Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2011
(650 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 33 0.88
U49070-1|AAC50492.1| 163|Homo sapiens Pin1 protein. 31 3.6
CR407654-1|CAG28582.1| 163|Homo sapiens UBL5 protein. 31 3.6
BT019331-1|AAV38138.1| 163|Homo sapiens protein (peptidyl-proly... 31 3.6
BC002899-1|AAH02899.1| 163|Homo sapiens protein (peptidylprolyl... 31 3.6
AY210419-1|AAO34702.1| 3501|Homo sapiens CUB and sushi multiple ... 31 3.6
AB114605-1|BAC82444.1| 3667|Homo sapiens CSMD3 protein isoform 2... 31 3.6
AB114604-1|BAC82443.1| 3707|Homo sapiens CSMD3 protein isoform 1... 31 3.6
AB067481-1|BAB67787.2| 2977|Homo sapiens KIAA1894 protein protein. 31 3.6
BC066654-1|AAH66654.1| 403|Homo sapiens jumonji domain containi... 30 8.2
BC047003-1|AAH47003.1| 441|Homo sapiens JMJD6 protein protein. 30 8.2
AB073711-1|BAC16755.1| 372|Homo sapiens phosphatidylserine rece... 30 8.2
AB011157-1|BAA25511.1| 416|Homo sapiens KIAA0585 protein protein. 30 8.2
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 33.1 bits (72), Expect = 0.88
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -1
Query: 461 YFSSLPPRAGSG*FARLLPSLDVVAVSQAPSPESNPDSPLPVTTMVVA 318
+ ++ P S F+ + PS+ + + SPES P SPLPVT ++ +
Sbjct: 5621 WMTTPPVEETSSGFSLMSPSMTSPSPVSSTSPESIPSSPLPVTALLTS 5668
>U49070-1|AAC50492.1| 163|Homo sapiens Pin1 protein.
Length = 163
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 475 LTRPRNRNEYTLNILTRNNWRAGSGASSDYDKNG-GQSSNVDSGRXXVXYXSGRRPEA 645
++R R Y +I + W SG SS KNG G+ + V V + RRP +
Sbjct: 15 MSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHLLVKHSQSRRPSS 72
>CR407654-1|CAG28582.1| 163|Homo sapiens UBL5 protein.
Length = 163
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 475 LTRPRNRNEYTLNILTRNNWRAGSGASSDYDKNG-GQSSNVDSGRXXVXYXSGRRPEA 645
++R R Y +I + W SG SS KNG G+ + V V + RRP +
Sbjct: 15 MSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHLLVKHSQSRRPSS 72
>BT019331-1|AAV38138.1| 163|Homo sapiens protein (peptidyl-prolyl
cis/trans isomerase) NIMA-interacting 1 protein.
Length = 163
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 475 LTRPRNRNEYTLNILTRNNWRAGSGASSDYDKNG-GQSSNVDSGRXXVXYXSGRRPEA 645
++R R Y +I + W SG SS KNG G+ + V V + RRP +
Sbjct: 15 MSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHLLVKHSQSRRPSS 72
>BC002899-1|AAH02899.1| 163|Homo sapiens protein (peptidylprolyl
cis/trans isomerase) NIMA-interacting 1 protein.
Length = 163
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 475 LTRPRNRNEYTLNILTRNNWRAGSGASSDYDKNG-GQSSNVDSGRXXVXYXSGRRPEA 645
++R R Y +I + W SG SS KNG G+ + V V + RRP +
Sbjct: 15 MSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHLLVKHSQSRRPSS 72
>AY210419-1|AAO34702.1| 3501|Homo sapiens CUB and sushi multiple
domains 3 protein.
Length = 3501
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = -3
Query: 465 SLFFVTTSPCREWVICAPAAFLGCGSRFSGSLSG--IEP*FPVTRDNH 328
SL T R W P+ CG RF G SG + P +P DN+
Sbjct: 1250 SLLKCMTGERRAWDYPLPSCIAECGGRFKGESSGRILSPGYPFPYDNN 1297
>AB114605-1|BAC82444.1| 3667|Homo sapiens CSMD3 protein isoform 2
protein.
Length = 3667
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = -3
Query: 465 SLFFVTTSPCREWVICAPAAFLGCGSRFSGSLSG--IEP*FPVTRDNH 328
SL T R W P+ CG RF G SG + P +P DN+
Sbjct: 1351 SLLKCMTGERRAWDYPLPSCIAECGGRFKGESSGRILSPGYPFPYDNN 1398
>AB114604-1|BAC82443.1| 3707|Homo sapiens CSMD3 protein isoform 1
protein.
Length = 3707
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = -3
Query: 465 SLFFVTTSPCREWVICAPAAFLGCGSRFSGSLSG--IEP*FPVTRDNH 328
SL T R W P+ CG RF G SG + P +P DN+
Sbjct: 1391 SLLKCMTGERRAWDYPLPSCIAECGGRFKGESSGRILSPGYPFPYDNN 1438
>AB067481-1|BAB67787.2| 2977|Homo sapiens KIAA1894 protein protein.
Length = 2977
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = -3
Query: 465 SLFFVTTSPCREWVICAPAAFLGCGSRFSGSLSG--IEP*FPVTRDNH 328
SL T R W P+ CG RF G SG + P +P DN+
Sbjct: 731 SLLKCMTGERRAWDYPLPSCIAECGGRFKGESSGRILSPGYPFPYDNN 778
>BC066654-1|AAH66654.1| 403|Homo sapiens jumonji domain containing
6 protein.
Length = 403
Score = 29.9 bits (64), Expect = 8.2
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Frame = -1
Query: 599 ESTFDD*PPFLS*SELAPDPALQLFL--VKIFKVYS---FRLRGLVR-VPYRYFSSLPPR 438
EST DD P ++ S P + L K+ K ++ F+ G R PYR+F PPR
Sbjct: 122 ESTRDDSPLYIFDSSYGEHPKRRKLLEDYKVPKFFTDDLFQYAGEKRRPPYRWFVMGPPR 181
Query: 437 AGSG 426
+G+G
Sbjct: 182 SGTG 185
>BC047003-1|AAH47003.1| 441|Homo sapiens JMJD6 protein protein.
Length = 441
Score = 29.9 bits (64), Expect = 8.2
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Frame = -1
Query: 599 ESTFDD*PPFLS*SELAPDPALQLFL--VKIFKVYS---FRLRGLVR-VPYRYFSSLPPR 438
EST DD P ++ S P + L K+ K ++ F+ G R PYR+F PPR
Sbjct: 160 ESTRDDSPLYIFDSSYGEHPKRRKLLEDYKVPKFFTDDLFQYAGEKRRPPYRWFVMGPPR 219
Query: 437 AGSG 426
+G+G
Sbjct: 220 SGTG 223
>AB073711-1|BAC16755.1| 372|Homo sapiens phosphatidylserine
receptor beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 8.2
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Frame = -1
Query: 599 ESTFDD*PPFLS*SELAPDPALQLFL--VKIFKVYS---FRLRGLVR-VPYRYFSSLPPR 438
EST DD P ++ S P + L K+ K ++ F+ G R PYR+F PPR
Sbjct: 122 ESTRDDSPLYIFDSSYGEHPKRRKLLEDYKVPKFFTDDLFQYAGEKRRPPYRWFVMGPPR 181
Query: 437 AGSG 426
+G+G
Sbjct: 182 SGTG 185
>AB011157-1|BAA25511.1| 416|Homo sapiens KIAA0585 protein protein.
Length = 416
Score = 29.9 bits (64), Expect = 8.2
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Frame = -1
Query: 599 ESTFDD*PPFLS*SELAPDPALQLFL--VKIFKVYS---FRLRGLVR-VPYRYFSSLPPR 438
EST DD P ++ S P + L K+ K ++ F+ G R PYR+F PPR
Sbjct: 124 ESTRDDSPLYIFDSSYGEHPKRRKLLEDYKVPKFFTDDLFQYAGEKRRPPYRWFVMGPPR 183
Query: 437 AGSG 426
+G+G
Sbjct: 184 SGTG 187
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,684,118
Number of Sequences: 237096
Number of extensions: 2187138
Number of successful extensions: 5465
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5465
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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