Q707 Cluster: Periplasmic nitrate reductase component... 32 7.2
UniRef50_A4ELR9 Cluster: Phospholipase D, putative; n=1; Roseoba... 32 7.2
UniRef50_A0DZU7 Cluster: Chromosome undetermined scaffold_70, wh... 32 7.2
UniRef50_P42732 Cluster: 30S ribosomal protein S13, chloroplast ... 32 7.2
UniRef50_Q6YPQ1 Cluster: DNA glycosylase; n=4; Candidatus Phytop... 32 9.5
UniRef50_A3IUX9 Cluster: Putative uncharacterized protein; n=1; ... 32 9.5
UniRef50_Q7PZ56 Cluster: ENSANGP00000008877; n=2; Culicidae|Rep:... 32 9.5
UniRef50_P15758 Cluster: Mitochondrial ribosomal protein S13; n=... 32 9.5
>UniRef50_P41094 Cluster: 40S ribosomal protein S18; n=137;
Eukaryota|Rep: 40S ribosomal protein S18 - Drosophila
melanogaster (Fruit fly)
Length = 152
Score = 210 bits (512), Expect = 2e-53
Identities = 93/107 (86%), Positives = 104/107 (97%)
Frame = +2
Query: 104 AMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFLNRQK 283
AMTAIKGVGRRYSNIVLKKAD+DL KRAGECTEEEV+K++TI+SNP QYK+P+WFLNRQK
Sbjct: 29 AMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVPNWFLNRQK 88
Query: 284 DIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 424
DI+DGKY QLTSSNLDSKLR+DLERLKKIR+HRG+RHYWGLRVRGQH
Sbjct: 89 DIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRVRGQH 135
Score = 55.6 bits (128), Expect = 7e-07
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 19 MSLVIPDKFQHILRIMNTNIDGKRKV 96
MSLVIP+KFQHILRIMNTNIDGKRKV
Sbjct: 1 MSLVIPEKFQHILRIMNTNIDGKRKV 26
>UniRef50_P62269 Cluster: 40S ribosomal protein S18; n=58;
Eukaryota|Rep: 40S ribosomal protein S18 - Homo sapiens
(Human)
Length = 152
Score = 194 bits (472), Expect = 1e-48
Identities = 85/111 (76%), Positives = 102/111 (91%)
Frame = +2
Query: 92 RLCSAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFL 271
++ A+TAIKGVGRRY+++VL+KADIDL KRAGE TE+EVE++ITIM NP QYKIPDWFL
Sbjct: 25 KIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFL 84
Query: 272 NRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 424
NRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+WGLRVRGQH
Sbjct: 85 NRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQH 135
Score = 54.4 bits (125), Expect = 2e-06
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +1
Query: 19 MSLVIPDKFQHILRIMNTNIDGKRKVMF 102
MSLVIP+KFQHILR++NTNIDG+RK+ F
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAF 28
>UniRef50_UPI00006CC3CE Cluster: ribosomal protein S13p/S18e
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: ribosomal protein S13p/S18e containing
protein - Tetrahymena thermophila SB210
Length = 155
Score = 132 bits (318), Expect = 6e-30
Identities = 57/107 (53%), Positives = 80/107 (74%)
Frame = +2
Query: 104 AMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFLNRQK 283
A+T I+G+GRR++ I+ K ID + RAG TE++ KI ++++P + IP W LNR
Sbjct: 31 ALTGIRGIGRRFAYIICKVLKIDPNARAGLLTEDQCNKITDLIADPEAHGIPTWLLNRIN 90
Query: 284 DIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 424
D DGK Q+ S+ LD+K+REDLERLKKI++HRG+RH+WGL+VRGQH
Sbjct: 91 DFKDGKNYQMASNTLDTKMREDLERLKKIKSHRGLRHFWGLKVRGQH 137
>UniRef50_UPI00001C91B1 Cluster: PREDICTED: similar to ribosomal
protein S18; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S18 - Rattus norvegicus
Length = 170
Score = 132 bits (318), Expect = 6e-30
Identities = 63/106 (59%), Positives = 83/106 (78%)
Frame = +2
Query: 104 AMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFLNRQK 283
A+TA KG +RY+++VL+KA IDL K AGE TE++VE++ITIM NP QY+IP QK
Sbjct: 29 AITATKGAEQRYAHVVLRKAGIDLTKMAGELTEDKVERVITIMQNPRQYEIP------QK 82
Query: 284 DIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
+ DG+ SQ+ ++ LD+KLRE+LERLKKIRAHRG+RH+WGL V Q
Sbjct: 83 GVRDGRCSQVPANGLDNKLREELERLKKIRAHRGLRHFWGLHVHCQ 128
Score = 38.3 bits (85), Expect = 0.11
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = +1
Query: 19 MSLVIPDKFQHILRIMNTNIDGKRKVMF 102
MSLVI +K QHIL+++NTNID +++ F
Sbjct: 1 MSLVISEKSQHILQVLNTNIDEQQETAF 28
>UniRef50_Q7QRY7 Cluster: GLP_549_8004_7540; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_549_8004_7540 - Giardia lamblia ATCC
50803
Length = 154
Score = 113 bits (271), Expect = 3e-24
Identities = 50/107 (46%), Positives = 71/107 (66%)
Frame = +2
Query: 104 AMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFLNRQK 283
A+ IKG+GRR++N+ LKKA+ID+ KRAGE T E + ++ ++ +P + IP W LNR
Sbjct: 30 ALVGIKGIGRRFANVALKKANIDVHKRAGELTAAEEDALMKVLEDPLSHGIPAWMLNRNN 89
Query: 284 DIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 424
D GK + + + S R DLERL+K R RG+RH+ L+VRGQH
Sbjct: 90 DFESGKDMHILVNTIASTHRADLERLRKTRCERGVRHHHNLKVRGQH 136
>UniRef50_A2E0E1 Cluster: Ribosomal protein S13p/S18e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S13p/S18e, putative - Trichomonas vaginalis G3
Length = 155
Score = 101 bits (242), Expect = 1e-20
Identities = 45/106 (42%), Positives = 75/106 (70%)
Frame = +2
Query: 104 AMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFLNRQK 283
A+T I G+GRR++ V+++A +D +RAG T +E E I++I+ NP +++IP W LNR+
Sbjct: 31 ALTNISGIGRRFAYAVVRRAGLDPLRRAGTLTPKEEELIVSIIQNPTEHQIPVWMLNRRF 90
Query: 284 DIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
D G+ + +++L + +R ++ER+KK+R RG+RH GL+VRGQ
Sbjct: 91 DRATGQNTHWVATDLSANIRAEIERMKKMRMKRGIRHGLGLKVRGQ 136
>UniRef50_P54019 Cluster: 30S ribosomal protein S13P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S13P -
Methanococcus jannaschii
Length = 150
Score = 97.5 bits (232), Expect = 2e-19
Identities = 49/118 (41%), Positives = 74/118 (62%), Gaps = 1/118 (0%)
Frame = +2
Query: 71 RTSM-ANARLCSAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQ 247
RT + N +L A+ I GVG + +++ A +D +K AG TEEEV+KI ++++P +
Sbjct: 14 RTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPNKLAGYLTEEEVKKIEEVLADPAK 73
Query: 248 YKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
+ IP W NR+KD V G+ + S+L +ED+ RLK+IR +RG+RH GL RGQ
Sbjct: 74 FGIPSWMFNRRKDYVTGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHELGLPCRGQ 131
>UniRef50_Q9HJD6 Cluster: 30S ribosomal protein S13P; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S13P -
Thermoplasma acidophilum
Length = 171
Score = 93.1 bits (221), Expect = 4e-18
Identities = 39/106 (36%), Positives = 73/106 (68%)
Frame = +2
Query: 104 AMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFLNRQK 283
A++ +KG+G R ++ ++ D+ +DK+ GE EE++EK+ + +Y +P+W LN ++
Sbjct: 48 ALSDLKGIGERLGYVIAERLDLPIDKKIGELKEEQLEKLREYVE-AKEYDLPEWLLNHRR 106
Query: 284 DIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
+ V GK L S++L+ +++ED+ +KKIR+++G+RH G +VRGQ
Sbjct: 107 EPVTGKNLNLVSTDLEIQVQEDINLMKKIRSYKGIRHEKGKKVRGQ 152
>UniRef50_Q4V607 Cluster: IP07925p; n=3; Sophophora|Rep: IP07925p -
Drosophila melanogaster (Fruit fly)
Length = 246
Score = 92.7 bits (220), Expect = 5e-18
Identities = 40/48 (83%), Positives = 46/48 (95%)
Frame = +2
Query: 116 IKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIP 259
IKGVGRRYSNIVLKKAD+DL KRAGECTEEEV+K++TI+SNP QYK+P
Sbjct: 1 IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP 48
>UniRef50_Q8TRR2 Cluster: 30S ribosomal protein S13P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S13P -
Methanosarcina acetivorans
Length = 162
Score = 91.5 bits (217), Expect = 1e-17
Identities = 45/106 (42%), Positives = 65/106 (61%)
Frame = +2
Query: 104 AMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFLNRQK 283
A+T + GVGRR + ++ K A +D G EEEV K+ T + + +P W LNRQK
Sbjct: 40 ALTGLPGVGRRTAKLIAKGAGVDPSAILGYLPEEEVAKLDTAIGK-FEDIVPSWMLNRQK 98
Query: 284 DIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
D+ G+ L +++ RED+ LKK+RA+RG+RH GL+VRGQ
Sbjct: 99 DLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVRGQ 144
>UniRef50_Q8SRP2 Cluster: 40S ribosomal protein S18; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S18
- Encephalitozoon cuniculi
Length = 153
Score = 89.0 bits (211), Expect = 6e-17
Identities = 46/110 (41%), Positives = 69/110 (62%)
Frame = +2
Query: 92 RLCSAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFL 271
R+ A+T I+G+G R + + K+ IDL KRAGE E+E+++I + +P IP+ ++
Sbjct: 26 RIPFALTKIRGIGIRIATAICKRLGIDLRKRAGEMGEDEMKRISDAILDPASVGIPESYM 85
Query: 272 NRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
N Q+DI+DG S L + LD+ LR +ER KK + R R GL+VRGQ
Sbjct: 86 NHQRDIIDGTTSHLIGTRLDADLRMMIERGKKNKRIRAYRLDVGLKVRGQ 135
>UniRef50_Q96YV7 Cluster: 30S ribosomal protein S13P; n=10;
Archaea|Rep: 30S ribosomal protein S13P - Sulfolobus
tokodaii
Length = 172
Score = 88.6 bits (210), Expect = 8e-17
Identities = 40/106 (37%), Positives = 68/106 (64%)
Frame = +2
Query: 104 AMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFLNRQK 283
A+ +KG+G + ++ K +D D+R GE ++E+++KI +++ ++P+W NR+K
Sbjct: 27 ALAMVKGIGYNTARAIVFKLGLDKDRRLGELSDEDIKKIENYLTDKKILEVPNWMYNRRK 86
Query: 284 DIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
D G L +S+L +R D+ER KKI++ RG+RH GL+VRGQ
Sbjct: 87 DYESGIDMHLVTSDLIFYVRNDIEREKKIKSWRGVRHSLGLKVRGQ 132
>UniRef50_Q0W1V6 Cluster: 30S ribosomal protein S13P; n=11;
Archaea|Rep: 30S ribosomal protein S13P - Uncultured
methanogenic archaeon RC-I
Length = 224
Score = 86.2 bits (204), Expect = 4e-16
Identities = 40/106 (37%), Positives = 66/106 (62%)
Frame = +2
Query: 104 AMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFLNRQK 283
A+T IKG+G R S I+ ++A +D G E+V+K+ ++ N + +P W LNR++
Sbjct: 89 ALTGIKGIGNRISKIIARQAQVDPHATMGYLPPEQVDKLRAVIDN-LEANVPVWMLNRRR 147
Query: 284 DIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
DI G+ L +L ++ED+ +KKIR+++G+RH G +VRGQ
Sbjct: 148 DIYTGEDKHLYGVDLTMAVKEDINIMKKIRSYKGIRHERGQKVRGQ 193
>UniRef50_Q8H583 Cluster: Ribosomal protein S18-like; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Ribosomal protein
S18-like - Oryza sativa subsp. japonica (Rice)
Length = 145
Score = 85.0 bits (201), Expect = 1e-15
Identities = 36/50 (72%), Positives = 44/50 (88%)
Frame = +2
Query: 275 RQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 424
++KD DG++SQ+ S+ LD KLR+DLERLKKIR HRG+RHYWGLRVRGQH
Sbjct: 79 QKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQH 128
>UniRef50_Q6LXN1 Cluster: 30S ribosomal protein S13P; n=4;
Methanococcus|Rep: 30S ribosomal protein S13P -
Methanococcus maripaludis
Length = 149
Score = 83.4 bits (197), Expect = 3e-15
Identities = 37/106 (34%), Positives = 65/106 (61%)
Frame = +2
Query: 104 AMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFLNRQK 283
A+ +KG+GR + V++ ++D ++AG +E+V KI +++ +P + IP W NR+K
Sbjct: 26 ALQDMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKIESVLEDPATHGIPSWMFNRKK 85
Query: 284 DIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
D+ G L ++L ++ED+ +KKIR ++G+RH L RGQ
Sbjct: 86 DVYSGLDKHLIETDLVLTVQEDITNMKKIRCYKGIRHELRLPCRGQ 131
>UniRef50_Q00861 Cluster: 30S ribosomal protein S13P; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S13P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 79.8 bits (188), Expect = 4e-14
Identities = 36/106 (33%), Positives = 64/106 (60%)
Frame = +2
Query: 104 AMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFLNRQK 283
A+T + G+G R + I+ +KAD+D G+ ++ +E+++ + N +P+W N QK
Sbjct: 40 ALTELNGIGHRAARIIAQKADVDRRAVFGKLDDDVIERVVERVENFAD-DVPEWMTNHQK 98
Query: 284 DIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
D G+ + T ++L R+D+ R+K I ++RG+RH G +VRGQ
Sbjct: 99 DYFTGETTHETGNDLQLTRRQDINRMKMIDSYRGVRHKRGQKVRGQ 144
>UniRef50_A0EBZ1 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_89,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 193
Score = 79.0 bits (186), Expect = 6e-14
Identities = 42/101 (41%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
Frame = +2
Query: 113 AIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFLNRQKDIV 292
+IKG+GRR++ + K ++L KRAGE T+EE KI ++ QY +D+
Sbjct: 34 SIKGIGRRFAIQICKVLRLNLTKRAGELTDEEAHKITEVIKMVPQY---------IRDLK 84
Query: 293 DGKYSQLTSSNLDSKLREDLERLKKIRAHRG--MRHYWGLR 409
+GK ++T++ L++KLREDLER+KKI+ + +RH+WGLR
Sbjct: 85 NGKNYEVTTNELETKLREDLERIKKIKYSQWLCLRHHWGLR 125
Score = 35.5 bits (78), Expect = 0.77
Identities = 15/30 (50%), Positives = 25/30 (83%), Gaps = 2/30 (6%)
Frame = +1
Query: 19 MSLVIP--DKFQHILRIMNTNIDGKRKVMF 102
MSLV+ D+F+ I+RI+NTN+DGK+++ +
Sbjct: 1 MSLVLEKADQFRQIIRILNTNVDGKQQMAY 30
>UniRef50_Q3LW54 Cluster: Ribosomal protein S18; n=1; Bigelowiella
natans|Rep: Ribosomal protein S18 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 159
Score = 78.2 bits (184), Expect = 1e-13
Identities = 39/138 (28%), Positives = 76/138 (55%), Gaps = 1/138 (0%)
Frame = +2
Query: 14 PKCRWSFQTNFNIFFVS*IRTSMANARLCS-AMTAIKGVGRRYSNIVLKKADIDLDKRAG 190
P + +++ ++ F+ ++ + C+ + IKGVG R SN++ K D++ +
Sbjct: 4 PNNKLNYKDEKSMTFIRIFDCNINGSLSCNFGLRNIKGVGIRMSNVLRKILKKDINYKLY 63
Query: 191 ECTEEEVEKIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKI 370
+ ++E+++ I + P W +NR+ D + G + S+ LDS L+ED++RL I
Sbjct: 64 NIEKADLEEVVNIFGKSSRKAFPSWLMNRRADFLTGDNLHVLSTVLDSALQEDIKRLVTI 123
Query: 371 RAHRGMRHYWGLRVRGQH 424
+ ++G+RH L+ RGQH
Sbjct: 124 KNNKGLRHLSRLKTRGQH 141
>UniRef50_A0RY01 Cluster: 30S ribosomal protein S13P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S13P -
Cenarchaeum symbiosum
Length = 227
Score = 76.6 bits (180), Expect = 3e-13
Identities = 35/102 (34%), Positives = 61/102 (59%)
Frame = +2
Query: 116 IKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFLNRQKDIVD 295
I+G+G ++ +L ID + G T+E+V I ++ +P P WFLNR+KD+
Sbjct: 75 IRGIGYGFATAILDVLKIDNNSNIGYLTDEQVASIEKLLQDPAGAGFPTWFLNRRKDLET 134
Query: 296 GKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
G+ + +S+++ +R D+ER + + +G RH +GL+VRGQ
Sbjct: 135 GEDRHIFTSDIEFTVRNDVERERVSGSWKGYRHMFGLKVRGQ 176
>UniRef50_A0SNY5 Cluster: SSU ribosomal protein S13AB; n=1;
uncultured euryarchaeote ARMAN-2|Rep: SSU ribosomal
protein S13AB - uncultured euryarchaeote ARMAN-2
Length = 177
Score = 70.5 bits (165), Expect = 2e-11
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Frame = +2
Query: 104 AMTAIKGVGRRYSN----IVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFL 271
A+ +KG+G+ S+ ++ K +ID G E +V ++ ++ +P +Y +P + L
Sbjct: 36 ALDQVKGIGQTMSHSLSYVIEHKFNIDPSTPIGSLNESQVTQVEELIKDPHKYGVPKYLL 95
Query: 272 NRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 424
NR+ D+ GK L ++L +R+ + R +R RG RH +G +VRGQH
Sbjct: 96 NRRNDMDTGKDMHLIGNDLIFAVRQSINRDVTLRVWRGYRHQYGQKVRGQH 146
>UniRef50_Q74M95 Cluster: 30S ribosomal protein S13P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S13P -
Nanoarchaeum equitans
Length = 153
Score = 69.7 bits (163), Expect = 4e-11
Identities = 35/102 (34%), Positives = 56/102 (54%)
Frame = +2
Query: 116 IKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFLNRQKDIVD 295
+ GV +++ V ID ++ G ++EE+EK+ + NP +Y IP W NR++D
Sbjct: 34 VVGVNWMFAHAVCAALGIDKWRKIGSLSDEELEKLEDALRNPWKYGIPSWLYNRRRDPET 93
Query: 296 GKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
GK L ++ + D++R +I + RG RH GL VRGQ
Sbjct: 94 GKDLHLVGNDYKITMEFDIKREMQINSWRGYRHREGLPVRGQ 135
>UniRef50_A4WM28 Cluster: 30S ribosomal protein S13P; n=2;
Thermoproteaceae|Rep: 30S ribosomal protein S13P -
Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321)
Length = 152
Score = 68.9 bits (161), Expect = 7e-11
Identities = 37/112 (33%), Positives = 61/112 (54%)
Frame = +2
Query: 86 NARLCSAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDW 265
N ++ A+ I+G+G + + K ID G EE++ K+ + N + P W
Sbjct: 19 NKQVAYALAKIRGIGIASAYAICWKLGIDPHAVLGALPEEQINKLDWAVRNLHEVA-PAW 77
Query: 266 FLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
FLNR+KD G+ L S L + D++ +KK+++ +G+RH GL+VRGQ
Sbjct: 78 FLNRRKDPETGRDMHLIGSELVLAAKRDVDLMKKLKSWKGIRHSLGLKVRGQ 129
>UniRef50_Q00VP7 Cluster: Chromosome 14 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 14 contig 1, DNA
sequence - Ostreococcus tauri
Length = 272
Score = 59.3 bits (137), Expect = 5e-08
Identities = 35/103 (33%), Positives = 53/103 (51%)
Frame = -2
Query: 424 VLTTHTKAPVMSHPSVSANLLEPLQIFTEF*IQVGGGQLAVFTINNILLPI*EPVWYLIL 245
VLTT T APV+S SV +NLL+ L++ + +++ G L I I+L + EP+ L
Sbjct: 44 VLTTDTDAPVVSQTSVVSNLLQTLEVVAQLRVELVGHHLRELAILEIVLAVQEPIRNSEL 103
Query: 244 XRIRHDSDNFFNLFFCAFASTLVKINVGFFENNVGVPPANTFD 116
R+ HD F L L +I++ F + VG A+ D
Sbjct: 104 SRVGHDHHQRFQLRGGELPGALPEIDLSLFAHQVGEAAADPLD 146
>UniRef50_UPI0001555DA0 Cluster: PREDICTED: similar to olfactory
specific medium-chain acyl CoA synthetase; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
olfactory specific medium-chain acyl CoA synthetase -
Ornithorhynchus anatinus
Length = 176
Score = 58.0 bits (134), Expect = 1e-07
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +2
Query: 230 MSNPXQYKIPDWFLNRQKDIVDGKYSQL 313
M NP QYKIPDWFLNRQKD+ DGKYSQ+
Sbjct: 1 MQNPRQYKIPDWFLNRQKDVKDGKYSQV 28
>UniRef50_Q9X1I5 Cluster: 30S ribosomal protein S13; n=14;
Bacteria|Rep: 30S ribosomal protein S13 - Thermotoga
maritima
Length = 125
Score = 51.6 bits (118), Expect = 1e-05
Identities = 41/112 (36%), Positives = 60/112 (53%)
Frame = +2
Query: 86 NARLCSAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDW 265
N ++ A+T I G+GR S +LK ID +KR G+ T+EE+ KI +Y I D
Sbjct: 12 NKKVWVALTYIYGIGRSRSFEILKNTGIDPEKRVGDLTDEEISKI-------TKY-IQDH 63
Query: 266 FLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
F V+G+ L S++ ++ RL +I +RG+RH GL VRGQ
Sbjct: 64 FK------VEGE--------LRSEVERNIRRLIEIGCYRGIRHKLGLPVRGQ 101
>UniRef50_Q7QRY8 Cluster: GLP_549_7513_8304; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_549_7513_8304 - Giardia lamblia ATCC
50803
Length = 263
Score = 40.7 bits (91), Expect = 0.021
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Frame = -2
Query: 424 VLTTHTKAPVMSHPSVSANLLEPLQIFTEF*IQVGGG---QLAVFTINNILLPI*EPVWY 254
VL + + V++ +++A+ E LQ+ T + G G + VF I++ I P W
Sbjct: 29 VLPANLQVVVVADTALAASFTETLQVRT---VGRGYGIDQNVHVFARFKIIVTIKHPGWN 85
Query: 253 LILXRIRHDSDNFFNLFFCAFASTLVKINVGFFENNVGVPPANTFDS 113
+ + D L C S V +NVGF E N+G N +S
Sbjct: 86 AVGEGVLKDLHESILLGRCELTSAFVNVNVGFLEGNIGKAAPNPLNS 132
>UniRef50_O66486 Cluster: 30S ribosomal protein S13; n=28; cellular
organisms|Rep: 30S ribosomal protein S13 - Aquifex
aeolicus
Length = 126
Score = 40.3 bits (90), Expect = 0.027
Identities = 33/112 (29%), Positives = 52/112 (46%)
Frame = +2
Query: 86 NARLCSAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDW 265
N RL A+T I G+G + + +K I KR GE T +E
Sbjct: 12 NKRLEVALTYIYGIGWSRAREICEKTGIPCTKRVGELTPDE------------------- 52
Query: 266 FLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
LN + +D Y +L +++ ++++LK + +RG+RH GL VRGQ
Sbjct: 53 -LNTLRKFIDENYK--VEGDLRREVQLNIKKLKDMGCYRGIRHARGLPVRGQ 101
>UniRef50_Q601J1 Cluster: 30S ribosomal protein S13; n=3; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S13 -
Mycoplasma hyopneumoniae (strain 232)
Length = 137
Score = 37.9 bits (84), Expect = 0.14
Identities = 29/111 (26%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Frame = +2
Query: 92 RLCSAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYK-IPDWF 268
R+ A+ +I G+G+ + +++K + EE+ K I++ + K I +
Sbjct: 14 RIVIALCSIFGIGKSLATEIVEKT--------AKLQEEKFGKKFPILTENTKVKEINEEV 65
Query: 269 LNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
L +D+ + T +L +++ +++RL +I+ +RG+RH GL VRGQ
Sbjct: 66 LQVIRDVAK---TYKTEGDLHREVQSNIKRLIEIKCYRGIRHRKGLPVRGQ 113
>UniRef50_A0CSW0 Cluster: Chromosome undetermined scaffold_26, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_26,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 367
Score = 35.9 bits (79), Expect = 0.58
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +2
Query: 137 YSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFLNRQKDIVDG 298
Y N + D + DK + E ++E E++IT++ KI DW +KD+ DG
Sbjct: 93 YQNAIDSAQD-EKDKYSRETLQKEKEELITLICEMKHSKIEDWLKTIKKDLPDG 145
>UniRef50_A6RYD3 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 82
Score = 35.9 bits (79), Expect = 0.58
Identities = 14/35 (40%), Positives = 26/35 (74%)
Frame = +2
Query: 320 SNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 424
+ L +L++++ER++ + ++RG RH GL VRGQ+
Sbjct: 5 TELKRRLQDNIERMRTMGSYRGRRHAMGLPVRGQN 39
>UniRef50_P46747 Cluster: Mitochondrial ribosomal protein S13; n=1;
Prototheca wickerhamii|Rep: Mitochondrial ribosomal
protein S13 - Prototheca wickerhamii
Length = 119
Score = 35.5 bits (78), Expect = 0.77
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 314 TSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
T S++ R++++RL I ++RG RH GL VRGQ
Sbjct: 66 TGSDVRRFTRQNIQRLVNIHSYRGYRHIQGLPVRGQ 101
>UniRef50_A6PT06 Cluster: Ribosomal protein S13; n=1; Victivallis
vadensis ATCC BAA-548|Rep: Ribosomal protein S13 -
Victivallis vadensis ATCC BAA-548
Length = 131
Score = 35.1 bits (77), Expect = 1.0
Identities = 31/112 (27%), Positives = 52/112 (46%)
Frame = +2
Query: 86 NARLCSAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDW 265
N R+ ++ + GVG + +++K ID D +A + T +++ I I+
Sbjct: 12 NKRVEFSLRYLYGVGPAKALEIIQKVGIDPDLKAKDLTPDQIGAITKIL----------- 60
Query: 266 FLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
Q D+ L +L L D+ RL++I +RG+RH L VRGQ
Sbjct: 61 ----QDDL-------LVEGDLRRTLAADIRRLQQINCYRGIRHRRSLPVRGQ 101
>UniRef50_Q4WP11 Cluster: 40S ribosomal protein S13; n=5;
Eurotiomycetidae|Rep: 40S ribosomal protein S13 -
Aspergillus fumigatus (Sartorya fumigata)
Length = 169
Score = 34.7 bits (76), Expect = 1.3
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +2
Query: 320 SNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
++L ++ +D++RLK+ ++RG RH GL VRGQ
Sbjct: 103 NDLRRQILDDIKRLKESGSYRGRRHALGLPVRGQ 136
>UniRef50_Q4PDK9 Cluster: Putative uncharacterized protein; n=2;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 503
Score = 34.7 bits (76), Expect = 1.3
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +3
Query: 9 LNQNVAGHSRQISTYSSYHEYEHRWQTQGYVRR*RLSKVLAGGTPTLFSKKPTLILTSVL 188
L+Q+ R S +S E+ RW T +R SK+LA G F+ P IL +V
Sbjct: 284 LDQDAVTRPRCRSYWSLEEEHRERWGTGRVIRFESFSKILAAGLRLGFATGPNEILDAVD 343
Query: 189 AN 194
AN
Sbjct: 344 AN 345
>UniRef50_A1CXK9 Cluster: 40S ribosomal protein S13; n=7;
Pezizomycotina|Rep: 40S ribosomal protein S13 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 118
Score = 34.7 bits (76), Expect = 1.3
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +2
Query: 320 SNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
++L ++ +D++RLK+ ++RG RH GL VRGQ
Sbjct: 66 NDLRRQILDDIKRLKESGSYRGRRHALGLPVRGQ 99
>UniRef50_Q0QIP8 Cluster: Ribosomal protein S13; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S13 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 117
Score = 34.3 bits (75), Expect = 1.8
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 335 KLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
K RE+++RL +I ++RG RH GL RGQ
Sbjct: 72 KKRENIQRLVRISSYRGFRHTAGLPCRGQ 100
>UniRef50_Q5B4R2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 130
Score = 34.3 bits (75), Expect = 1.8
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +2
Query: 320 SNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
++L ++ +D++RLK+ +RG RH GL VRGQ
Sbjct: 65 NDLRRQVLDDIKRLKETGTYRGRRHALGLPVRGQ 98
>UniRef50_O59772 Cluster: Mitochondrial ribosomal protein subunit
S37; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S37 - Schizosaccharomyces
pombe (Fission yeast)
Length = 151
Score = 33.9 bits (74), Expect = 2.4
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2
Query: 347 DLERLKKIRAHRGMRHYWGLRVRGQH 424
D+ RL IR +RGMRH GL V GQ+
Sbjct: 76 DISRLVNIRCYRGMRHVNGLPVNGQN 101
>UniRef50_Q8FS35 Cluster: 30S ribosomal protein S13; n=42;
Bacteria|Rep: 30S ribosomal protein S13 -
Corynebacterium efficiens
Length = 122
Score = 33.9 bits (74), Expect = 2.4
Identities = 26/112 (23%), Positives = 53/112 (47%)
Frame = +2
Query: 86 NARLCSAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDW 265
N R+ A+T I G+G + +L++ + D R T+E++ +
Sbjct: 12 NKRMEIALTYIYGIGPARAKQLLEETGVSPDLRTDNLTDEQIASL--------------- 56
Query: 266 FLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
+D+++ + +L +++ D+ R +I +++G+RH GL VRGQ
Sbjct: 57 -----RDVIEATWK--VEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVRGQ 101
>UniRef50_Q9TCB7 Cluster: Ribosomal protein S13; n=1; Nephroselmis
olivacea|Rep: Ribosomal protein S13 - Nephroselmis
olivacea
Length = 125
Score = 33.5 bits (73), Expect = 3.1
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 305 SQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
S +T S L +++D+ RL I +RG R+ L VRGQ
Sbjct: 63 SYVTGSKLKRTIQQDMSRLISISCYRGFRYIQKLPVRGQ 101
>UniRef50_Q5NQ42 Cluster: 30S ribosomal protein S13; n=107; cellular
organisms|Rep: 30S ribosomal protein S13 - Zymomonas
mobilis
Length = 122
Score = 33.5 bits (73), Expect = 3.1
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +2
Query: 212 EKIITIMSNPXQYKIPDWFLNRQ---KDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHR 382
+KI+T + + ++ D N ++ +D Y+ +L ++ +++RL + +R
Sbjct: 31 KKIVTKLGIAPERRVQDLSDNEVLQIREAIDADYT--VEGDLRRQVAMNIKRLMDLACYR 88
Query: 383 GMRHYWGLRVRGQ 421
G+RH GL VRGQ
Sbjct: 89 GLRHRKGLPVRGQ 101
>UniRef50_A7PUB9 Cluster: Chromosome chr7 scaffold_31, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_31, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 48
Score = 33.1 bits (72), Expect = 4.1
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +3
Query: 9 LNQNVAGHSRQISTYSSYHEYEHRWQTQGYV 101
L+ +V G R IST++S ++E RW+T+ +V
Sbjct: 5 LSMSVLGSERGISTHTSCAQHERRWETEDHV 35
>UniRef50_O21258 Cluster: Ribosomal protein S13; n=1; Reclinomonas
americana|Rep: Ribosomal protein S13 - Reclinomonas
americana
Length = 122
Score = 33.1 bits (72), Expect = 4.1
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 311 LTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
L S L +++RL I+++RG+RH +GL V GQ
Sbjct: 65 LIESELRKNQTYNIKRLLDIKSYRGLRHAYGLPVHGQ 101
>UniRef50_Q6CFI9 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=2;
Saccharomycetales|Rep: Yarrowia lipolytica chromosome B
of strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 156
Score = 33.1 bits (72), Expect = 4.1
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 320 SNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
S+L K+ D+ER +K ++ G RH G+ V+GQ
Sbjct: 70 SDLAKKINADIERKRKTGSYVGRRHVMGMPVKGQ 103
>UniRef50_A6LXE0 Cluster: Putative uncharacterized protein
precursor; n=1; Clostridium beijerinckii NCIMB 8052|Rep:
Putative uncharacterized protein precursor - Clostridium
beijerinckii NCIMB 8052
Length = 445
Score = 32.7 bits (71), Expect = 5.4
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Frame = +2
Query: 71 RTSMANARLCSAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVE----KIITIMSN 238
+T+ + A L +T V +RY+ I+LKK DID K E +++ K+ ++
Sbjct: 132 QTAQSEAFLHDQIT--NDVTKRYNAIILKKIDIDKLKTGLEIKNNDLDALKIKVSVGLAI 189
Query: 239 PXQYKIPDWFLNRQKDIVDGKYSQLTSSNLD 331
P Q + LN+ +D + K + L +NLD
Sbjct: 190 PNQLEDKQIELNKAQDEIKAKENSL-KNNLD 219
>UniRef50_Q8W9S0 Cluster: Ribosomal protein S13; n=1; Mesostigma
viride|Rep: Ribosomal protein S13 - Mesostigma viride
Length = 116
Score = 32.7 bits (71), Expect = 5.4
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 326 LDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
L +++ + ERL KI ++RG RH+ GL RGQ
Sbjct: 72 LINRIHLNKERLIKISSYRGFRHHRGLPARGQ 103
>UniRef50_Q026Q4 Cluster: Trigger factor; n=1; Solibacter usitatus
Ellin6076|Rep: Trigger factor - Solibacter usitatus
(strain Ellin6076)
Length = 422
Score = 32.3 bits (70), Expect = 7.2
Identities = 18/73 (24%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +2
Query: 179 KRAGECTEEEVEKIITIMSNPXQYKIPDWFLNRQ-KDIVDGKYSQLTSSNLD-SKLREDL 352
+R E +E KI+ + + ++ +P+ F+ RQ ++ V+ + +D SKL+ D
Sbjct: 272 QRQYEAQQEAKNKIVDKLVDAHEFPVPEVFVERQIRNRVEQSLRAMAEQGVDPSKLKLDW 331
Query: 353 ERLKKIRAHRGMR 391
E++K+ + + R
Sbjct: 332 EKVKEAQREKATR 344
>UniRef50_A6Q707 Cluster: Periplasmic nitrate reductase component
NapD; n=1; Sulfurovum sp. NBC37-1|Rep: Periplasmic
nitrate reductase component NapD - Sulfurovum sp.
(strain NBC37-1)
Length = 119
Score = 32.3 bits (70), Expect = 7.2
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 188 GECTEEEVEKIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSN-LDSKLREDLERLK 364
G+ EEE+EK++ I P D + Q+D +D + +L N + L +D ++
Sbjct: 46 GKGVEEEIEKLVKIQRLP-NVIAADMMMTYQEDELDAEVKRLEEENPVPDVLNDDDIDVR 104
Query: 365 KIRAHRGMRH 394
+ H +RH
Sbjct: 105 DVEYHGDLRH 114
>UniRef50_A4ELR9 Cluster: Phospholipase D, putative; n=1;
Roseobacter sp. CCS2|Rep: Phospholipase D, putative -
Roseobacter sp. CCS2
Length = 513
Score = 32.3 bits (70), Expect = 7.2
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 195 HSPARLSRSMSAFLRTMLEYLRPTPLIAVIAE-HNLAFA 82
+ P +L R+MSA R L Y+ P P+I+ IA+ H A A
Sbjct: 259 YRPKKLLRTMSAKRRFALPYMSPRPIISEIADAHRTAIA 297
>UniRef50_A0DZU7 Cluster: Chromosome undetermined scaffold_70, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_70,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 713
Score = 32.3 bits (70), Expect = 7.2
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +2
Query: 137 YSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPXQYKIPDWFLNRQK 283
Y + +K ++D K C ++E+EK + SNP + W + +K
Sbjct: 533 YMKVQGQKNELDFHKLINSCLDKEIEKNLKNFSNPATIDLYPWMIKYRK 581
>UniRef50_P42732 Cluster: 30S ribosomal protein S13, chloroplast
precursor; n=6; cellular organisms|Rep: 30S ribosomal
protein S13, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 32.3 bits (70), Expect = 7.2
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 350 LERLKKIRAHRGMRHYWGLRVRGQ 421
++RLK+I+ +RG+RH GL RGQ
Sbjct: 122 IKRLKEIQCYRGVRHIQGLPCRGQ 145
>UniRef50_Q6YPQ1 Cluster: DNA glycosylase; n=4; Candidatus
Phytoplasma|Rep: DNA glycosylase - Onion yellows
phytoplasma
Length = 276
Score = 31.9 bits (69), Expect = 9.5
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +2
Query: 32 FQTNFNIFFVS*IRTSMANARLCSAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEV 211
F+ N + + ++T A ++ I G+G Y N VL + + +A E + E+V
Sbjct: 136 FEINPAVLYQKILKTKSALKKVLLNQKIISGLGNIYVNEVLFLVKLHPETKACELSLEQV 195
Query: 212 EKIITI 229
++I+TI
Sbjct: 196 QEIVTI 201
>UniRef50_A3IUX9 Cluster: Putative uncharacterized protein; n=1;
Cyanothece sp. CCY 0110|Rep: Putative uncharacterized
protein - Cyanothece sp. CCY 0110
Length = 227
Score = 31.9 bits (69), Expect = 9.5
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +2
Query: 257 PDWFLNRQK--DIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 421
P W +++ ++ + + L D+ L DL+ K + A G+R YW + VRG+
Sbjct: 109 PTWEAGQRRYINLAEVRVPDLVGEVGDTTLATDLDEKKHLYAKLGIREYWVIDVRGK 165
>UniRef50_Q7PZ56 Cluster: ENSANGP00000008877; n=2; Culicidae|Rep:
ENSANGP00000008877 - Anopheles gambiae str. PEST
Length = 887
Score = 31.9 bits (69), Expect = 9.5
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +2
Query: 230 MSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYW 400
M P + + +W +K VD ++L +L E LER++ RA ++ YW
Sbjct: 214 MLYPVKRTVYNWDFRMKKKDVDDAAAELAQVEAAKRLEEALERIRLNRAAAKIQRYW 270
>UniRef50_P15758 Cluster: Mitochondrial ribosomal protein S13; n=4;
Magnoliophyta|Rep: Mitochondrial ribosomal protein S13 -
Oenothera bertiana (Bertero's evening primrose)
Length = 114
Score = 31.9 bits (69), Expect = 9.5
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 341 REDLERLKKIRAHRGMRHYWGLRVRGQ 421
R D+ER I +RG+RH GL +RGQ
Sbjct: 73 RADIERFISISCYRGIRHQDGLPLRGQ 99
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 473,700,369
Number of Sequences: 1657284
Number of extensions: 9123253
Number of successful extensions: 27009
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 26376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26997
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33873797511
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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