Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2009
(750 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0351 - 17829874-17830005,17830250-17830267,17830544-178306... 136 2e-32
10_08_0021 + 14217455-14217505,14217742-14217909,14219137-142193... 81 7e-16
04_03_0438 + 15929220-15929453,15929564-15929764,15930874-159310... 75 8e-14
01_05_0718 - 24575946-24576121,24576721-24576874,24576964-245770... 74 1e-13
03_05_0299 + 22887603-22887797,22887891-22887986,22888089-228881... 69 5e-12
04_03_0447 + 16015043-16015489,16017358-16017530,16017906-160180... 60 2e-09
04_03_0436 + 15918144-15918377,15918514-15918717,15918813-15918911 60 2e-09
04_03_0439 + 15937934-15938167,15938276-15938476,15938852-159389... 58 1e-08
04_01_0350 - 4610444-4610668,4612181-4612969 42 4e-04
01_06_1338 + 36411536-36411646,36411738-36411791,36411898-364119... 41 0.001
04_03_0435 + 15902356-15902574,15902680-15902777,15905100-159051... 39 0.005
10_01_0066 + 848523-849269,849520-849741 38 0.009
05_05_0196 + 23152389-23152658,23153042-23153092,23153167-231532... 38 0.011
10_01_0065 + 845447-846187,846969-847193 35 0.060
09_03_0022 + 11610691-11610760,11611153-11611564,11613581-11614109 31 0.74
06_02_0101 - 11816507-11816878,11817571-11817840,11818014-118180... 31 0.74
09_02_0587 - 10948888-10949124,10949281-10949393,10949830-109502... 31 1.3
03_01_0100 - 791425-792996 31 1.3
07_01_0316 + 2226010-2226256,2226956-2227047,2227143-2227180,222... 30 2.3
05_05_0085 - 22265143-22265226,22265294-22265602,22266915-222671... 29 3.9
06_02_0099 - 11730617-11730988,11731423-11731692,11732509-11732904 29 5.2
09_03_0005 + 11411828-11411894,11412122-11412677,11413424-11413433 28 6.9
03_06_0696 - 35603763-35603941,35605272-35605737 28 6.9
01_07_0314 - 42688284-42688517,42688587-42688655,42688881-426890... 28 6.9
01_06_0238 - 27774546-27775418 28 6.9
02_05_0739 + 31401372-31402371,31402667-31402719 28 9.1
>12_02_0351 -
17829874-17830005,17830250-17830267,17830544-17830672,
17831037-17831336,17831447-17831675,17831762-17831989,
17832380-17832645
Length = 433
Score = 136 bits (329), Expect = 2e-32
Identities = 69/181 (38%), Positives = 108/181 (59%), Gaps = 4/181 (2%)
Frame = +1
Query: 25 NMRYNELGTTGIKVSHISVGSAAFSNIYGKYDEKRSLELIKESLNLGINYLETGPWYGQG 204
+M ELG TG++VS + G++ +++G + ++ +L+LGIN+ +T P+YG
Sbjct: 111 DMELRELGATGLRVSPVGFGASPLGHVFGDVPRDVARAAVRRALDLGINFFDTSPYYGGT 170
Query: 205 SSEKVIGKAL--VGVPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGLDYV 378
SE V+G L GVPRD + + +K GRY + FDFSA + +D +L+ LGLDYV
Sbjct: 171 VSESVLGDCLRAAGVPRDRFVVATKCGRYREG----FDFSAARVTRSVDESLARLGLDYV 226
Query: 379 DLIQVHDITFAPDTSVVLKETLPVLEQAVRDGKARFIGIADYDIDLMKEVVEE--SGSQD 552
D++ HDI F D ++ ET+PVL++ GKARFIGI + + V+++ GS D
Sbjct: 227 DILHCHDIEFT-DLDQIVNETIPVLQKIKESGKARFIGITGLPLSIYTYVLDQVPPGSVD 285
Query: 553 I 555
+
Sbjct: 286 V 286
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +3
Query: 591 DNRLQNYISFFKSXGVGVINAAATGMGLLTNKXPQPWHXXRDDXKAXCRXASD 749
D L + + + KS GVGVI+A+ MGLLT+ P WH + K CR A+D
Sbjct: 297 DTALVDLLPYLKSKGVGVISASPLAMGLLTDNGPPEWHPAPKELKLACRAAAD 349
>10_08_0021 +
14217455-14217505,14217742-14217909,14219137-14219340,
14219429-14219601,14219970-14220066,14220183-14220336,
14222029-14222209,14222858-14222898,14223146-14223231,
14223282-14223389,14223538-14223579
Length = 434
Score = 81.4 bits (192), Expect = 7e-16
Identities = 45/163 (27%), Positives = 87/163 (53%), Gaps = 2/163 (1%)
Frame = +1
Query: 40 ELGTTGIKVSHISVGSAAFSNIYGK-YDEKRSLELIKESLNLGINYLETGPWYGQGSSEK 216
+LGT G++VS + G + +Y E+ + +++ + G+ + +T YG ++E
Sbjct: 10 KLGTQGLEVSKLGFGCMGLTGVYNAPVAEEDGVAVVRRAFEAGVTFFDTSDAYGPHTNEV 69
Query: 217 VIGKALVGVPRDSYYIGSKVGRYDKDTLKMF-DFSAEKTAAGLDNTLSLLGLDYVDLIQV 393
++GKAL +PR+ + +K G D M + + A + +L L +DY+DL
Sbjct: 70 LLGKALKQLPREKVQVATKFGIAGFDANGMLVKGTPDYVRACCEASLERLAVDYIDLYYQ 129
Query: 394 HDITFAPDTSVVLKETLPVLEQAVRDGKARFIGIADYDIDLMK 522
H I D SV ++ET+ L++ V +GK +F+G+++ D ++
Sbjct: 130 HRI----DQSVPIEETMGELKKLVEEGKVKFVGLSEASADTIR 168
>04_03_0438 +
15929220-15929453,15929564-15929764,15930874-15931046,
15931131-15931233,15931763-15932107
Length = 351
Score = 74.5 bits (175), Expect = 8e-14
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
Frame = +1
Query: 7 ASPQSFNMRYNELGTTGIKVSHISVGSAAFSNIYGK-YDEKRSLELIKESLNLGINYLET 183
A+P + +R +LG+ G++VS +G S YG E + LI ++ G+ L+T
Sbjct: 4 AAPATAAVRRMKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMVALIHHAVAAGVTLLDT 63
Query: 184 GPWYGQGSSEKVIGKALVGVPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLL 363
YG ++E ++GKAL G RD + +K G +D + A + +L L
Sbjct: 64 SDIYGPHTNELLLGKALQGGVRDKVELATKFGIAFEDGKRDVRGDPAYVRAACEGSLRRL 123
Query: 364 GLDYVDLIQVHDITFAPDTSVVLKETLPVLEQAVRDGKARFIGIAD 501
G+D +DL H + D V ++ T+ L++ V +GK ++IG+++
Sbjct: 124 GVDSIDLYYQHRV----DKKVPIEVTIGELKKLVEEGKIKYIGLSE 165
>01_05_0718 -
24575946-24576121,24576721-24576874,24576964-24577060,
24577142-24577314,24577426-24577629,24577725-24577892,
24577938-24578084
Length = 372
Score = 74.1 bits (174), Expect = 1e-13
Identities = 42/157 (26%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
Frame = +1
Query: 58 IKVSHISVGSAAFSNIYGK-YDEKRSLELIKESLNLGINYLETGPWYGQGSSEKVIGKAL 234
+ VS + G + Y D+ +I + G+ + +T YG ++E ++GKAL
Sbjct: 48 VTVSKLGFGCMGLTGAYNSPLDDDAGAAVIAHAFRRGVTFFDTSDVYGPLANEILLGKAL 107
Query: 235 VGVPRDSYYIGSKVG-RYDKDTLKMFDFSAEKTAAGLDNTLSLLGLDYVDLIQVHDITFA 411
+PR+ + +K G R D ++ E A + +L LG+DY+DL H +
Sbjct: 108 KQLPREQVQVATKFGIRRGADGVRAVCGRPEYVRACCEASLGRLGVDYIDLYYQHRV--- 164
Query: 412 PDTSVVLKETLPVLEQAVRDGKARFIGIADYDIDLMK 522
DT++ +++T+ L++ V +GK R+IG+++ D ++
Sbjct: 165 -DTTIPIEDTIGELKKLVEEGKVRYIGLSEASPDTIR 200
>03_05_0299 +
22887603-22887797,22887891-22887986,22888089-22888172,
22888573-22888733,22889458-22889575,22889914-22890049,
22890351-22890529,22890690-22890929
Length = 402
Score = 68.5 bits (160), Expect = 5e-12
Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 26/191 (13%)
Frame = +1
Query: 7 ASPQSFNMRYNELGTTGIKVSHISVGSAAFSNIYGKYDEKRSLELIKESLNLGINYLETG 186
A QS M+Y +LG + + +S +++G+ F + EK + +++ S + G+N L+T
Sbjct: 40 AQAQS-QMQYRKLGDSDLVISEVTLGTMTFGE---QNTEKEAHDILSYSFDQGVNILDTA 95
Query: 187 PWYG-------QGSSEKVIGKALVGVPRDSYYIGSKVGRYD------KDTLKMFDFSAEK 327
Y QG ++ IG + PRD + +KV Y +D K+ A
Sbjct: 96 EMYPVPPRKETQGRTDLYIGSWMQSKPRDKIILATKVSGYSERSTFLRDNAKVVRVDAAN 155
Query: 328 TAAGLDNTLSLLGLDYVDLIQVH----------DITFAPD---TSVVLKETLPVLEQAVR 468
++ +LS L DY+DL+Q+H + + P SV +E L ++ +
Sbjct: 156 IKESVEKSLSRLSTDYIDLLQIHWPDRYVPLFGEYCYNPTKWRPSVPFEEQLKAFQELID 215
Query: 469 DGKARFIGIAD 501
+GK R+IG+++
Sbjct: 216 EGKVRYIGVSN 226
>04_03_0447 +
16015043-16015489,16017358-16017530,16017906-16018008,
16018177-16018521
Length = 355
Score = 60.1 bits (139), Expect = 2e-09
Identities = 40/166 (24%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Frame = +1
Query: 10 SPQSFNMRYNELGTTGIKVSHISVGSAAFSNIYG-KYDEKRSLELIKESLNLGINYLETG 186
+P + +R +LG+ G++VS +G S +YG + E + L++ ++ G+ +L+T
Sbjct: 8 APAAAVVRRMKLGSQGMEVSAQGLGCMGMSAVYGERKPEADMVALVRHAVAAGVTFLDTS 67
Query: 187 PWYGQGSSEKVIGKALVGVPRDSYYIGSKVG-RYDKDTLKMFDFSAEKTAAGLDNTLSLL 363
YG ++E ++GKA+ + +V ++ A + +L L
Sbjct: 68 DVYGPHTNEVLVGKAVAAAAATEEEVQVQVATKFGITPAWEVRGDPAYVRAACEGSLRRL 127
Query: 364 GLDYVDLIQVHDITFAPDTSVVLKETLPVLEQAVRDGKARFIGIAD 501
G+ +DL H I D++V ++ T+ L++ V +GK ++IG+++
Sbjct: 128 GVGCIDLYYQHRI----DSTVPVEITMGELKKLVEEGKIKYIGLSE 169
>04_03_0436 + 15918144-15918377,15918514-15918717,15918813-15918911
Length = 178
Score = 59.7 bits (138), Expect = 2e-09
Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 2/134 (1%)
Frame = +1
Query: 7 ASPQSFNMRYNELGTTGIKVSHISVGSAAFSNIYG-KYDEKRSLELIKESLNLGINYLET 183
A+P + +R +LG+ G++VS +G S +G E + LI ++ G+ L+T
Sbjct: 4 AAPATAAVRRVKLGSQGLEVSAQGLGCMGMSAFHGPSKPEADMVALIHHAVAAGVTLLDT 63
Query: 184 GPWYGQGSSEKVIGKAL-VGVPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSL 360
YG ++E ++GKAL VG RD+ + +K G++ D A + +L
Sbjct: 64 ADIYGPHANEALLGKALQVGSVRDNVALATKFGKFLADGKVGIRGDPAYVRAACEGSLQR 123
Query: 361 LGLDYVDLIQVHDI 402
LG+D +DL H +
Sbjct: 124 LGVDCIDLYYQHRV 137
>04_03_0439 +
15937934-15938167,15938276-15938476,15938852-15938911,
15939896-15939958,15940822-15940848,15941020-15941358
Length = 307
Score = 57.6 bits (133), Expect = 1e-08
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Frame = +1
Query: 7 ASPQSFNMRYNELGTTGIKVSHISVGSAAFSNIYGK-YDEKRSLELIKESLNLGINYLET 183
A+P + +R +LG+ G++VS +G S YG E + LI ++ G+ +L+T
Sbjct: 4 AAPATAAVRRMKLGSQGLEVSAQGLGCMGMSAFYGPPKPEADMVALIHHAVAAGVTHLDT 63
Query: 184 GPWYGQGSSEKVIGKALVGVPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLL 363
YG ++E ++GKAL G R+ + +K D A + +L L
Sbjct: 64 SDMYGPHTNELLLGKALQGGVREKVEVATKFAVSFADGKVEIRGDPAYVRAACEGSLRRL 123
Query: 364 GLDYVDLIQVHDI 402
G+D VDL H +
Sbjct: 124 GVDCVDLYYQHRV 136
>04_01_0350 - 4610444-4610668,4612181-4612969
Length = 337
Score = 42.3 bits (95), Expect = 4e-04
Identities = 28/85 (32%), Positives = 41/85 (48%)
Frame = +1
Query: 142 IKESLNLGINYLETGPWYGQGSSEKVIGKALVGVPRDSYYIGSKVGRYDKDTLKMFDFSA 321
I ++ LG +L+T YG +E +G A+ R + S+ + L M D
Sbjct: 51 IAHAVRLGYRHLDTAAVYG---TEGAVGAAVAEAVRCGA-VASRGELFVTTKLSMADAHP 106
Query: 322 EKTAAGLDNTLSLLGLDYVDLIQVH 396
+ A L +LS LGLDYVDL +H
Sbjct: 107 PRVVAALRESLSRLGLDYVDLFLIH 131
>01_06_1338 +
36411536-36411646,36411738-36411791,36411898-36411974,
36412108-36412195,36412289-36412561,36412651-36412968
Length = 306
Score = 41.1 bits (92), Expect = 0.001
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Frame = +1
Query: 136 ELIKESLNLGINYLETGPWYGQGSSEKVIGKALVGVPRDSYYIGSKVGRYDKDTLKMFDF 315
+++ ++ G +++ P Y + ++VIG AL + D + + + + D
Sbjct: 30 DVVSAAVKAGYRHIDCAPLYK--NEQEVIGGALKKLFDDG--VVKREDLFITSKIWCSDL 85
Query: 316 SAEKTAAGLDNTLSLLGLDYVDLIQVH-------DITFAPDTSVV--LKETLPVLEQAVR 468
+ E +D+TL L LDYVDL +H +P+ V + T +EQ
Sbjct: 86 APEDVPLAMDSTLKDLQLDYVDLYLIHWPFQIKKGTELSPENFVKPDIPSTWRAMEQLYD 145
Query: 469 DGKARFIGIADY 504
GKAR IG++++
Sbjct: 146 SGKARAIGVSNF 157
>04_03_0435 +
15902356-15902574,15902680-15902777,15905100-15905163,
15906707-15907045
Length = 239
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = +1
Query: 40 ELGTTGIKVSHISVGSAAFSNIYGK-YDEKRSLELIKESLNLGINYLETGPWYGQGSSEK 216
+LG+ G++VS +G + E + LI+ ++ G+ + +T YG ++E
Sbjct: 10 KLGSQGMEVSAQGLGCMGMCPAFEPPKPEADMVALIRHAIAAGVTFFDTSDLYGPHTNEV 69
Query: 217 VIGKALV-GVPRDSYYIGSKVGRY 285
++GKAL G RD + +K G++
Sbjct: 70 LLGKALQGGGVRDRVELATKFGKF 93
>10_01_0066 + 848523-849269,849520-849741
Length = 322
Score = 37.9 bits (84), Expect = 0.009
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Frame = +1
Query: 73 ISVGSAAFSNIYGKYDEKRSLELIKESLNLGINYLETGPWYGQGSSEKVIGKALVGVPRD 252
I +G+AAF E+ + L++ ++ LG + +T Y ++E + +A+ R
Sbjct: 21 IGMGTAAFPFTSS---EETTAALLR-AIELGYRHFDTARLY---ATEGCVSEAVAEAVRR 73
Query: 253 SYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGLDYVDLIQVH-DITFAP---DT 420
+ S+ + L D A + TL LG+DYVDL+ VH T AP D
Sbjct: 74 GL-VASRADVFVTSKLWCSDLHAGRVVPAARETLRNLGMDYVDLLLVHWPATVAPGSYDF 132
Query: 421 SVVLKETLPV---------LEQAVRDGKARFIGIADYDIDLMKEVV 531
+E P +E+ R G AR IG++++ +++++
Sbjct: 133 PFPKEEMAPAFDMEGVWRGMEECHRLGLARAIGVSNFSAKKLEQLL 178
>05_05_0196 +
23152389-23152658,23153042-23153092,23153167-23153240,
23153356-23153443,23153541-23153738,23153824-23153895,
23154034-23154093,23154194-23154370,23154975-23155064
Length = 359
Score = 37.5 bits (83), Expect = 0.011
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 16/150 (10%)
Frame = +1
Query: 139 LIKESLNLGINYLETGPWYGQGSSEKVIGKAL-----VGVPRDSYYIGSKVGRYDKDTLK 303
LI L G +++T YG E+ +GK L G+ R ++ SK+
Sbjct: 84 LIVNHLQAGYRHVDTAAQYG---IEQEVGKGLKAAMEAGINRKDLFVTSKIW-------- 132
Query: 304 MFDFSAEKTAAGLDNTLSLLGLDYVDLIQVH-------DITFAPDTSVVLKETLPV---- 450
+ + E+ L NTL L LDY+DL +H P+ VL+ +
Sbjct: 133 CTNLAPERVRPALKNTLKDLQLDYIDLYLIHWPFRLKDGAHQPPEAGEVLEFDMEAVWRE 192
Query: 451 LEQAVRDGKARFIGIADYDIDLMKEVVEES 540
+E+ V DG + IG+ ++ + + +++ +
Sbjct: 193 MERLVTDGLVKDIGVCNFSVTKLNRLLQSA 222
>10_01_0065 + 845447-846187,846969-847193
Length = 321
Score = 35.1 bits (77), Expect = 0.060
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Frame = +1
Query: 73 ISVGSAAFSNIYGKYDEKRSLELIKESLNLGINYLETGPWYGQGSSEKVIGKALVGVPRD 252
+ +G+AAF + ++ + L ++ LG + +T Y ++E +G+A+ R
Sbjct: 19 VGMGTAAFP--FTSSEDTTAAML--RAIELGYRHFDTARIY---ATEGCVGEAVAEAVRR 71
Query: 253 SYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGLDYVDLIQVH-DITFAP---DT 420
I S+ + + D A + TL LG+DYVDL+ VH ++ P D
Sbjct: 72 GL-IASRADVFVTSKIWCSDLHAGRVVPAARETLRNLGMDYVDLLLVHWPVSLTPGNYDF 130
Query: 421 SVVLKETLPV---------LEQAVRDGKARFIGIADYDIDLMKEVV 531
+ LP +E+ R G AR IG++++ +++++
Sbjct: 131 PFPKEVILPSFDMEGVWRGMEECHRLGLARAIGVSNFSAKKLEQLL 176
>09_03_0022 + 11610691-11610760,11611153-11611564,11613581-11614109
Length = 336
Score = 31.5 bits (68), Expect = 0.74
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 103 IYGKYDEKRSLELIKESLNLGINYLET 183
+YG YD K S ++ L+LG+NY +T
Sbjct: 73 VYGNYDGKNSSSTLQFDLHLGVNYWKT 99
>06_02_0101 -
11816507-11816878,11817571-11817840,11818014-11818076,
11818610-11819002
Length = 365
Score = 31.5 bits (68), Expect = 0.74
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 5/124 (4%)
Frame = +1
Query: 223 GKALVGVPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGLDYVDLIQVHDI 402
G +G S+ + ++ +D +E+ +G L+ LG +++ D+
Sbjct: 166 GNICIGKATPSHVVKLFQKKFKEDFSLFLALRSEELVSGGCMVLTFLGRKSSEMLAHGDV 225
Query: 403 TFAPDTS-VVLKETLPVLEQA--VRDGKARFIGIADY--DIDLMKEVVEESGSQDINHTL 567
DT +L E L +L Q V++ + Y +D + E++EESG D+ HT
Sbjct: 226 ----DTMWELLAEALQILVQKGRVKEEDLTTFNLPFYAPSVDEVTELIEESGLFDVEHTG 281
Query: 568 LFRS 579
+F S
Sbjct: 282 VFES 285
>09_02_0587 -
10948888-10949124,10949281-10949393,10949830-10950293,
10951223-10951766,10951902-10951971
Length = 475
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +1
Query: 106 YGKYDEKRSLELIKESLNLGINYLET--GPW 192
YG YD K S I+ L LG+NY T PW
Sbjct: 108 YGNYDGKNSSSTIQFDLYLGVNYWATVKDPW 138
>03_01_0100 - 791425-792996
Length = 523
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1
Query: 478 ARFIGIADYDIDLMKEVVEESGSQDINHTLLFRSPRSSI 594
ARF+G YD+DL + +GS D+ LL +PRS I
Sbjct: 252 ARFLGYDIYDVDLSR-----AGSDDLRALLLHTTPRSLI 285
>07_01_0316 +
2226010-2226256,2226956-2227047,2227143-2227180,
2227289-2227450,2227540-2227562,2227673-2227744,
2227858-2228025,2228318-2228400,2228533-2228595,
2228735-2228917
Length = 376
Score = 29.9 bits (64), Expect = 2.3
Identities = 39/196 (19%), Positives = 84/196 (42%), Gaps = 16/196 (8%)
Frame = +1
Query: 43 LGTTGIKVSHISVGSAAFSNIY----GKYDEKRSLEL---IKESLNLGINYLETGPWYGQ 201
LG + + VS + +G+ ++ + ++D++R E S++ G+ +T YG
Sbjct: 53 LGGSEVAVSKLGIGAWSWGDTTYWNDSEWDDRRLQEAKAAFDTSIDNGMTLFDTAEVYGT 112
Query: 202 GSSEKVIGKALVG--VPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGLDY 375
V ++L+G + V K + F + L +L LGL
Sbjct: 113 ALMGAVNSESLLGGFIKERQEKEQIDVAVATKFAALPWRFGRGSVLSALKKSLDRLGLSS 172
Query: 376 VDLIQVHDITFAPDTSVVLKETLPVLEQAVRDGKARFIGIADYDIDLMKEV---VEESG- 543
V+L Q+H + L L A G + +G+++Y+ +++ +++ G
Sbjct: 173 VELYQLHWPGLWGNEGY-----LDGLADAYEQGLVKAVGVSNYNEKRLRDAYARMKKRGV 227
Query: 544 ---SQDINHTLLFRSP 582
+ +N++L++R+P
Sbjct: 228 PLAANQVNYSLIYRTP 243
>05_05_0085 -
22265143-22265226,22265294-22265602,22266915-22267187,
22267413-22267500,22267620-22267696,22267791-22267841,
22267967-22268077
Length = 330
Score = 29.1 bits (62), Expect = 3.9
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Frame = +1
Query: 208 SEKVIGKALVGVPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGLDYVDLI 387
+EK IG AL V + I + + L + + E LD+TL L DYVDL
Sbjct: 51 NEKEIGVALKKVFDEG--IVKREDIFITSKLWCTNHAPEDVPVALDSTLQDLQTDYVDLY 108
Query: 388 QVH-DITFAPDTSVVLKETLP--------VLEQAVRDGKARFIGIADYDIDLMKEVV 531
+H + + LP +E+ GKAR IG++++ +++++
Sbjct: 109 LIHWPVRMKKGAGFGGQNVLPTDIPATWAAMEKLHDSGKARAIGVSNFSSKKLEDLL 165
>06_02_0099 - 11730617-11730988,11731423-11731692,11732509-11732904
Length = 345
Score = 28.7 bits (61), Expect = 5.2
Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 4/123 (3%)
Frame = +1
Query: 223 GKALVGVPRDSYYIGSKVGRYDKDTLKMFDFSAEKTAAGLDNTLSLLGLDYVDLIQVHDI 402
G +G S+ + ++ +D E+ +G L+ LG ++ D+
Sbjct: 146 GNIYIGKATPSHVVKLFQKKFKEDFSLFLTLRQEELVSGGRMVLTFLGRKSSQMLAHGDV 205
Query: 403 TFAPDTSVVLKETLPVLEQA--VRDGKARFIGIADY--DIDLMKEVVEESGSQDINHTLL 570
+ +L + L +L Q V++ + Y +D + E++EESG D+ HT +
Sbjct: 206 GTMWE---LLAQALQILVQKGRVKEEDLTTFNLPFYAPSVDEVTELIEESGLFDVEHTGV 262
Query: 571 FRS 579
F S
Sbjct: 263 FES 265
>09_03_0005 + 11411828-11411894,11412122-11412677,11413424-11413433
Length = 210
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 106 YGKYDEKRSLELIKESLNLGINYLET 183
YG YD K S ++ L+LG NY +T
Sbjct: 107 YGNYDGKNSSSSLQFDLHLGSNYWDT 132
>03_06_0696 - 35603763-35603941,35605272-35605737
Length = 214
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 561 YSLISKSTLFDNRLQNYISFFKSXGVGVINAAATGMGLL 677
Y L + +DN N SFF + +AA G+G+L
Sbjct: 68 YQLAADEPFYDNEWNNGTSFFYTPARRACRSAAVGVGIL 106
>01_07_0314 -
42688284-42688517,42688587-42688655,42688881-42689001,
42689196-42689371,42689473-42689574,42690376-42691320
Length = 548
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 433 KETLPVLEQAVRDGKARFIGIADYDIDLMKEVVEESG 543
+ET VLE R GKA G A++D +K+ + +G
Sbjct: 211 EETAEVLEGWFRSGKAAMAGKAEWDACKVKDAIVANG 247
>01_06_0238 - 27774546-27775418
Length = 290
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = -1
Query: 546 TSGLLYYFLHQVDIIVSDPNEASFSISHGLLQHWQRLFEYNRSVRSKS 403
+ G + ++H+ D+ +DP++ + S + R + + +VRSKS
Sbjct: 35 SGGNPWRYVHEADVYAADPDDLTGKYSPAVASDGSRAWYFFTTVRSKS 82
>02_05_0739 + 31401372-31402371,31402667-31402719
Length = 350
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +1
Query: 109 GKYDEKRSLELIKESLNLGINYLETGPWYGQGSSEKVIGKALVGVPRDSYYIGSKVGRYD 288
GK E + + + LNL IN+ G G+ E+ GK + + + GS G++
Sbjct: 140 GKQFESGKFQDMCKGLNLQINFASVGHPQTNGAVERANGKIMEAIKK--RLEGSAKGKWP 197
Query: 289 KDTLKM 306
+D L +
Sbjct: 198 EDLLSV 203
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,683,361
Number of Sequences: 37544
Number of extensions: 368584
Number of successful extensions: 971
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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