Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2009
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    23   2.6  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    23   2.6  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    23   2.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.0  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   8.0  

>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = +1

Query: 214 KVIGKALVGVPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGL 369
           KV   ALV V    Y++GSK          M  F  +   AG ++   L G+
Sbjct: 45  KVKPSALVSVKCKPYHVGSKFLLIGDAAHAMVPFYGQGMNAGFEDCFLLDGI 96


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = +1

Query: 214 KVIGKALVGVPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGL 369
           KV   ALV V    Y++GSK          M  F  +   AG ++   L G+
Sbjct: 278 KVKPSALVSVKCKPYHVGSKFLLIGDAAHAMVPFYGQGMNAGFEDCFLLDGI 329


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = +1

Query: 214 KVIGKALVGVPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGL 369
           KV   ALV V    Y++GSK          M  F  +   AG ++   L G+
Sbjct: 278 KVKPSALVSVKCKPYHVGSKFLLIGDAAHAMVPFYGQGMNAGFEDCFLLDGI 329


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 588  FDNRLQNYISFFKSXGVGVINA 653
            FDN+    ++ +KS G+ V+ A
Sbjct: 1878 FDNKFYEKVTAYKSKGIKVLVA 1899


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 540 RKSRYQPYSLISKSTLFDNRLQNYI 614
           ++ RY+ Y L   S L DN + +YI
Sbjct: 142 KQLRYEHYRLYQLSVLIDNNM-SYI 165


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,782
Number of Sequences: 336
Number of extensions: 3422
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)