Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2010
         (828 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical prote...    26   1.6  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    25   3.8  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   6.6  

>AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical protein
           protein.
          Length = 297

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 16/74 (21%), Positives = 31/74 (41%)
 Frame = -3

Query: 589 LPSSVKSFPGDGKGDSRQVRYEAAVHDVLPEGDGRGAHRRVEGFHLLGGPGDQRRARVGD 410
           L + + +   + K +S  +    ++ D++PE   RG H        +G    +R  R+ D
Sbjct: 83  LENQISNKNPNSKSESNNLSLSLSLVDMIPEEKLRGRHSSESDREGMGHDSHKRTHRLSD 142

Query: 409 GRAALGTEAASVDI 368
                 TE  + D+
Sbjct: 143 SDGG-STEGCNYDL 155


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -3

Query: 145 GHPEDPVELGGHE--GKPGLRHGLGERLAPH 59
           GHPE P+ +GG E   K  +R+ LG  +  H
Sbjct: 715 GHPEIPIRVGGLEIRSKQAIRY-LGVMIHDH 744


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 604 PGGTISGTRCACPASWRWTCPNP 672
           P G+ SG+RC+ P+    T P P
Sbjct: 770 PDGSGSGSRCSKPSVTSTTPPTP 792


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 758,877
Number of Sequences: 2352
Number of extensions: 15227
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 88150236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)