Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2010
(828 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0145 + 28012268-28012624,28012734-28012794,28013758-280138... 159 2e-39
01_02_0039 - 10490522-10490606,10490674-10490810,10491107-104912... 151 5e-37
05_01_0273 + 2115257-2115589,2115706-2115766,2115876-2115970,211... 151 7e-37
01_05_0795 + 25287449-25287967,25288078-25288138,25288640-252887... 148 6e-36
01_06_0158 - 27079262-27079346,27079662-27079750,27080540-270806... 57 2e-08
11_01_0028 - 215821-215880,216114-216284 52 7e-07
06_03_1205 - 28406183-28406218,28406462-28406548,28406769-284068... 30 2.6
04_03_0444 - 16006619-16006733,16006754-16007048,16008265-16008967 30 2.6
10_08_0121 + 14977645-14977734,14978975-14979062,14979271-14979617 29 3.4
10_06_0011 - 9581916-9582167,9582523-9582574,9584105-9584331 29 3.4
06_03_0169 - 17457929-17457988,17458086-17458192,17458383-174584... 29 3.4
05_07_0198 - 28359092-28359457,28359574-28359729,28359844-283600... 29 3.4
03_04_0069 - 17022468-17023361 29 3.4
02_05_0159 - 26368562-26369239,26371374-26371853 29 3.4
12_02_0913 + 24246217-24247557 29 4.5
12_01_0940 - 9303549-9303723,9303816-9303893,9304055-9304110,930... 29 4.5
11_02_0009 - 7315669-7315686,7316239-7316259,7316425-7316519,731... 29 4.5
10_06_0030 - 9834515-9834608,9834784-9835277 29 4.5
06_03_0178 + 17594062-17595576 29 4.5
04_02_0002 + 8412568-8412781,8412915-8413015,8413114-8413185,841... 29 4.5
05_04_0125 - 18241542-18242129 29 6.0
02_05_0880 + 32466538-32467083,32467333-32467644,32467731-324682... 29 6.0
01_06_0039 + 25857805-25858894,25858997-25859345,25860019-258601... 29 6.0
10_06_0145 + 11215895-11216860 28 7.9
08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187 28 7.9
06_01_0754 - 5644310-5646292 28 7.9
01_06_0457 - 29524544-29525962,29526518-29526606,29526841-295268... 28 7.9
>05_07_0145 +
28012268-28012624,28012734-28012794,28013758-28013852,
28013944-28014056,28014436-28014604,28014677-28014716,
28014797-28014861,28015485-28015598,28015687-28015751,
28015927-28016083,28016167-28016286,28016447-28016535,
28016631-28016715
Length = 509
Score = 159 bits (387), Expect = 2e-39
Identities = 79/167 (47%), Positives = 104/167 (62%), Gaps = 3/167 (1%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPV 181
+GS++GF S D VTVG L V+ Q F EA EPGL F+ AKFDGILG+ F I+V PV
Sbjct: 149 TGSIAGFFSEDSVTVGDLVVKDQEFIEATKEPGLTFMVAKFDGILGLGFQEISVGDAVPV 208
Query: 182 FDNMVAXGLV-QPVFSFYLNRDPGATTXXXXXXXXSDPAHYRGDLVRVPLLRDTYWEFHM 358
+ MV GLV +PVFSF+ NR DP+HY+G+ VP+ + YW+F M
Sbjct: 209 WYKMVEQGLVSEPVFSFWFNRHSDEGEGGEIVFGGMDPSHYKGNHTYVPVSQKGYWQFEM 268
Query: 359 DSVNV--NASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAI 493
V + + FCA GCSAIAD+GTSL+AGP+ + +N +GAT +
Sbjct: 269 GDVLIGGKTTGFCASGCSAIADSGTSLLAGPTAIITEINEKIGATGV 315
Score = 37.1 bits (82), Expect = 0.017
Identities = 21/64 (32%), Positives = 27/64 (42%)
Frame = +3
Query: 489 PSPSGSTSWTAASYRTCRESPLPSPGNDFTLEGNELXAPGWHNFGHTVCLSGFMALDVPK 668
PSP G +S S + E G F L+ E C+SGF A+D+P
Sbjct: 418 PSPMGESSVDCGSLASMPEISFTIGGKKFALKPEEYILKVGEGAA-AQCISGFTAMDIPP 476
Query: 669 PMGP 680
P GP
Sbjct: 477 PRGP 480
>01_02_0039 -
10490522-10490606,10490674-10490810,10491107-10491248,
10491355-10491419,10491528-10491641,10491846-10492119,
10492215-10492327,10492405-10492499,10492602-10492662,
10492774-10493103
Length = 471
Score = 151 bits (367), Expect = 5e-37
Identities = 75/167 (44%), Positives = 101/167 (60%), Gaps = 3/167 (1%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPV 181
SGS++GF S D V VG L V+ Q F E EP L F+ KFDGILG+ F I+V P+
Sbjct: 140 SGSIAGFFSEDSVLVGDLAVKNQMFIETTREPSLTFIIGKFDGILGLGFPEISVGGAPPI 199
Query: 182 FDNMVAXGLVQ-PVFSFYLNRDPGATTXXXXXXXXSDPAHYRGDLVRVPLLRDTYWEFHM 358
+ M L++ VFSF+LNRDP A T DP HY+G VP+ R YW+F M
Sbjct: 200 WQGMKEQQLIEKDVFSFWLNRDPDAPTGGELIFGGVDPNHYKGSHTYVPVTRKGYWQFEM 259
Query: 359 DSVNVN--ASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAI 493
+ ++ ++ FC+ GC+AIAD+GTSL+ GP+ V +N A+GA I
Sbjct: 260 GDLLIDDYSTGFCSGGCAAIADSGTSLLGGPTTIVAQINHAIGAEGI 306
Score = 38.7 bits (86), Expect = 0.006
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3
Query: 621 GHTVCLSGFMALDVPKPMGP 680
G TVC+SGFMA DVP P GP
Sbjct: 407 GQTVCISGFMAFDVPPPRGP 426
>05_01_0273 +
2115257-2115589,2115706-2115766,2115876-2115970,
2116072-2116184,2116278-2116551,2116923-2117036,
2117169-2117233,2117325-2117466,2117547-2117666,
2118153-2118241,2118349-2118433
Length = 496
Score = 151 bits (366), Expect = 7e-37
Identities = 74/167 (44%), Positives = 106/167 (63%), Gaps = 3/167 (1%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPV 181
SG++SGF S D+V VG L V+ Q F EA E + F+ KFDGILG+ + I+V P+
Sbjct: 141 SGAISGFFSKDNVLVGDLVVKNQKFIEATRETSVTFIIGKFDGILGLGYPEISVGKAPPI 200
Query: 182 FDNMVAXGLV-QPVFSFYLNRDPGATTXXXXXXXXSDPAHYRGDLVRVPLLRDTYWEFHM 358
+ +M L+ VFSF+LNRDP A++ DP HY+GD VP+ R YW+F+M
Sbjct: 201 WQSMQEQELLADDVFSFWLNRDPDASSGGELVFGGMDPKHYKGDHTYVPVSRKGYWQFNM 260
Query: 359 DS--VNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAI 493
++ +++ FCA+GC+AI D+GTSL+AGP+ V +N A+GA I
Sbjct: 261 GDLLIDGHSTGFCAKGCAAIVDSGTSLLAGPTAIVAQVNHAIGAEGI 307
Score = 38.3 bits (85), Expect = 0.007
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 621 GHTVCLSGFMALDVPKPMGP 680
G TVC+SGFMA D+P P GP
Sbjct: 448 GQTVCISGFMAFDIPPPRGP 467
>01_05_0795 +
25287449-25287967,25288078-25288138,25288640-25288734,
25288827-25288939,25289480-25289648,25289777-25289816,
25289906-25289970,25290150-25290263,25290398-25290462,
25290572-25290725,25290798-25290914,25292489-25292545
Length = 522
Score = 148 bits (358), Expect = 6e-36
Identities = 73/168 (43%), Positives = 100/168 (59%), Gaps = 3/168 (1%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPV 181
+GS+ G+ S D VT+G L V Q F EA EPGL F+AAKFDGILG+ F I+V+ PV
Sbjct: 203 TGSIHGYYSQDQVTIGDLVVNNQEFIEATHEPGLTFLAAKFDGILGLGFKEISVEGADPV 262
Query: 182 FDNMVAXGLV-QPVFSFYLNRDPGATTXXXXXXXXSDPAHYRGDLVRVPLLRDTYWEFHM 358
+ NM+ LV VFSF+LNR+ +D +HY+GD + R YW+F M
Sbjct: 263 WYNMIQQSLVTDKVFSFWLNRNANDINGGEIVFGGADESHYKGDHTYTRVTRKAYWQFEM 322
Query: 359 DS--VNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAIA 496
+ ++ C GC+ IAD+GTSLIAGP + ++A +GAT +A
Sbjct: 323 GDFLIGGRSTGICVDGCAVIADSGTSLIAGPIAAIAQIHAHIGATGVA 370
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 452 EVEALNAAVGATAIAFGQYVVDCSLIPHLPRVTFTIAGK 568
++E N G G YV DC I HLP V F+I G+
Sbjct: 459 KLEYANQLCGNMPSPVGSYV-DCRHIGHLPNVAFSIGGR 496
>01_06_0158 -
27079262-27079346,27079662-27079750,27080540-27080659,
27080738-27080894,27081167-27081231,27081323-27081436,
27082109-27082178,27082412-27082642,27082963-27083039,
27083143-27083237,27084514-27084574,27084678-27085073
Length = 519
Score = 56.8 bits (131), Expect = 2e-08
Identities = 50/168 (29%), Positives = 72/168 (42%), Gaps = 4/168 (2%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPV 181
+G++SG+ S D V VG + V+ Q V L A F G L + S V +
Sbjct: 162 TGAISGYFSQDSVKVGDVAVKNQLRGSQVLHSWLQSSMA-FLG-LDLRKSRFPVTDIAKQ 219
Query: 182 FD--NMVAXGLV-QPVFSFYLNRDPGATTXXXXXXXXSDPAHYRGDLVRVPLLRDTYWEF 352
NMV GLV PVFSF+ NR DP HY+G+ VP+ R YW+
Sbjct: 220 THRYNMVRQGLVVDPVFSFWFNRHADEGQGGEIVFGGIDPNHYKGNHTYVPVTRKGYWQ- 278
Query: 353 HMDSVNVNASRFCAQGCSAIADTG-TSLIAGPSKEVEALNAAVGATAI 493
+D + C+ CS T+ + + +N +GAT +
Sbjct: 279 -VDLILKLVGILCSWVCSNSRFWNFTAYWSHGMAIITQINEKIGATGV 325
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +3
Query: 489 PSPSGSTSWTAASYRTCRESPLPSPGNDFTLEGNELXAPGWHNFGHTVCLSGFMALDVPK 668
PSP G +S +S + + GN F L+ + T C+SGF A+D+P
Sbjct: 428 PSPMGESSVDCSSLASMPDIAFTIGGNKFVLKPEQYILKVGEGTA-TQCISGFTAMDIPP 486
Query: 669 PMGP 680
P GP
Sbjct: 487 PRGP 490
>11_01_0028 - 215821-215880,216114-216284
Length = 76
Score = 51.6 bits (118), Expect = 7e-07
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = +2
Query: 287 DPAHYRGDLVRVPLLRDTYWEFHMDSV--NVNASRFCAQGCSAIADTGTSLIAGPSKEVE 460
DP H++GD V + R YW+F+ + + +++ F A+GC+AI D+ TSL+ P+ V
Sbjct: 2 DPKHFKGDHTYVHVSRKGYWQFNTRDLLTDGHSTGFYAKGCAAIVDSRTSLLTDPTAIVA 61
Query: 461 ALNAAVGATAI 493
+N A A I
Sbjct: 62 QVNHATEAEGI 72
>06_03_1205 -
28406183-28406218,28406462-28406548,28406769-28406830,
28407968-28408184,28408793-28408957,28409145-28409250,
28409830-28410071,28410493-28410605,28410848-28411043,
28411681-28411827,28412034-28412218,28412478-28412592,
28413237-28413728
Length = 720
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Frame = +2
Query: 530 PHLPRVTFTIAGKR--LHARRQRTTCSRVAQFRAHGVPVRLHGAGRAQTHGPR-XGSWG 697
PHLP +A + L ARR R HG HG G + HGP GS G
Sbjct: 41 PHLPSKPLNLAARSPLLLARRSLPFAPRAHGDHHHGHHHHHHGHGHSHHHGPEVHGSGG 99
>04_03_0444 - 16006619-16006733,16006754-16007048,16008265-16008967
Length = 370
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -1
Query: 180 TGVTWSTAIVLKAIPRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSS 31
T TWS+ + +P +P + + PGS RR++SP T TSS
Sbjct: 156 TTTTWSSTSDVAFLPPLPLQVVELRLLPGSRPVIDQ--RRSVSPTTSTSS 203
>10_08_0121 + 14977645-14977734,14978975-14979062,14979271-14979617
Length = 174
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 471 RRWAPRPSPSGSTSWTAASYRTCRESPLPSPGNDFTLEGNEL 596
RRW R ST + + C ++PLP G L N L
Sbjct: 71 RRWHRRHKQVSSTGYDGNKHPPCADAPLPPIGPSTLLPSNSL 112
>10_06_0011 - 9581916-9582167,9582523-9582574,9584105-9584331
Length = 176
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 70 DVRRGRVGARACLRGRQVRRDPRDGLQH 153
D G A CL G+++ R+P GL+H
Sbjct: 109 DAEHGMHSANGCLAGQRLLREPHHGLRH 136
>06_03_0169 -
17457929-17457988,17458086-17458192,17458383-17458499,
17458630-17458702
Length = 118
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 483 PRPSPSGSTSWTAASYRTCRESPLPSPGN 569
P P P S SW AA T +P+PS N
Sbjct: 61 PEPEPDASPSWLAARRPTPEGAPVPSGPN 89
>05_07_0198 -
28359092-28359457,28359574-28359729,28359844-28360011,
28360082-28360206,28360288-28360405,28360491-28360718,
28360959-28361099,28361433-28361498,28361770-28361862,
28361965-28362225
Length = 573
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = -1
Query: 501 PKAMAVAPTAALRASTSLEGPAISDVPVSAMAEQPWAQKRLALT 370
PK +A A AA +A T+ PA PVS A P A +R A+T
Sbjct: 12 PKTLAAAAAAAPKAPTA---PAAVSFPVSHAACAPLAARRRAVT 52
>03_04_0069 - 17022468-17023361
Length = 297
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = +1
Query: 58 GAAPDVRRGRVGARACLRGRQVRRDPRDGLQHYRSGPCDPGVRQHGGSXTR 210
G VRRGR GAR R R+V ++H + PC P R G R
Sbjct: 247 GGRRGVRRGRAGARGA-RVRRVGGRAARRVRHLGAPPCAPRRRLRRGGVRR 296
>02_05_0159 - 26368562-26369239,26371374-26371853
Length = 385
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -3
Query: 577 VKSFPGDGKGDSRQVRYEAAVHDVLPEGDGRGAHR 473
+ SF GDG GD+ V + A G G HR
Sbjct: 233 IDSFAGDGDGDAETVLFRAGTAAAAAADGGHGDHR 267
>12_02_0913 + 24246217-24247557
Length = 446
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 362 SVNVNASRFC--AQGCSAIADTGTSLIAGPSKEVEALNAAVGATAIAFG 502
+ N + FC A GCS IA G ++AG + EA G +AFG
Sbjct: 153 AANDDIIHFCDLAAGCSVIAGYGAGVVAG-TLGTEAFAFQSGTAELAFG 200
>12_01_0940 -
9303549-9303723,9303816-9303893,9304055-9304110,
9304687-9304760,9304888-9304892,9304934-9304971,
9308558-9308578,9308764-9308858,9309989-9310115
Length = 222
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGGLKVRRQTFA 79
+GS+ GF + D VTVG L V+ Q A
Sbjct: 52 TGSVDGFFNEDSVTVGDLVVKDQKIA 77
>11_02_0009 -
7315669-7315686,7316239-7316259,7316425-7316519,
7317445-7317502,7317701-7317792,7318101-7318227
Length = 136
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGGLKVRRQTFA 79
+GS+ GF + D VTVG L V+ Q A
Sbjct: 102 TGSVDGFFNEDSVTVGDLVVKDQKIA 127
>10_06_0030 - 9834515-9834608,9834784-9835277
Length = 195
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 563 GKRLHARRQRTTCSRVAQFRAHGVPVRLHGAGRAQTHGP 679
G+ R+ TT R Q H + R GAGR + H P
Sbjct: 39 GRVYERAREGTTGKRTHQLGGHSLSTRERGAGRKKGHWP 77
>06_03_0178 + 17594062-17595576
Length = 504
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 129 PSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERLPE 1
PS + +P S +ASA+ + T TSS R+PE L E
Sbjct: 18 PSTPRPSSPTPSSASASASASALAAAATTTTSSKRRRPEVLDE 60
>04_02_0002 +
8412568-8412781,8412915-8413015,8413114-8413185,
8413267-8413380,8414248-8414269,8414450-8414598,
8415054-8415203,8415369-8415401,8418268-8418474
Length = 353
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGGLKVRRQTFA 79
+GS++GF + D VT+G L V+ Q A
Sbjct: 252 NGSVAGFFNEDSVTIGDLVVKDQEIA 277
>05_04_0125 - 18241542-18242129
Length = 195
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -3
Query: 496 GDGRGAHRRVEGFHLLGGPGDQRRARVGDGRAAL--GTEAASVD 371
GDGRG RR G +GG G R + G+G A G SVD
Sbjct: 113 GDGRGGRRRRRG---VGGSGGSRGSGHGEGGGAQQPGRRQRSVD 153
>02_05_0880 +
32466538-32467083,32467333-32467644,32467731-32468201,
32468481-32469246,32469332-32469774
Length = 845
Score = 28.7 bits (61), Expect = 6.0
Identities = 29/61 (47%), Positives = 31/61 (50%)
Frame = -3
Query: 604 GAXSSLPSSVKSFPGDGKGDSRQVRYEAAVHDVLPEGDGRGAHRRVEGFHLLGGPGDQRR 425
GA SS S V F G G G R AV DV P G GRG RR G H GGPG +R
Sbjct: 77 GAGSSGGSPV--FHGAGAGH-RDATVFQAVADVSPPGRGRG--RR--GGH-GGGPGRGKR 128
Query: 424 A 422
+
Sbjct: 129 S 129
>01_06_0039 +
25857805-25858894,25858997-25859345,25860019-25860104,
25860242-25860399,25861489-25861565,25861656-25861722
Length = 608
Score = 28.7 bits (61), Expect = 6.0
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 4/71 (5%)
Frame = -3
Query: 583 SSVKSFPGDGKGDSRQVRYEAAVHDV----LPEGDGRGAHRRVEGFHLLGGPGDQRRARV 416
S + F G G G + V + +H V LP+ +G G G LGG G
Sbjct: 326 SGLPVFSGGGGGGALDVGAKE-IHMVIPADLPQNNGSGKEHEEYGAVALGGGGGGENFSF 384
Query: 415 GDGRAALGTEA 383
G G+ G EA
Sbjct: 385 GGGKTVDGAEA 395
>10_06_0145 + 11215895-11216860
Length = 321
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = -1
Query: 564 PAMVKVTRGRCGMRLQSTTYCPKAMAVAPTAALRASTSLEGPAISDVPVSAMAEQPWAQK 385
P +VK G C + STT A V+ T + + TS A + P + P +
Sbjct: 229 PRVVKTEPGCCSVSEASTTTTADAADVSSTGSSPSPTS-SNQAATATPPAPRPPPPLPET 287
Query: 384 RLALTLTESMWN 349
L TE+ W+
Sbjct: 288 IQQLDFTEAPWD 299
>08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187
Length = 817
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -3
Query: 136 EDPVELGGHEGKPGLR-HGLGERLAPHLEPAHGDIISGEEAGEAAG 2
EDP+ +GG EG G++ G A + HG +I +G G
Sbjct: 156 EDPLTIGGEEGDKGMKVKGEEGCRASGSDSGHGCVIGASGSGSGHG 201
>06_01_0754 - 5644310-5646292
Length = 660
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -3
Query: 478 HRRVEGFHLLGGPGDQRRARVGD-GRAALGTEAASVDIDRVHVELPVRVPE 329
HR V+ ++L G GD AR+GD G A L A+ RV L PE
Sbjct: 452 HRDVKANNVLLGAGDTGAARLGDFGLARLYEHGATPATTRVAGTLGYMAPE 502
>01_06_0457 -
29524544-29525962,29526518-29526606,29526841-29526892,
29527573-29527677,29528181-29528208,29528279-29528343,
29528808-29528880,29528932-29529113
Length = 670
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = -3
Query: 511 DVLPEGD-GRGAHRRVEGFHLLGGPGDQR 428
D+LPEG GRG R ++G++L+ D+R
Sbjct: 383 DILPEGHPGRGRSRVMKGWYLIYSSTDER 411
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,115,514
Number of Sequences: 37544
Number of extensions: 486643
Number of successful extensions: 2191
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2169
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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