Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2010
(828 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical pr... 172 2e-43
AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl prot... 130 9e-31
Z82092-3|CAB05013.1| 638|Caenorhabditis elegans Hypothetical pr... 97 2e-20
U41746-3|AAO25990.1| 429|Caenorhabditis elegans Aspartyl protea... 97 2e-20
U41746-2|AAO25989.1| 635|Caenorhabditis elegans Aspartyl protea... 97 2e-20
AL021471-3|CAA16297.1| 638|Caenorhabditis elegans Hypothetical ... 97 2e-20
AF045640-8|AAC02571.1| 394|Caenorhabditis elegans Hypothetical ... 93 2e-19
AL132948-20|CAD31821.1| 391|Caenorhabditis elegans Hypothetical... 87 1e-17
AL132948-19|CAD31820.1| 395|Caenorhabditis elegans Hypothetical... 86 3e-17
AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic prot... 85 6e-17
AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical... 84 1e-16
AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic prot... 84 1e-16
AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic prot... 84 1e-16
Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical pr... 83 2e-16
U97000-5|AAC47991.1| 393|Caenorhabditis elegans Aspartyl protea... 75 8e-14
U97000-3|AAC47996.1| 389|Caenorhabditis elegans Aspartyl protea... 75 8e-14
AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical... 74 1e-13
U34889-1|AAB06576.1| 388|Caenorhabditis elegans aspartic protea... 73 2e-13
AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical ... 69 5e-12
U97000-4|AAC47994.1| 395|Caenorhabditis elegans Hypothetical pr... 64 1e-10
AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical ... 61 8e-10
U64851-4|AAC47989.1| 389|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AF026210-5|AAB71287.1| 632|Caenorhabditis elegans Hypothetical ... 30 2.3
AF026210-4|AAT81192.1| 627|Caenorhabditis elegans Hypothetical ... 30 2.3
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 28 7.1
AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear recep... 28 9.4
AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear recep... 28 9.4
AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear recep... 28 9.4
AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormo... 28 9.4
AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormo... 28 9.4
AF047652-2|AAC04393.3| 256|Caenorhabditis elegans Collagen prot... 28 9.4
AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen prot... 28 9.4
>Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical
protein R12H7.2 protein.
Length = 444
Score = 172 bits (419), Expect = 2e-43
Identities = 87/190 (45%), Positives = 115/190 (60%), Gaps = 1/190 (0%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPV 181
+GS+ GF+S D V V G+ Q FAEA SEPG+ FVAAKFDGILGMA+ IAV V PV
Sbjct: 159 TGSMKGFISKDSVCVAGVCAEDQPFAEATSEPGITFVAAKFDGILGMAYPEIAVLGVQPV 218
Query: 182 FDNMVAXGLVQP-VFSFYLNRDPGATTXXXXXXXXSDPAHYRGDLVRVPLLRDTYWEFHM 358
F+ + V +FSF+LNR+P + D Y + VP+ R YW+F M
Sbjct: 219 FNTLFEQKKVPSNLFSFWLNRNPDSEIGGEITFGGIDSRRYVEPITYVPVTRKGYWQFKM 278
Query: 359 DSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAIAFGQYVVDCSLIPHL 538
D V + C+ GC AIADTGTSLIAGP ++EA+ +GA + G+Y++ C +P L
Sbjct: 279 DKVVGSGVLGCSNGCQAIADTGTSLIAGPKAQIEAIQNFIGAEPLIKGEYMISCDKVPTL 338
Query: 539 PRVTFTIAGK 568
P V+F I G+
Sbjct: 339 PPVSFVIGGQ 348
Score = 34.7 bits (76), Expect = 0.082
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 564 GNDFTLEGNELXAPGWHNFGHTVCLSGFMALDVPKPMG 677
G +F+L+G + G T+CLSGFM +D+P+ +G
Sbjct: 347 GQEFSLKGEDYVLKVSQG-GKTICLSGFMGIDLPERVG 383
>AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl
protease protein 3 protein.
Length = 398
Score = 130 bits (315), Expect = 9e-31
Identities = 68/196 (34%), Positives = 108/196 (55%), Gaps = 7/196 (3%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGGLKV----RRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDH 169
+GS+ G + D V G + Q A A SEPG+ FVAAKFDGI GM + TI+V+
Sbjct: 134 TGSMKGTVDNDVVCFGHDTTYCTDKNQGLACATSEPGITFVAAKFDGIFGMGWDTISVNK 193
Query: 170 VTPVFDNMVAXGLV--QPVFSFYLNRDPG-ATTXXXXXXXXSDPAHYRGDLVRVPLLRDT 340
++ D + A + +F+F+L+RD T +DP HY G++ PL+ +
Sbjct: 194 ISQPMDQIFANSAICKNQLFAFWLSRDANDITNGGEITLCETDPNHYVGNIAWEPLVSED 253
Query: 341 YWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAIAFGQYVVDC 520
YW + SV ++ + + + +I DTGTSL+ GP+ ++ + +G + G+Y V+C
Sbjct: 254 YWRIKLASVVIDGTTYTSGPIDSIVDTGTSLLTGPTDVIKKIQHKIGGIPLFNGEYEVEC 313
Query: 521 SLIPHLPRVTFTIAGK 568
S IP LP +TF + G+
Sbjct: 314 SKIPSLPNITFNLGGQ 329
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 564 GNDFTLEGNELXAPGWHNFGHTVCLSGFMALDVPKPMGP 680
G +F L+G + + G + CLSGFM +D+P P GP
Sbjct: 328 GQNFDLQGKDYILQMSNGNGGSTCLSGFMGMDIPAPAGP 366
>Z82092-3|CAB05013.1| 638|Caenorhabditis elegans Hypothetical
protein ZK384.3 protein.
Length = 638
Score = 96.7 bits (230), Expect = 2e-20
Identities = 62/195 (31%), Positives = 92/195 (47%), Gaps = 5/195 (2%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPV 181
SG SG+L TD V +GGLK+++Q F A + F DGI G+A+ ++VD VTP
Sbjct: 131 SGECSGYLGTDTVEIGGLKIQKQEFGVA-NIVDYDFGTRPIDGIFGLAWPALSVDQVTPP 189
Query: 182 FDNMVAXG-LVQPVFS-FYLNRDPG--ATTXXXXXXXXSDPAHYRGDLVRVPLLRDTYWE 349
N+V+ L P+F+ F+ RDP + D + ++ VP+ TYW+
Sbjct: 190 MQNLVSQNQLDAPIFTIFFDKRDPDYYYPSNGLITYGGLDTKNCNANISYVPVSSKTYWQ 249
Query: 350 FHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAIAFGQ-YVVDCSL 526
F +D V AI DTG+S P + + AT + Y V CS
Sbjct: 250 FKVDGFQVGTYNRTVNRDQAIMDTGSSWFGLPYSVIAGIATQTNATWDLYASVYTVPCST 309
Query: 527 IPHLPRVTFTIAGKR 571
+ LP + FTI ++
Sbjct: 310 MNSLPDLVFTIGAEK 324
Score = 48.4 bits (110), Expect = 6e-06
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 4/119 (3%)
Frame = +2
Query: 5 GSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPVF 184
G +G+L TD V +GGL + +Q A + GL F + GI +A+ ++VD VTP
Sbjct: 521 GLCTGYLGTDTVQMGGLTITKQELGIA-TIVGLGFGLKPYVGIFELAWPALSVDQVTPPM 579
Query: 185 DNMVAXG-LVQPVFSFYLN-RDPGATTXXXXXXXXS--DPAHYRGDLVRVPLLRDTYWE 349
+++ L P+F+ +L+ +D G D + ++ V L T+W+
Sbjct: 580 QKLISQNQLDAPMFTIWLDQKDQGVYVGYTGLITYGGFDNKNCDANVTYVALSSKTFWQ 638
>U41746-3|AAO25990.1| 429|Caenorhabditis elegans Aspartyl protease
protein 2, isoformb protein.
Length = 429
Score = 96.7 bits (230), Expect = 2e-20
Identities = 66/183 (36%), Positives = 90/183 (49%), Gaps = 9/183 (4%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVD 166
+GS GFL D +T GG L V F +A S F DGILG+AF +IAVD
Sbjct: 170 TGSARGFLGQDTITFGGIGEPQLAVPNTVFGQATSLAAF-FEGQPLDGILGLAFKSIAVD 228
Query: 167 HVTPVFDNMVAXGLVQ-PVFSFYLNR--DPGATTXXXXXXXXSDPAHYRGDLVRVPLLRD 337
+TP F N + LV P+F+ +L D D + + PL
Sbjct: 229 QITPPFINAINQNLVDLPLFTVFLEHEGDQNGVQGGVYTYGGIDTKNCGPVIAYQPLSSA 288
Query: 338 TYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGAT-AIAFGQYVV 514
TY++F M ++ + S ++G I+DTGTSLI GP V A+ AVGAT +G Y++
Sbjct: 289 TYYQFKMSAIG-SGSYHSSKGWQVISDTGTSLIGGPKAYVSAIADAVGATWRDDYGVYIL 347
Query: 515 DCS 523
CS
Sbjct: 348 PCS 350
>U41746-2|AAO25989.1| 635|Caenorhabditis elegans Aspartyl protease
protein 2, isoforma protein.
Length = 635
Score = 96.7 bits (230), Expect = 2e-20
Identities = 66/183 (36%), Positives = 90/183 (49%), Gaps = 9/183 (4%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVD 166
+GS GFL D +T GG L V F +A S F DGILG+AF +IAVD
Sbjct: 376 TGSARGFLGQDTITFGGIGEPQLAVPNTVFGQATSLAAF-FEGQPLDGILGLAFKSIAVD 434
Query: 167 HVTPVFDNMVAXGLVQ-PVFSFYLNR--DPGATTXXXXXXXXSDPAHYRGDLVRVPLLRD 337
+TP F N + LV P+F+ +L D D + + PL
Sbjct: 435 QITPPFINAINQNLVDLPLFTVFLEHEGDQNGVQGGVYTYGGIDTKNCGPVIAYQPLSSA 494
Query: 338 TYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGAT-AIAFGQYVV 514
TY++F M ++ + S ++G I+DTGTSLI GP V A+ AVGAT +G Y++
Sbjct: 495 TYYQFKMSAIG-SGSYHSSKGWQVISDTGTSLIGGPKAYVSAIADAVGATWRDDYGVYIL 553
Query: 515 DCS 523
CS
Sbjct: 554 PCS 556
Score = 65.3 bits (152), Expect = 5e-11
Identities = 49/164 (29%), Positives = 71/164 (43%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPV 181
S S SG L D V+ GG+ + + V A DGI+G+ F + ++ P
Sbjct: 43 SDSASGILGFDTVSFGGISESQLIVPDTV-----VATAEDIDGIMGLGFLANSQQNIYPP 97
Query: 182 FDNMVAXGLVQPVFSFYLNRDPGATTXXXXXXXXSDPAHYRGDLVRVPLLRDTYWEFHMD 361
F N V LV P+F YL P D + PL ++F+M
Sbjct: 98 FVNAVGQKLVDPIFHVYLGNRPNRA--GQITFGGQDTQNCAKVKQYHPLTTGAAYQFYMT 155
Query: 362 SVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAI 493
SV+ A G +A++DT +S+I GP V + A GAT+I
Sbjct: 156 SVSSGAYS-ARNGWTALSDTASSIIYGPKAIVAGIADAAGATSI 198
>AL021471-3|CAA16297.1| 638|Caenorhabditis elegans Hypothetical
protein ZK384.3 protein.
Length = 638
Score = 96.7 bits (230), Expect = 2e-20
Identities = 62/195 (31%), Positives = 92/195 (47%), Gaps = 5/195 (2%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPV 181
SG SG+L TD V +GGLK+++Q F A + F DGI G+A+ ++VD VTP
Sbjct: 131 SGECSGYLGTDTVEIGGLKIQKQEFGVA-NIVDYDFGTRPIDGIFGLAWPALSVDQVTPP 189
Query: 182 FDNMVAXG-LVQPVFS-FYLNRDPG--ATTXXXXXXXXSDPAHYRGDLVRVPLLRDTYWE 349
N+V+ L P+F+ F+ RDP + D + ++ VP+ TYW+
Sbjct: 190 MQNLVSQNQLDAPIFTIFFDKRDPDYYYPSNGLITYGGLDTKNCNANISYVPVSSKTYWQ 249
Query: 350 FHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAIAFGQ-YVVDCSL 526
F +D V AI DTG+S P + + AT + Y V CS
Sbjct: 250 FKVDGFQVGTYNRTVNRDQAIMDTGSSWFGLPYSVIAGIATQTNATWDLYASVYTVPCST 309
Query: 527 IPHLPRVTFTIAGKR 571
+ LP + FTI ++
Sbjct: 310 MNSLPDLVFTIGAEK 324
Score = 48.4 bits (110), Expect = 6e-06
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 4/119 (3%)
Frame = +2
Query: 5 GSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPVF 184
G +G+L TD V +GGL + +Q A + GL F + GI +A+ ++VD VTP
Sbjct: 521 GLCTGYLGTDTVQMGGLTITKQELGIA-TIVGLGFGLKPYVGIFELAWPALSVDQVTPPM 579
Query: 185 DNMVAXG-LVQPVFSFYLN-RDPGATTXXXXXXXXS--DPAHYRGDLVRVPLLRDTYWE 349
+++ L P+F+ +L+ +D G D + ++ V L T+W+
Sbjct: 580 QKLISQNQLDAPMFTIWLDQKDQGVYVGYTGLITYGGFDNKNCDANVTYVALSSKTFWQ 638
>AF045640-8|AAC02571.1| 394|Caenorhabditis elegans Hypothetical
protein C11D2.2 protein.
Length = 394
Score = 93.1 bits (221), Expect = 2e-19
Identities = 59/185 (31%), Positives = 88/185 (47%), Gaps = 6/185 (3%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGG--LKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVT 175
+GS SG+ D + L ++ Q F +A + F + DGILG+ F+ +AV V
Sbjct: 138 TGSASGYFGKDTLCFSDTTLCIKSQIFGQA-NNIAPFFANQEIDGILGLGFTDLAVHSVP 196
Query: 176 PVFDNMVAXGLV-QPVFSFYLNRD--PGATTXXXXXXXXSDPAHYRGDLVRVPLLRDTYW 346
P F N V GLV +P+F+ YL + DP H + +PL + YW
Sbjct: 197 PPFVNAVEQGLVDEPIFTVYLEHHGIKKEASGGYFTYGGEDPDHCGEIITWIPLTKAAYW 256
Query: 347 EFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAIAFG-QYVVDCS 523
+F M + ++ G I+DTGTS I GP K ++ + GAT + YV+ CS
Sbjct: 257 QFRMQGIGIDNVNEHKNGWEVISDTGTSFIGGPGKVIQDIANKYGATYDEYSDSYVIPCS 316
Query: 524 LIPHL 538
I +L
Sbjct: 317 EIKNL 321
>AL132948-20|CAD31821.1| 391|Caenorhabditis elegans Hypothetical
protein Y39B6A.24 protein.
Length = 391
Score = 87.4 bits (207), Expect = 1e-17
Identities = 63/193 (32%), Positives = 94/193 (48%), Gaps = 6/193 (3%)
Frame = +2
Query: 5 GSLSGFLSTDDVTVGG-LKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPV 181
G SG+L TD V +GG L +R+Q A ++ + F DGI G+A+ +AVD +TP
Sbjct: 136 GLCSGYLGTDTVGLGGGLTIRKQELGIA-NKLDVDFAVQPMDGIFGLAWPALAVDQITPP 194
Query: 182 FDNMVAXGLVQPVFSFYLNRDPGAT---TXXXXXXXXSDPAHYRGDLVRVPLLRDTYWEF 352
N+++ L PVFS +L+R A+ + D + + VPL TYW+F
Sbjct: 195 MQNLISQ-LDVPVFSVWLDRKIQASHGGSAGMITYGGIDTKNCDAGVTYVPLTAKTYWQF 253
Query: 353 HMDSVNVNASRFCAQGCS-AIADTGTSLIAGPSKEVEALNAAVGATAIAFGQ-YVVDCSL 526
MD V + G + I+DTG+S I+ P + + AT + Y V CS
Sbjct: 254 KMDGFAVGT--YSQYGYNQVISDTGSSWISAPYAMINDIATQTHATWDEMNEIYTVKCST 311
Query: 527 IPHLPRVTFTIAG 565
+ P + FTI G
Sbjct: 312 MKTQPDLVFTIGG 324
>AL132948-19|CAD31820.1| 395|Caenorhabditis elegans Hypothetical
protein Y39B6A.23 protein.
Length = 395
Score = 86.2 bits (204), Expect = 3e-17
Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 5/193 (2%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPV 181
SG+ SG+L TD + +GGL V+ Q F A + G + DGI G+ + I+VD VTP
Sbjct: 138 SGTSSGYLGTDVLQLGGLTVKAQEFGVA-TNLGSVLGSEPMDGIFGLGWPAISVDQVTPP 196
Query: 182 FDNMVA-XGLVQPVFSFYLNRDPGAT---TXXXXXXXXSDPAHYRGDLVRVPLLRDTYWE 349
N+++ L P+FS +++R + T D + + V L TYW+
Sbjct: 197 MQNLISQKQLDAPLFSIWVDRKLQVSQGGTGGLITYGAVDTKNCDAQVNYVALSSKTYWQ 256
Query: 350 FHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGAT-AIAFGQYVVDCSL 526
F MD V + Q AI+DTG++ + P+ + A+ AT + Y +DCS
Sbjct: 257 FPMDGVAIGNYAMMKQE-QAISDTGSAWLGLPNPVLNAIVQQTKATYDWNYEIYTLDCST 315
Query: 527 IPHLPRVTFTIAG 565
+ P + FTI G
Sbjct: 316 MQTQPDLVFTIGG 328
>AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic
protease protein.
Length = 395
Score = 85.0 bits (201), Expect = 6e-17
Identities = 61/193 (31%), Positives = 91/193 (47%), Gaps = 5/193 (2%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPV 181
SGS +G+L D + GGL V+ Q F + + F DGILG+ ++ +AVD V P
Sbjct: 137 SGSCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGYQPVDGILGLGWTALAVDQVVPP 195
Query: 182 FDNMVA-XGLVQPVFSFYLNRD---PGATTXXXXXXXXSDPAHYRGDLVRVPLLRDTYWE 349
N++A L P+F+ +L+R+ T D + + VPL TYW+
Sbjct: 196 MQNLIAQKQLDAPLFTVWLDRNLQIAQGTPGGLITYGAIDTVNCAKQVTYVPLSAKTYWQ 255
Query: 350 FHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGAT-AIAFGQYVVDCSL 526
F +D+ V + I+DTGTS + P+ V A+ A + Y VDCS
Sbjct: 256 FPLDAFAVGTYSETKKD-QVISDTGTSWLGAPNTIVSAIVKQTKAVFDWSTELYTVDCST 314
Query: 527 IPHLPRVTFTIAG 565
+ P + FTI G
Sbjct: 315 MKTQPDLIFTIGG 327
>AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical
protein Y39B6A.20 protein.
Length = 396
Score = 84.2 bits (199), Expect = 1e-16
Identities = 61/193 (31%), Positives = 90/193 (46%), Gaps = 5/193 (2%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPV 181
SGS +G+L D + GGL V+ Q F + + F DGILG+ + +AVD V P
Sbjct: 138 SGSCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGYQPVDGILGLGWPALAVDQVVPP 196
Query: 182 FDNMVA-XGLVQPVFSFYLNRD---PGATTXXXXXXXXSDPAHYRGDLVRVPLLRDTYWE 349
N++A L P+F+ +L+R+ T D + + VPL TYW+
Sbjct: 197 MQNLIAQKQLDAPLFTVWLDRNLQIAQGTPGGLITYGAIDTVNCAKQVTYVPLSAKTYWQ 256
Query: 350 FHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGAT-AIAFGQYVVDCSL 526
F +D+ V + I+DTGTS + P+ V A+ A + Y VDCS
Sbjct: 257 FPLDAFAVGTYSETKKD-QVISDTGTSWLGAPNTIVSAIVKQTKAVFDWSTELYTVDCST 315
Query: 527 IPHLPRVTFTIAG 565
+ P + FTI G
Sbjct: 316 MKTQPDLIFTIGG 328
>AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 84.2 bits (199), Expect = 1e-16
Identities = 61/193 (31%), Positives = 90/193 (46%), Gaps = 5/193 (2%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPV 181
SGS +G+L D + GGL V+ Q F + + F DGILG+ + +AVD V P
Sbjct: 138 SGSCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGYQPVDGILGLGWPALAVDQVVPP 196
Query: 182 FDNMVA-XGLVQPVFSFYLNRD---PGATTXXXXXXXXSDPAHYRGDLVRVPLLRDTYWE 349
N++A L P+F+ +L+R+ T D + + VPL TYW+
Sbjct: 197 MQNLIAQKQLDAPLFTVWLDRNLQIAQGTPGGLITYGAIDTVNCAKQVTYVPLSAKTYWQ 256
Query: 350 FHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGAT-AIAFGQYVVDCSL 526
F +D+ V + I+DTGTS + P+ V A+ A + Y VDCS
Sbjct: 257 FPLDAFAVGTYSETKKD-QVISDTGTSWLGAPNTIVSAIVKQTKAVFDWSTELYTVDCST 315
Query: 527 IPHLPRVTFTIAG 565
+ P + FTI G
Sbjct: 316 MKTQPDLIFTIGG 328
>AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 84.2 bits (199), Expect = 1e-16
Identities = 61/193 (31%), Positives = 90/193 (46%), Gaps = 5/193 (2%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPV 181
SGS +G+L D + GGL V+ Q F + + F DGILG+ + +AVD V P
Sbjct: 138 SGSCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGYQPVDGILGLGWPALAVDQVVPP 196
Query: 182 FDNMVA-XGLVQPVFSFYLNRD---PGATTXXXXXXXXSDPAHYRGDLVRVPLLRDTYWE 349
N++A L P+F+ +L+R+ T D + + VPL TYW+
Sbjct: 197 MQNLIAQKQLDAPLFTVWLDRNLQIAQGTPGGLITYGAIDTVNCAKQVTYVPLSAKTYWQ 256
Query: 350 FHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGAT-AIAFGQYVVDCSL 526
F +D+ V + I+DTGTS + P+ V A+ A + Y VDCS
Sbjct: 257 FPLDAFAVGTYSETKKD-QVISDTGTSWLGAPNTIVSAIVKQTKAVFDWSTELYTVDCST 315
Query: 527 IPHLPRVTFTIAG 565
+ P + FTI G
Sbjct: 316 MKTQPDLIFTIGG 328
>Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical
protein C15C8.3 protein.
Length = 428
Score = 83.0 bits (196), Expect = 2e-16
Identities = 63/196 (32%), Positives = 90/196 (45%), Gaps = 7/196 (3%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGGLKV--RRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVT 175
+G + GF D V Q F +A + G AF DGI+G+ + +AV+ T
Sbjct: 175 TGEVKGFFGVDTFCFTNTSVCATGQVFGQATTI-GEAFAKQPEDGIIGLGWPALAVNQQT 233
Query: 176 PVFDNMVAXG-LVQPVFSFYL-NRDPGATTXXXXXXXXS-DPAHYRGDLVRVPLLRDTYW 346
P N++ G L QP F YL N P + D H ++ VPL T+W
Sbjct: 234 PPLFNLMNQGKLDQPYFVVYLANIGPTSQINGGAFTVGGLDTTHCSSNVDWVPLSTQTFW 293
Query: 347 EFHMDSVNVNA-SRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAIAF-GQYVVDC 520
+F + V+ + S+ G A ADT S I P V +L AVGAT + G + +DC
Sbjct: 294 QFKLGGVSSGSYSQAPNSGWQAAADTAASFIGAPKSVVTSLAKAVGATYVPLTGAFFMDC 353
Query: 521 SLIPHLPRVTFTIAGK 568
+ +P + FTI GK
Sbjct: 354 DAV--VPDIVFTINGK 367
>U97000-5|AAC47991.1| 393|Caenorhabditis elegans Aspartyl protease
protein 5 protein.
Length = 393
Score = 74.5 bits (175), Expect = 8e-14
Identities = 63/198 (31%), Positives = 92/198 (46%), Gaps = 9/198 (4%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVD 166
SG+ G+L D V G L V TF A + F +GILG+AF+++AVD
Sbjct: 135 SGNAKGYLGEDTVAFGAVTEKQLPVPSTTFGIA-THISSDFKNDAAEGILGLAFTSLAVD 193
Query: 167 HVTPVFDNMVAXGLV-QPVFSFYLNRDPGATTXXXXXXXXS--DPAHYRGDLVRVPLLRD 337
HV P N + GL+ QP+F+ +L A D + + PL
Sbjct: 194 HVVPPLINAINQGLLDQPLFTVWLEHKGSANDVGGGVFTYGAVDTTNCGPVIAYQPLSSA 253
Query: 338 TYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAIA-FGQYVV 514
TY++F DS + S ++ I+DTGTS + GP V L +A+GAT + Y V
Sbjct: 254 TYYQFVADSFKL-GSYSNSKKYQVISDTGTSFLGGPKAVVAGLASALGATYHSNDDSYYV 312
Query: 515 DCSLIPHLPRVTFTIAGK 568
C+ ++ + TI GK
Sbjct: 313 PCA--TNIGTLDITIGGK 328
>U97000-3|AAC47996.1| 389|Caenorhabditis elegans Aspartyl protease
protein 6 protein.
Length = 389
Score = 74.5 bits (175), Expect = 8e-14
Identities = 60/186 (32%), Positives = 83/186 (44%), Gaps = 9/186 (4%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVD 166
SG +G L D V G L V TF A S+ F DGILG+AF+++AVD
Sbjct: 133 SGDAAGILGQDTVRFGAKGDSQLSVPTTTFGIA-SKISADFKNDATDGILGLAFTSLAVD 191
Query: 167 HVTPVFDNMVAXGLV-QPVFSFYLNRDPGATTXXXXXXXXS--DPAHYRGDLVRVPLLRD 337
V P N + G++ QP+FS +L A D + + PL
Sbjct: 192 GVVPPLINAINQGILDQPLFSVWLEHRGAANNVGGGVFTYGAIDTTNCGALVAYQPLSSA 251
Query: 338 TYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAIAFGQ-YVV 514
TY++F + S + I+DTGTS + GP V+ L A GAT F + Y +
Sbjct: 252 TYYQFKAAGFKL-GSYSNTKTVDVISDTGTSFLGGPQSVVDGLAKAAGATYDDFNEVYFI 310
Query: 515 DCSLIP 532
DC+ P
Sbjct: 311 DCAAQP 316
>AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical
protein Y39B6A.22 protein.
Length = 390
Score = 73.7 bits (173), Expect = 1e-13
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 7/195 (3%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPV 181
+G+ SG+L TD + +GGL V+ Q FA ++ DG+LG+A+ +AVD +TP
Sbjct: 135 TGACSGYLGTDVLQLGGLTVKNQEFA-VTTQISDQMGHFPLDGVLGLAWPPVAVDQITPP 193
Query: 182 FDNMVAXGLVQPVFSFYLNR---DPGATTXXXXXXXXSDPAHYRGDLVRVPLLRDTYWEF 352
N++ L P+F+ +L+R + D + + V L T+W+F
Sbjct: 194 MQNLMPQ-LDAPIFTLWLDRVLQGSQGGSGGLITFGAIDTKNCDAQVNYVALSSKTFWQF 252
Query: 353 HMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAIAFGQ----YVVDC 520
+D V + S + AI+D+G + P + LNA + T + Y +DC
Sbjct: 253 PLDGVAI-GSYTSMKKDQAISDSGDFGLRLP---LAVLNAVIQQTKATYDWTNEFYTLDC 308
Query: 521 SLIPHLPRVTFTIAG 565
S + P + FTI G
Sbjct: 309 STMQTQPDLVFTIGG 323
>U34889-1|AAB06576.1| 388|Caenorhabditis elegans aspartic protease
protein.
Length = 388
Score = 73.3 bits (172), Expect = 2e-13
Identities = 63/198 (31%), Positives = 90/198 (45%), Gaps = 9/198 (4%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVD 166
SG+ G+L D V G L V TF A + F GILG+AF+++AVD
Sbjct: 130 SGNAKGYLGEDTVAFGAVTEKQLPVPSTTFGIA-THISSDFKNDAAGGILGLAFTSLAVD 188
Query: 167 HVTPVFDNMVAXGLV-QPVFSFYLNRDPGATTXXXXXXXXS--DPAHYRGDLVRVPLLRD 337
HV P N + GL+ QP+F+ +L A D + + PL
Sbjct: 189 HVVPPLINAINQGLLDQPLFTVWLEHKGSANDVGGGVFTYGAVDTTNCGPVIAYQPLSSA 248
Query: 338 TYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAIA-FGQYVV 514
TY++F DS S ++ I+DTGTS + GP V L +A+GAT + Y V
Sbjct: 249 TYYQFVADSFK-RGSYSYSKKYQVISDTGTSFLGGPKAVVAGLASALGATYHSNDDSYYV 307
Query: 515 DCSLIPHLPRVTFTIAGK 568
C+ ++ + TI GK
Sbjct: 308 PCA--TNIGTLDITIGGK 323
>AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical
protein F59D6.2 protein.
Length = 380
Score = 68.5 bits (160), Expect = 5e-12
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 4/197 (2%)
Frame = +2
Query: 5 GSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPVF 184
G +SG L D++ G K++ Q F L+ V FDG+LG+ + A++ +
Sbjct: 128 GDVSGDLGKDNIQFAGSKIQNQDFGIGTDATRLSGVT--FDGVLGLGWPATALNGTSTTM 185
Query: 185 DNMVAXGLVQPVFSFYLNRDP--GATTXXXXXXXXSDPAHYRGDLVRVPLLRDTYWEFHM 358
N++ L QP+F+ Y + T D H + + V L D+ W + +
Sbjct: 186 QNLLPQ-LDQPLFTTYFTKSSVHNGTVGGEITFGAIDTTHCQSQINYVRLAYDSLWSYSI 244
Query: 359 DSVNV-NASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAIAFGQ-YVVDCSLIP 532
D + N SR Q +AI DT +S P+ + + A GA Q Y + CS
Sbjct: 245 DGFSFGNYSR--NQTDTAIPDTTSSYTGVPNLVLAEIVIATGAQYDWNHQAYTLPCSSTA 302
Query: 533 HLPRVTFTIAGKRLHAR 583
LP + FTI G + R
Sbjct: 303 TLPDLVFTIGGNSYNVR 319
>U97000-4|AAC47994.1| 395|Caenorhabditis elegans Hypothetical
protein F21F8.4 protein.
Length = 395
Score = 64.1 bits (149), Expect = 1e-10
Identities = 54/169 (31%), Positives = 76/169 (44%), Gaps = 8/169 (4%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVD 166
SGS G + D V GG L V TF A S F +GILG+AF+++AVD
Sbjct: 135 SGSAKGIMGVDTVAFGGASEQQLLVPSTTFGIA-SHISSNFKNDAAEGILGLAFTSLAVD 193
Query: 167 HVTPVFDNMVAXGLV-QPVFSFYLNRDPGATTXXXXXXXXS--DPAHYRGDLVRVPLLRD 337
VTP N + ++ QP+F+ +L A D + + PL
Sbjct: 194 GVTPPLINAINKKILDQPLFTVFLEHKGTAKNVGGGVFTYGAVDTTNCGPVIAYQPLSSA 253
Query: 338 TYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGA 484
TY++F D + S + I+DTG+SLI GPS + A+GA
Sbjct: 254 TYYQFVADGFKL-GSYSNNKKSQVISDTGSSLIGGPSAVINGFAQALGA 301
>AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical
protein F59D6.3 protein.
Length = 474
Score = 61.3 bits (142), Expect = 8e-10
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 4/197 (2%)
Frame = +2
Query: 5 GSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVDHVTPVF 184
G +SG + D G ++ Q F + FDG+LG+ + A++ +
Sbjct: 222 GHVSGNVGKDTAQFAGFTIQSQDFG--IGTAATRLFGETFDGVLGLGWPATALNGTSTTM 279
Query: 185 DNMVAXGLVQPVFSFYLNRDP--GATTXXXXXXXXSDPAHYRGDLVRVPLLRDTYWEFHM 358
N++ L Q +F+ Y + T D H + + VPL +++W + +
Sbjct: 280 QNLLPQ-LDQKLFTTYFTKSNMHNGTAGGDIMFGAIDTTHCQSQVNYVPLAYNSFWSYSV 338
Query: 359 DSVNVNA-SRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAIAFGQ-YVVDCSLIP 532
D ++ SR Q + I DT + P+ + + A GAT Q Y + CS
Sbjct: 339 DGFSIGTYSR--TQTETTIPDTSSGWTGVPNVVLAGIVKATGATYDWNHQAYTLPCSSTA 396
Query: 533 HLPRVTFTIAGKRLHAR 583
LP + FTI G + R
Sbjct: 397 TLPDMVFTIGGNSYNVR 413
>U64851-4|AAC47989.1| 389|Caenorhabditis elegans Hypothetical
protein F28A12.4 protein.
Length = 389
Score = 60.1 bits (139), Expect = 2e-09
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 8/170 (4%)
Frame = +2
Query: 2 SGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEPGLAFVAAKFDGILGMAFSTIAVD 166
SG G L D V +GG L + R ++ G F + +GI G+AF+ +AVD
Sbjct: 134 SGDAYGTLGIDTVKIGGSGEAQLAIPR-SYLGVADTVGSDFKWSPKEGIFGLAFTALAVD 192
Query: 167 HVTPVFDNMVAXGLV-QPVFSFYLNR--DPGATTXXXXXXXXSDPAHYRGDLVRVPLLRD 337
++TP N + GL+ QP+F+ + + PG + D H + L
Sbjct: 193 NITPPIINAINQGLLDQPLFTTWFGQRGAPGTSASGAFTYGGLDKNHCGPVIGYAELTNA 252
Query: 338 TYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGAT 487
+++F ++ S I DT TS + GP ++ L A GAT
Sbjct: 253 RHFQFQATGFSL-GSYVSTTTYEVITDTATSFLCGPQAAIDNLAKAAGAT 301
>AF026210-5|AAB71287.1| 632|Caenorhabditis elegans Hypothetical
protein F48A11.5a protein.
Length = 632
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 483 PRPSPSGSTSWTAASYRTCRESPLPSPGND 572
P PS SGS+S + +S R R +P+P P +
Sbjct: 155 PTPSSSGSSSASFSSRRGTRANPVPPPNQE 184
>AF026210-4|AAT81192.1| 627|Caenorhabditis elegans Hypothetical
protein F48A11.5b protein.
Length = 627
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 483 PRPSPSGSTSWTAASYRTCRESPLPSPGND 572
P PS SGS+S + +S R R +P+P P +
Sbjct: 150 PTPSSSGSSSASFSSRRGTRANPVPPPNQE 179
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +3
Query: 480 APRPSPSGSTSWTAASYRTCRESPLPSPGNDFTLEGNELXAPG 608
APRP P G A + R PGND G + APG
Sbjct: 182 APRPGPPGPKGPRGAPGNSGRAGAPGQPGNDAHGYGGGVGAPG 224
>AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 618
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 138 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 7
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 2 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 43
>AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 624
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 138 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 7
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 4 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 45
>AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 619
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 138 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 7
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 1 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 42
>AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform d protein.
Length = 659
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 138 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 7
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 39 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 80
>AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform c protein.
Length = 733
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 138 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 7
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 113 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 154
>AF047652-2|AAC04393.3| 256|Caenorhabditis elegans Collagen protein
107, isoform a protein.
Length = 256
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = -3
Query: 175 GHMVHCDSAE---GHPEDPVELGGHEGKPGLRHGLGERLAPHLEPAHGDIISGEEAGEA 8
G + C + E P+ P G +G+PG G+ AP GD + + GEA
Sbjct: 129 GGCIKCPAGEPGPAGPDGPAGAPGADGQPGAPGNAGQDGAPGAAGEQGDAGAAGQDGEA 187
>AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen protein
107, isoform b protein.
Length = 294
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = -3
Query: 175 GHMVHCDSAE---GHPEDPVELGGHEGKPGLRHGLGERLAPHLEPAHGDIISGEEAGEA 8
G + C + E P+ P G +G+PG G+ AP GD + + GEA
Sbjct: 129 GGCIKCPAGEPGPAGPDGPAGAPGADGQPGAPGNAGQDGAPGAAGEQGDAGAAGQDGEA 187
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,604,106
Number of Sequences: 27780
Number of extensions: 343329
Number of successful extensions: 1114
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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