Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2008
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.           25   3.3  
AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.           25   3.3  
AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.           25   3.3  
AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.           25   3.3  
L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     24   5.8  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   7.6  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   7.6  

>AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2

Query: 269 RSQMDSLLAGLPKKEMTAMALGLAHSLSRYKLKFSPDKI 385
           R+  DS+L GL  K +TA    L H L+        D++
Sbjct: 4   RNVTDSILEGLEYKTLTAKLDYLQHKLTVMDYSLKEDRV 42


>AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2

Query: 269 RSQMDSLLAGLPKKEMTAMALGLAHSLSRYKLKFSPDKI 385
           R+  DS+L GL  K +TA    L H L+        D++
Sbjct: 4   RNVTDSILEGLEYKTLTAKLDYLQHKLTVIDYSLKEDRV 42


>AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2

Query: 269 RSQMDSLLAGLPKKEMTAMALGLAHSLSRYKLKFSPDKI 385
           R+  DS+L GL  K +TA    L H L+        D++
Sbjct: 4   RNVTDSILEGLEYKTLTAKLDYLQHKLTVMDYSLKEDRV 42


>AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2

Query: 269 RSQMDSLLAGLPKKEMTAMALGLAHSLSRYKLKFSPDKI 385
           R+  DS+L GL  K +TA    L H L+        D++
Sbjct: 4   RNVTDSILEGLEYKTLTAKLDYLQHKLTVMDYSLKEDRV 42


>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 313 NDSYGFGPGSLSFEVQ 360
           N +YGF PGS +F  Q
Sbjct: 236 NTAYGFAPGSRAFLAQ 251


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +2

Query: 242 NVQELLR-CIRSQMDSLLAGLPKKEMTAMALGLAHSLSRYKLKFSP 376
           N  ++LR CI+ ++  L+    K ++    L +  S   YKL++ P
Sbjct: 48  NTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWEP 93


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +2

Query: 242 NVQELLR-CIRSQMDSLLAGLPKKEMTAMALGLAHSLSRYKLKFSP 376
           N  ++LR CI+ ++  L+    K ++    L +  S   YKL++ P
Sbjct: 48  NTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWEP 93


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,443
Number of Sequences: 2352
Number of extensions: 11960
Number of successful extensions: 68
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)